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Mouse SNP Summary
Symbol
Name
ID 		Rr548612
regulatory region 548612
MGI:8010744

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226956375
MGI SNP Detail
Alliance Variant		 Chr19:45887373 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1997 bp proximal
 SNP G G G
rs256790670
MGI SNP Detail
Alliance Variant		 Chr19:45887504 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1866 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216886773
MGI SNP Detail
Alliance Variant		 Chr19:45887507 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1863 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs237679964
MGI SNP Detail
Alliance Variant		 Chr19:45887516 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1854 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs36306977
MGI SNP Detail
Alliance Variant		 Chr19:45887551 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1819 bp proximal
 SNP A/C A A A A A A A A A A C A A C A
rs38304964
MGI SNP Detail
Alliance Variant		 Chr19:45887562 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1808 bp proximal
 SNP A/G G G A G G G G G G A A G A A G A A
rs36611054
MGI SNP Detail
Alliance Variant		 Chr19:45887716 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1654 bp proximal
 SNP G/T T T G T T T G T T G G G G G G G G
rs248110067
MGI SNP Detail
Alliance Variant		 Chr19:45887717 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1653 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220033229
MGI SNP Detail
Alliance Variant		 Chr19:45887730 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1640 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246007404
MGI SNP Detail
Alliance Variant		 Chr19:45887797 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1573 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs38688091
MGI SNP Detail
Alliance Variant		 Chr19:45887842 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1528 bp proximal
 SNP C/G G G G G G G C G G G G G C G
rs581491946
MGI SNP Detail
Alliance Variant		 Chr19:45887880 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1490 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs36527516
MGI SNP Detail
Alliance Variant		 Chr19:45887892 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1478 bp proximal
 SNP G/T G G G G G G T G G G T G G T G
rs36727580
MGI SNP Detail
Alliance Variant		 Chr19:45887917 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1453 bp proximal
 SNP G/T G G G G G G T G G G T G G T G
rs224385629
MGI SNP Detail
Alliance Variant		 Chr19:45887949 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1421 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs248575228
MGI SNP Detail
Alliance Variant		 Chr19:45887955 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1415 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585198904
MGI SNP Detail
Alliance Variant		 Chr19:45887970 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1400 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224063974
MGI SNP Detail
Alliance Variant		 Chr19:45887995 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1375 bp proximal
 SNP C/T T C
rs579392134
MGI SNP Detail
Alliance Variant		 Chr19:45887997 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1373 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225193920
MGI SNP Detail
Alliance Variant		 Chr19:45888025 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1345 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs39278388
MGI SNP Detail
Alliance Variant		 Chr19:45888039 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1331 bp proximal
 SNP A/G G G G G G G G G G G A G G A G
rs36357118
MGI SNP Detail
Alliance Variant		 Chr19:45888053 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1317 bp proximal
 SNP C/T C C C C C C T C C C C C C
rs37447676
MGI SNP Detail
Alliance Variant		 Chr19:45888075 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1295 bp proximal
 SNP A/G G G G G G G A G G G G G A G
rs36896533
MGI SNP Detail
Alliance Variant		 Chr19:45888089 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1281 bp proximal
 SNP C/T C C C C C C T C C C C C T C
rs216356386
MGI SNP Detail
Alliance Variant		 Chr19:45888110 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1260 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36495888
MGI SNP Detail
Alliance Variant		 Chr19:45888130 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1240 bp proximal
 SNP C/T T T T T T C T T C C C C C C
rs254451342
MGI SNP Detail
Alliance Variant		 Chr19:45888135 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1235 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C A C
rs36395769
MGI SNP Detail
Alliance Variant		 Chr19:45888147 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1223 bp proximal
 SNP C/T T T C T T T T T T C C T C C T C
rs36487420
MGI SNP Detail
Alliance Variant		 Chr19:45888164 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1206 bp proximal
 SNP C/G G G G G G G C G G G G G G G
rs248078866
MGI SNP Detail
Alliance Variant		 Chr19:45888169 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1201 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220008355
MGI SNP Detail
Alliance Variant		 Chr19:45888202 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1168 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236216432
MGI SNP Detail
Alliance Variant		 Chr19:45888225 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1145 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs40314831
MGI SNP Detail
Alliance Variant		 Chr19:45888230 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1140 bp proximal
 SNP A/G G G G G G G A G G G A G G A G
rs224323875
MGI SNP Detail
Alliance Variant		 Chr19:45888234 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1136 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251440899
MGI SNP Detail
Alliance Variant		 Chr19:45888260 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1110 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs260736079
MGI SNP Detail
Alliance Variant		 Chr19:45888275 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1095 bp proximal
 SNP A/C/G G G G G G G G G G G G G G G G G G G G A G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219038281
MGI SNP Detail
Alliance Variant		 Chr19:45888277 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1093 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237478251
MGI SNP Detail
Alliance Variant		 Chr19:45888281 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1089 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258625072
MGI SNP Detail
Alliance Variant		 Chr19:45888285 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1085 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs230669954
MGI SNP Detail
Alliance Variant		 Chr19:45888296 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1074 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs36269839
MGI SNP Detail
Alliance Variant		 Chr19:45888306 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1064 bp proximal
 SNP C/T C C C C C C T C C C C C C
rs265606362
MGI SNP Detail
Alliance Variant		 Chr19:45888319 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1051 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs231314770
MGI SNP Detail
Alliance Variant		 Chr19:45888325 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 1045 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259806702
MGI SNP Detail
Alliance Variant		 Chr19:45888395 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 975 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37623412
MGI SNP Detail
Alliance Variant		 Chr19:45888401 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 969 bp proximal
 SNP G/T G G G G G G T G G G G G G G G
rs39018345
MGI SNP Detail
Alliance Variant		 Chr19:45888410 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 960 bp proximal
 SNP C/T C C C C C C C C C C T C C T C
rs242173288
MGI SNP Detail
Alliance Variant		 Chr19:45888455 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 915 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214326211
MGI SNP Detail
Alliance Variant		 Chr19:45888491 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 879 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37019521
MGI SNP Detail
Alliance Variant		 Chr19:45888496 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 874 bp proximal
 SNP C/T C C T C C C C C C T T C T T C T T
rs36561065
MGI SNP Detail
Alliance Variant		 Chr19:45888499 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 871 bp proximal
 SNP A/G G G G G G G G G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38437372
MGI SNP Detail
Alliance Variant		 Chr19:45888519 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 851 bp proximal
 SNP C/G C C G C C C C C C G G G G G G G G
rs240357836
MGI SNP Detail
Alliance Variant		 Chr19:45888575 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 795 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37057840
MGI SNP Detail
Alliance Variant		 Chr19:45888595 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 775 bp proximal
 SNP C/T T C T C T T T C T T T T T T T T T
rs219006303
MGI SNP Detail
Alliance Variant		 Chr19:45888652 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 718 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237456911
MGI SNP Detail
Alliance Variant		 Chr19:45888654 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 716 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252310635
MGI SNP Detail
Alliance Variant		 Chr19:45888672 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 698 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222801186
MGI SNP Detail
Alliance Variant		 Chr19:45888704 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 666 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249476869
MGI SNP Detail
Alliance Variant		 Chr19:45888724 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 646 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232795097
MGI SNP Detail
Alliance Variant		 Chr19:45888725 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 645 bp proximal
 SNP G G G
rs38874353
MGI SNP Detail
Alliance Variant		 Chr19:45888769 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 601 bp proximal
 SNP A/C C C C C C C A C C C C C C C C
rs585082606
MGI SNP Detail
Alliance Variant		 Chr19:45888779 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 591 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37413956
MGI SNP Detail
Alliance Variant		 Chr19:45888800 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 570 bp proximal
 SNP G/T T T T T T T G T T T T T T T T
rs36825273
MGI SNP Detail
Alliance Variant		 Chr19:45888834 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 536 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs258639652
MGI SNP Detail
Alliance Variant		 Chr19:45888842 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 528 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs39789828
MGI SNP Detail
Alliance Variant		 Chr19:45888868 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 502 bp proximal
 SNP C/T C C C C C C T C C C T C C T C
rs242142031
MGI SNP Detail
Alliance Variant		 Chr19:45888873 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 497 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214885030
MGI SNP Detail
Alliance Variant		 Chr19:45888882 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 488 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229664995
MGI SNP Detail
Alliance Variant		 Chr19:45888929 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 441 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258118831
MGI SNP Detail
Alliance Variant		 Chr19:45888952 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 418 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36822584
MGI SNP Detail
Alliance Variant		 Chr19:45888961 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 409 bp proximal
 SNP A/T A A A A A A A A A A T A A T A
rs243062348
MGI SNP Detail
Alliance Variant		 Chr19:45888966 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 404 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582080445
MGI SNP Detail
Alliance Variant		 Chr19:45888967 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 403 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254488481
MGI SNP Detail
Alliance Variant		 Chr19:45888972 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 398 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582437129
MGI SNP Detail
Alliance Variant		 Chr19:45888973 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 397 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579571428
MGI SNP Detail
Alliance Variant		 Chr19:45888975 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 395 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582077611
MGI SNP Detail
Alliance Variant		 Chr19:45888976 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 394 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586362703
MGI SNP Detail
Alliance Variant		 Chr19:45888982 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 388 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580640785
MGI SNP Detail
Alliance Variant		 Chr19:45888983 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 387 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212991860
MGI SNP Detail
Alliance Variant		 Chr19:45888988 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 382 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583607645
MGI SNP Detail
Alliance Variant		 Chr19:45888999 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 371 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587218101
MGI SNP Detail
Alliance Variant		 Chr19:45889007 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 363 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579756061
MGI SNP Detail
Alliance Variant		 Chr19:45889023 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 347 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583234129
MGI SNP Detail
Alliance Variant		 Chr19:45889031 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 339 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587032986
MGI SNP Detail
Alliance Variant		 Chr19:45889037 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 333 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580603852
MGI SNP Detail
Alliance Variant		 Chr19:45889103 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 267 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs229959283
MGI SNP Detail
Alliance Variant		 Chr19:45889166 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 204 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252174272
MGI SNP Detail
Alliance Variant		 Chr19:45889181 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 189 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs222362881
MGI SNP Detail
Alliance Variant		 Chr19:45889281 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 89 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs246695174
MGI SNP Detail
Alliance Variant		 Chr19:45889294 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 76 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263072569
MGI SNP Detail
Alliance Variant		 Chr19:45889314 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 56 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs227128122
MGI SNP Detail
Alliance Variant		 Chr19:45889347 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 23 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241207682
MGI SNP Detail
Alliance Variant		 Chr19:45889398 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs258599113
MGI SNP Detail
Alliance Variant		 Chr19:45889451 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223937430
MGI SNP Detail
Alliance Variant		 Chr19:45889460 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs235598283
MGI SNP Detail
Alliance Variant		 Chr19:45889475 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G C G G G G
rs36427312
MGI SNP Detail
Alliance Variant		 Chr19:45889501 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP C/G C C C C C C G C C C C C C C C
rs229955011
MGI SNP Detail
Alliance Variant		 Chr19:45889527 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253022232
MGI SNP Detail
Alliance Variant		 Chr19:45889543 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216051076
MGI SNP Detail
Alliance Variant		 Chr19:45889583 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
rs229195942
MGI SNP Detail
Alliance Variant		 Chr19:45889655 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548612 47 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 148
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory