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Mouse SNP Summary
Symbol
Name
ID
Rr548843
regulatory region 548843
MGI:8010975

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265876384
MGI SNP Detail
Chr19:46692266 Rr548843 1951 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs228290691
MGI SNP Detail
Chr19:46692276 Rr548843 1941 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243624719
MGI SNP Detail
Chr19:46692361 Rr548843 1856 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C T C C C C
rs248514828
MGI SNP Detail
Chr19:46692362 Rr548843 1855 bp proximal
SNP A/C A C
rs216383184
MGI SNP Detail
Chr19:46692363 Rr548843 1854 bp proximal
SNP A/C A C
rs245989852
MGI SNP Detail
Chr19:46692503 Rr548843 1714 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580705781
MGI SNP Detail
Chr19:46692574 Rr548843 1643 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215048835
MGI SNP Detail
Chr19:46692664 Rr548843 1553 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229164130
MGI SNP Detail
Chr19:46692714 Rr548843 1503 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583842962
MGI SNP Detail
Chr19:46692875 Rr548843 1342 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs587125461
MGI SNP Detail
Chr19:46692885 Rr548843 1332 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234582482
MGI SNP Detail
Chr19:46692921 Rr548843 1296 bp proximal
SNP A/G A G
rs246260659
MGI SNP Detail
Chr19:46693229 Rr548843 988 bp proximal
SNP A/G G A
rs585085039
MGI SNP Detail
Chr19:46693235 Rr548843 982 bp proximal
SNP A/G A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A
rs578638333
MGI SNP Detail
Chr19:46693384 Rr548843 833 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581140860
MGI SNP Detail
Chr19:46693432 Rr548843 785 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254082374
MGI SNP Detail
Chr19:46693524 Rr548843 693 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213480106
MGI SNP Detail
Chr19:46693549 Rr548843 668 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234706677
MGI SNP Detail
Chr19:46693667 Rr548843 550 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30419923
MGI SNP Detail
Chr19:46693749 Rr548843 468 bp proximal
SNP C/T T C C C
rs213972748
MGI SNP Detail
Chr19:46693755 Rr548843 462 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235156566
MGI SNP Detail
Chr19:46693875 Rr548843 342 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253247970
MGI SNP Detail
Chr19:46693885 Rr548843 332 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48790970
MGI SNP Detail
Chr19:46693919 Rr548843 298 bp proximal
SNP A/G A A A A G A G G G A G G A G A
rs250553455
MGI SNP Detail
Chr19:46693931 Rr548843 286 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46547243
MGI SNP Detail
Chr19:46693932 Rr548843 285 bp proximal
SNP C/T T T T T C T C C C T C C T C T
rs220801574
MGI SNP Detail
Chr19:46694012 Rr548843 205 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222175082
MGI SNP Detail
Chr19:46694161 Rr548843 56 bp proximal
SNP G G G
rs584703023
MGI SNP Detail
Chr19:46694205 Rr548843 12 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52534116
MGI SNP Detail
Chr19:46694218 Rr548843 within coordinates of
SNP A/T T T A T T A A T A A A A A A A A T
rs30987484
MGI SNP Detail
Chr19:46694265 Rr548843 within coordinates of
SNP C/T T T C T T C C C C C C
rs50768363
MGI SNP Detail
Chr19:46694297 Rr548843 within coordinates of
SNP G/T G G G G G G G G G G T G G T G
rs49384997
MGI SNP Detail
Chr19:46694360 Rr548843 within coordinates of
SNP A/G A A A A A A A A A A A A A G A
rs229086119
MGI SNP Detail
Chr19:46694370 Rr548843 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48014275
MGI SNP Detail
Chr19:46694374 Rr548843 within coordinates of
SNP A/G A A A A A A G A A A A A A A A
rs45868529
MGI SNP Detail
Chr19:46694399 Rr548843 within coordinates of
SNP C/T C C C C C C C C C C C C C T C
rs578307368
MGI SNP Detail
Chr19:46694421 Rr548843 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228489595
MGI SNP Detail
Chr19:46694540 Rr548843 33 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251711175
MGI SNP Detail
Chr19:46694705 Rr548843 198 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213700389
MGI SNP Detail
Chr19:46694793 Rr548843 286 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs30660844
MGI SNP Detail
Chr19:46694798 Rr548843 291 bp distal
SNP A/G A G A G G
rs246848881
MGI SNP Detail
Chr19:46694868 Rr548843 361 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217787656
MGI SNP Detail
Chr19:46694966 Rr548843 459 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239725929
MGI SNP Detail
Chr19:46695056 Rr548843 549 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30849140
MGI SNP Detail
Alliance Variant
Chr19:46695130 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 623 bp distal
SNP C/T C T T C C C T C C C C C C C
rs47569446
MGI SNP Detail
Alliance Variant
Chr19:46695131 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 624 bp distal
SNP A/G G G A G G G A A A G A A G A G
rs235960577
MGI SNP Detail
Alliance Variant
Chr19:46695172 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 665 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48223362
MGI SNP Detail
Alliance Variant
Chr19:46695194 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 687 bp distal
SNP A/G G A G A A A A A A
rs219089670
MGI SNP Detail
Alliance Variant
Chr19:46695234 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 727 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239710250
MGI SNP Detail
Alliance Variant
Chr19:46695327 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 820 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257147967
MGI SNP Detail
Alliance Variant
Chr19:46695454 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 947 bp distal
Rr548844 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227161917
MGI SNP Detail
Alliance Variant
Chr19:46695462 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 955 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247249435
MGI SNP Detail
Alliance Variant
Chr19:46695476 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 969 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264825388
MGI SNP Detail
Alliance Variant
Chr19:46695506 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 999 bp distal
Rr548844 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227534468
MGI SNP Detail
Alliance Variant
Chr19:46695542 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 1035 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245879996
MGI SNP Detail
Alliance Variant
Chr19:46695594 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 1087 bp distal
Rr548844 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257750423
MGI SNP Detail
Alliance Variant
Chr19:46695682 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 1175 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228112201
MGI SNP Detail
Alliance Variant
Chr19:46695760 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Gm59338 within coordinates of
Rr548843 1253 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30500261
MGI SNP Detail
Alliance Variant
Chr19:46695796 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1289 bp distal
Rr548844 within coordinates of
SNP A/G G A G A G G G A G G G G G G G
rs246565026
MGI SNP Detail
Alliance Variant
Chr19:46695820 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1313 bp distal
Rr548844 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217750317
MGI SNP Detail
Alliance Variant
Chr19:46695843 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1336 bp distal
Rr548844 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242562230
MGI SNP Detail
Alliance Variant
Chr19:46695857 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1350 bp distal
Rr548844 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250297134
MGI SNP Detail
Alliance Variant
Chr19:46695911 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1404 bp distal
Tssr156803 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs581802989
MGI SNP Detail
Alliance Variant
Chr19:46695918 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1411 bp distal
Tssr156803 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586188331
MGI SNP Detail
Alliance Variant
Chr19:46695926 As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1419 bp distal
Tssr156803 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31149127
MGI SNP Detail
Alliance Variant
Chr19:46696003 As3mt Intron
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1496 bp distal
SNP G/T G T T T G T G T G G G G G T G
rs237326850
MGI SNP Detail
Alliance Variant
Chr19:46696028 As3mt Intron
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1521 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250228979
MGI SNP Detail
Alliance Variant
Chr19:46696044 As3mt Intron
As3mt Noncoding-Transcript-Variant
Cpgi11011 within coordinates of
Gm59338 within coordinates of
Rr548843 1537 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47475526
MGI SNP Detail
Alliance Variant
Chr19:46696098 As3mt Intron
As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Gm59338 within coordinates of
Rr548843 1591 bp distal
Tssr156804 within coordinates of
SNP A/C C A C
rs233260565
MGI SNP Detail
Alliance Variant
Chr19:46696167 As3mt Intron
As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Gm59338 within coordinates of
Rr548843 1660 bp distal
Tssr156805 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs47497772
MGI SNP Detail
Alliance Variant
Chr19:46696279 As3mt Intron
As3mt Noncoding-Transcript-Variant
Gm59338 within coordinates of
Rr548843 1772 bp distal
SNP C/T T T T T T T T T T T C T T T T
rs250948601
MGI SNP Detail
Alliance Variant
Chr19:46696413 As3mt Intron
As3mt mRNA-UTR
As3mt Noncoding-Transcript-Variant
Rr548843 1906 bp distal
Rr548845 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 72 of 72

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory