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Mouse SNP Summary
Symbol
Name
ID
Rr548807
regulatory region 548807
MGI:8010939

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238057630
MGI SNP Detail
Alliance Variant
Chr19:46574482 Rr548807 1997 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs585310342
MGI SNP Detail
Alliance Variant
Chr19:46574483 Rr548807 1996 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50516281
MGI SNP Detail
Alliance Variant
Chr19:46574539 Rr548807 1940 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C C C
rs47711672
MGI SNP Detail
Alliance Variant
Chr19:46574547 Rr548807 1932 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G A
rs220645698
MGI SNP Detail
Alliance Variant
Chr19:46574553 Rr548807 1926 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241486421
MGI SNP Detail
Alliance Variant
Chr19:46574568 Rr548807 1911 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252740899
MGI SNP Detail
Alliance Variant
Chr19:46574594 Rr548807 1885 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221323164
MGI SNP Detail
Alliance Variant
Chr19:46574607 Rr548807 1872 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108618577
MGI SNP Detail
Alliance Variant
Chr19:46574621 Rr548807 1858 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C C C
rs265311857
MGI SNP Detail
Alliance Variant
Chr19:46574651 Rr548807 1828 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31281558
MGI SNP Detail
Alliance Variant
Chr19:46574687 Rr548807 1792 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C T C T T
rs241609667
MGI SNP Detail
Alliance Variant
Chr19:46574726 Rr548807 1753 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259540520
MGI SNP Detail
Alliance Variant
Chr19:46574774 Rr548807 1705 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs31209388
MGI SNP Detail
Alliance Variant
Chr19:46574797 Rr548807 1682 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/G C G C G G
rs248305780
MGI SNP Detail
Alliance Variant
Chr19:46574822 Rr548807 1657 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263896805
MGI SNP Detail
Alliance Variant
Chr19:46574865 Rr548807 1614 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228986789
MGI SNP Detail
Alliance Variant
Chr19:46574888 Rr548807 1591 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248823274
MGI SNP Detail
Alliance Variant
Chr19:46574905 Rr548807 1574 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579887501
MGI SNP Detail
Alliance Variant
Chr19:46574909 Rr548807 1570 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214766339
MGI SNP Detail
Alliance Variant
Chr19:46574922 Rr548807 1557 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231355755
MGI SNP Detail
Alliance Variant
Chr19:46574923 Rr548807 1556 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583148269
MGI SNP Detail
Alliance Variant
Chr19:46574927 Rr548807 1552 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245955681
MGI SNP Detail
Alliance Variant
Chr19:46574941 Rr548807 1538 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215195665
MGI SNP Detail
Alliance Variant
Chr19:46574948 Rr548807 1531 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263695774
MGI SNP Detail
Alliance Variant
Chr19:46574991 Rr548807 1488 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A C A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221757928
MGI SNP Detail
Alliance Variant
Chr19:46575057 Rr548807 1422 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs236490700
MGI SNP Detail
Alliance Variant
Chr19:46575094 Rr548807 1385 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257891483
MGI SNP Detail
Alliance Variant
Chr19:46575124 Rr548807 1355 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222205155
MGI SNP Detail
Alliance Variant
Chr19:46575125 Rr548807 1354 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241376288
MGI SNP Detail
Alliance Variant
Chr19:46575146 Rr548807 1333 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259478588
MGI SNP Detail
Alliance Variant
Chr19:46575148 Rr548807 1331 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223845733
MGI SNP Detail
Alliance Variant
Chr19:46575192 Rr548807 1287 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs242235905
MGI SNP Detail
Alliance Variant
Chr19:46575258 Rr548807 1221 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264936349
MGI SNP Detail
Alliance Variant
Chr19:46575263 Rr548807 1216 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30964873
MGI SNP Detail
Alliance Variant
Chr19:46575269 Rr548807 1210 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T T A T T T
rs252201295
MGI SNP Detail
Alliance Variant
Chr19:46575272 Rr548807 1207 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30995961
MGI SNP Detail
Alliance Variant
Chr19:46575364 Rr548807 1115 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T T A T A
rs262689550
MGI SNP Detail
Alliance Variant
Chr19:46575394 Rr548807 1085 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224918690
MGI SNP Detail
Alliance Variant
Chr19:46575399 Rr548807 1080 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245712652
MGI SNP Detail
Alliance Variant
Chr19:46575423 Rr548807 1056 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs31281550
MGI SNP Detail
Alliance Variant
Chr19:46575528 Rr548807 951 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T T G T G G G
rs31018047
MGI SNP Detail
Alliance Variant
Chr19:46575539 Rr548807 940 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T T G T G G G
rs253770374
MGI SNP Detail
Alliance Variant
Chr19:46575597 Rr548807 882 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30858431
MGI SNP Detail
Alliance Variant
Chr19:46575606 Rr548807 873 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A G G G G
rs234598613
MGI SNP Detail
Alliance Variant
Chr19:46575619 Rr548807 860 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs262543558
MGI SNP Detail
Alliance Variant
Chr19:46575694 Rr548807 785 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs219743256
MGI SNP Detail
Alliance Variant
Chr19:46575729 Rr548807 750 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234828761
MGI SNP Detail
Alliance Variant
Chr19:46575756 Rr548807 723 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C C C C C C
rs252935847
MGI SNP Detail
Alliance Variant
Chr19:46575787 Rr548807 692 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs223760574
MGI SNP Detail
Alliance Variant
Chr19:46575880 Rr548807 599 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580416209
MGI SNP Detail
Alliance Variant
Chr19:46575881 Rr548807 598 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs584131776
MGI SNP Detail
Alliance Variant
Chr19:46575886 Rr548807 593 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs242373073
MGI SNP Detail
Alliance Variant
Chr19:46575892 Rr548807 587 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs262061338
MGI SNP Detail
Alliance Variant
Chr19:46575911 Rr548807 568 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs220425294
MGI SNP Detail
Alliance Variant
Chr19:46575950 Rr548807 529 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs244510664
MGI SNP Detail
Alliance Variant
Chr19:46576058 Rr548807 421 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs31269082
MGI SNP Detail
Alliance Variant
Chr19:46576067 Rr548807 412 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A G G G G
rs225068085
MGI SNP Detail
Alliance Variant
Chr19:46576091 Rr548807 388 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239667289
MGI SNP Detail
Alliance Variant
Chr19:46576108 Rr548807 371 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256871087
MGI SNP Detail
Alliance Variant
Chr19:46576118 Rr548807 361 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229173037
MGI SNP Detail
Alliance Variant
Chr19:46576119 Rr548807 360 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30889154
MGI SNP Detail
Alliance Variant
Chr19:46576158 Rr548807 321 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C T T T T
rs212848228
MGI SNP Detail
Alliance Variant
Chr19:46576231 Rr548807 248 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs227971386
MGI SNP Detail
Alliance Variant
Chr19:46576254 Rr548807 225 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs47931065
MGI SNP Detail
Alliance Variant
Chr19:46576258 Rr548807 221 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C C C C
rs49758612
MGI SNP Detail
Alliance Variant
Chr19:46576276 Rr548807 203 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C T T T T C T T T C T C T
rs234972328
MGI SNP Detail
Alliance Variant
Chr19:46576286 Rr548807 193 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252871307
MGI SNP Detail
Alliance Variant
Chr19:46576457 Rr548807 22 bp proximal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
Sfxn2 Splice-Site
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46476497
MGI SNP Detail
Alliance Variant
Chr19:46576482 Rr548807 within coordinates of
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A G G G G
rs49519999
MGI SNP Detail
Alliance Variant
Chr19:46576487 Rr548807 within coordinates of
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C T T T T
rs261762609
MGI SNP Detail
Alliance Variant
Chr19:46576520 Rr548807 20 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220965512
MGI SNP Detail
Alliance Variant
Chr19:46576817 Rr548807 317 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46178939
MGI SNP Detail
Alliance Variant
Chr19:46576839 Rr548807 339 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G A A A A
rs46329870
MGI SNP Detail
Alliance Variant
Chr19:46576865 Rr548807 365 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A G A A G A A
rs47072096
MGI SNP Detail
Alliance Variant
Chr19:46576899 Rr548807 399 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239802151
MGI SNP Detail
Alliance Variant
Chr19:46576900 Rr548807 400 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs46592971
MGI SNP Detail
Alliance Variant
Chr19:46576910 Rr548807 410 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C C C C
rs46601689
MGI SNP Detail
Alliance Variant
Chr19:46576913 Rr548807 413 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/G G C C G C
rs46473758
MGI SNP Detail
Alliance Variant
Chr19:46576932 Rr548807 432 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T C C T C C C
rs247026058
MGI SNP Detail
Alliance Variant
Chr19:46576993 Rr548807 493 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs264848805
MGI SNP Detail
Alliance Variant
Chr19:46576994 Rr548807 494 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227625043
MGI SNP Detail
Alliance Variant
Chr19:46577022 Rr548807 522 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256086120
MGI SNP Detail
Alliance Variant
Chr19:46577054 Rr548807 554 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213539125
MGI SNP Detail
Alliance Variant
Chr19:46577196 Rr548807 696 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228164625
MGI SNP Detail
Alliance Variant
Chr19:46577204 Rr548807 704 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50077349
MGI SNP Detail
Alliance Variant
Chr19:46577217 Rr548807 717 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C C A A A A
rs242157646
MGI SNP Detail
Alliance Variant
Chr19:46577284 Rr548807 784 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C
rs237426547
MGI SNP Detail
Alliance Variant
Chr19:46577350 Rr548807 850 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249926454
MGI SNP Detail
Alliance Variant
Chr19:46577379 Rr548807 879 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108237773
MGI SNP Detail
Alliance Variant
Chr19:46577386 Rr548807 886 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G A A
rs239541607
MGI SNP Detail
Alliance Variant
Chr19:46577408 Rr548807 908 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C C C C C C C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T C
rs261785485
MGI SNP Detail
Alliance Variant
Chr19:46577474 Rr548807 974 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A C C C C C C A
rs257561555
MGI SNP Detail
Alliance Variant
Chr19:46577484 Rr548807 984 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T
rs261387881
MGI SNP Detail
Alliance Variant
Chr19:46577520 Rr548807 1020 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233292675
MGI SNP Detail
Alliance Variant
Chr19:46577600 Rr548807 1100 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G/T A A A A A A A A A A A A A A A A A A A T A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs45758876
MGI SNP Detail
Alliance Variant
Chr19:46577622 Rr548807 1122 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G G A A A
rs212107736
MGI SNP Detail
Alliance Variant
Chr19:46577640 Rr548807 1140 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46131721
MGI SNP Detail
Alliance Variant
Chr19:46577646 Rr548807 1146 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP A/G A G G G
rs583683622
MGI SNP Detail
Alliance Variant
Chr19:46577666 Rr548807 1166 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs586547224
MGI SNP Detail
Alliance Variant
Chr19:46577667 Rr548807 1167 bp distal
Sfxn2 Intron
Sfxn2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T
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Showing SNP(s) 1 - 100 of 120

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory

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