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Mouse SNP Summary
Symbol
Name
ID
Rr548881
regulatory region 548881
MGI:8011013

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225903711
MGI SNP Detail
Alliance Variant
Chr19:46873362 Nt5c2 mRNA-UTR
Rr548881 1994 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30408407
MGI SNP Detail
Alliance Variant
Chr19:46873363 Nt5c2 mRNA-UTR
Rr548881 1993 bp proximal
SNP A/G G G G G G G A G G G G G A G G A G G
rs247977740
MGI SNP Detail
Alliance Variant
Chr19:46873536 Nt5c2 mRNA-UTR
Rr548881 1820 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C G C C C G C C C C C C G C C C C C C C C C G C
rs219756213
MGI SNP Detail
Alliance Variant
Chr19:46873547 Nt5c2 mRNA-UTR
Rr548881 1809 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237180960
MGI SNP Detail
Alliance Variant
Chr19:46873565 Nt5c2 mRNA-UTR
Rr548881 1791 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258024399
MGI SNP Detail
Alliance Variant
Chr19:46873584 Nt5c2 mRNA-UTR
Rr548881 1772 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224221461
MGI SNP Detail
Alliance Variant
Chr19:46873730 Nt5c2 mRNA-UTR
Rr548881 1626 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251069206
MGI SNP Detail
Alliance Variant
Chr19:46873796 Nt5c2 mRNA-UTR
Rr548881 1560 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263975562
MGI SNP Detail
Alliance Variant
Chr19:46873805 Nt5c2 mRNA-UTR
Rr548881 1551 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229103603
MGI SNP Detail
Alliance Variant
Chr19:46873874 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1482 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258508211
MGI SNP Detail
Alliance Variant
Chr19:46873898 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1458 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225803331
MGI SNP Detail
Alliance Variant
Chr19:46873937 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1419 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51269497
MGI SNP Detail
Alliance Variant
Chr19:46873987 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1369 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs215534452
MGI SNP Detail
Alliance Variant
Chr19:46874069 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1287 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240733476
MGI SNP Detail
Alliance Variant
Chr19:46874131 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1225 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45769880
MGI SNP Detail
Alliance Variant
Chr19:46874300 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1056 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs50207203
MGI SNP Detail
Alliance Variant
Chr19:46874308 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1048 bp proximal
SNP A/G A A A A A A A A A A A A A A G
rs48372803
MGI SNP Detail
Alliance Variant
Chr19:46874400 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 956 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs236614678
MGI SNP Detail
Alliance Variant
Chr19:46874457 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 899 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30845016
MGI SNP Detail
Alliance Variant
Chr19:46874546 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 810 bp proximal
SNP A/G G G A A A G A G G A A A A G A A G A G
rs214187396
MGI SNP Detail
Alliance Variant
Chr19:46874551 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 805 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231121236
MGI SNP Detail
Alliance Variant
Chr19:46874578 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 778 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251700055
MGI SNP Detail
Alliance Variant
Chr19:46874604 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 752 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224151299
MGI SNP Detail
Alliance Variant
Chr19:46874698 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 658 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248275510
MGI SNP Detail
Alliance Variant
Chr19:46874705 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 651 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263747188
MGI SNP Detail
Alliance Variant
Chr19:46874780 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 576 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A
rs221266176
MGI SNP Detail
Alliance Variant
Chr19:46874838 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 518 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46672182
MGI SNP Detail
Alliance Variant
Chr19:46874915 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 441 bp proximal
SNP A/G A G G G A G G G G G G G G G G
rs48049209
MGI SNP Detail
Alliance Variant
Chr19:46875019 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 337 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs51140049
MGI SNP Detail
Alliance Variant
Chr19:46875036 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 320 bp proximal
SNP A/T T T T T T T T T T T A T T A T
rs46891746
MGI SNP Detail
Alliance Variant
Chr19:46875043 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 313 bp proximal
SNP A/G A G G G A G G G G G G G G G G
rs47404940
MGI SNP Detail
Alliance Variant
Chr19:46875051 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 305 bp proximal
SNP A/G A A A G A G A A A A G A A G A G
rs235064108
MGI SNP Detail
Alliance Variant
Chr19:46875090 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 266 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45667594
MGI SNP Detail
Alliance Variant
Chr19:46875128 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 228 bp proximal
SNP C/G G G G G G G C G G G G G G G G
rs48374989
MGI SNP Detail
Alliance Variant
Chr19:46875188 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 168 bp proximal
SNP A/G A A A A A G A A A G A A G A
rs223682962
MGI SNP Detail
Alliance Variant
Chr19:46875220 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 136 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47295002
MGI SNP Detail
Alliance Variant
Chr19:46875226 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 130 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs214176674
MGI SNP Detail
Alliance Variant
Chr19:46875296 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 60 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231251280
MGI SNP Detail
Alliance Variant
Chr19:46875359 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49466337
MGI SNP Detail
Alliance Variant
Chr19:46875405 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP A/G A A A A A A A A A A A A A A G
rs215267795
MGI SNP Detail
Alliance Variant
Chr19:46875479 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242673664
MGI SNP Detail
Alliance Variant
Chr19:46875481 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260199388
MGI SNP Detail
Alliance Variant
Chr19:46875483 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221104458
MGI SNP Detail
Alliance Variant
Chr19:46875519 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs13483648
MGI SNP Detail
Alliance Variant
Chr19:46875521 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 within coordinates of
SNP A/G G A G G G G G G A A A A A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs251963412
MGI SNP Detail
Alliance Variant
Chr19:46875648 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 63 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219701731
MGI SNP Detail
Alliance Variant
Chr19:46875709 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 124 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51098203
MGI SNP Detail
Alliance Variant
Chr19:46875846 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 261 bp distal
SNP A/G A A A A A A A A A A A A A A G
rs265555884
MGI SNP Detail
Alliance Variant
Chr19:46875890 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 305 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs233896186
MGI SNP Detail
Alliance Variant
Chr19:46875940 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 355 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250271786
MGI SNP Detail
Alliance Variant
Chr19:46876030 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 445 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs47426944
MGI SNP Detail
Alliance Variant
Chr19:46876152 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 567 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs50389901
MGI SNP Detail
Alliance Variant
Chr19:46876233 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 648 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs223918836
MGI SNP Detail
Alliance Variant
Chr19:46876334 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 749 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244781539
MGI SNP Detail
Alliance Variant
Chr19:46876350 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 765 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49327057
MGI SNP Detail
Alliance Variant
Chr19:46876363 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 778 bp distal
Rr548882 within coordinates of
SNP C/T C T T T C T T T T T T T T T T
rs49737511
MGI SNP Detail
Alliance Variant
Chr19:46876368 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 783 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs252866819
MGI SNP Detail
Alliance Variant
Chr19:46876374 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 789 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215909864
MGI SNP Detail
Alliance Variant
Chr19:46876384 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 799 bp distal
Rr548882 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239973271
MGI SNP Detail
Alliance Variant
Chr19:46876390 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 805 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258895589
MGI SNP Detail
Alliance Variant
Chr19:46876407 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 822 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212782314
MGI SNP Detail
Alliance Variant
Chr19:46876426 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 841 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229890583
MGI SNP Detail
Alliance Variant
Chr19:46876446 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 861 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252045618
MGI SNP Detail
Alliance Variant
Chr19:46876505 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 920 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48198809
MGI SNP Detail
Alliance Variant
Chr19:46876512 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr370522 within coordinates of
Rr548881 927 bp distal
Rr548882 within coordinates of
SNP G/T G G G G G G G G G G T G G G G
rs3670555
MGI SNP Detail
Alliance Variant
Chr19:46876620 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1035 bp distal
Rr548882 within coordinates of
SNP A/G G A A A G A A A A A A A A A
rs49669961
MGI SNP Detail
Alliance Variant
Chr19:46876624 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1039 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs258772401
MGI SNP Detail
Alliance Variant
Chr19:46876625 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1040 bp distal
Rr548882 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227418514
MGI SNP Detail
Alliance Variant
Chr19:46876640 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1055 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247519550
MGI SNP Detail
Alliance Variant
Chr19:46876642 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1057 bp distal
Rr548882 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs264887932
MGI SNP Detail
Alliance Variant
Chr19:46876664 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1079 bp distal
Rr548882 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs218043518
MGI SNP Detail
Alliance Variant
Chr19:46876683 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1098 bp distal
Rr548882 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs238736815
MGI SNP Detail
Alliance Variant
Chr19:46876788 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1203 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30897635
MGI SNP Detail
Alliance Variant
Chr19:46876817 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1232 bp distal
Rr548882 within coordinates of
SNP A/G A A G G G A G A G G G G A G G A G A
rs50756919
MGI SNP Detail
Alliance Variant
Chr19:46876865 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1280 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C T C C C T C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257652516
MGI SNP Detail
Alliance Variant
Chr19:46876914 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1329 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263064276
MGI SNP Detail
Alliance Variant
Chr19:46876934 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1349 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234757047
MGI SNP Detail
Alliance Variant
Chr19:46876945 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1360 bp distal
Rr548882 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253611043
MGI SNP Detail
Alliance Variant
Chr19:46876953 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1368 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212508409
MGI SNP Detail
Alliance Variant
Chr19:46876965 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1380 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51549875
MGI SNP Detail
Alliance Variant
Chr19:46877004 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1419 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs245668647
MGI SNP Detail
Alliance Variant
Chr19:46877011 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1426 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45884519
MGI SNP Detail
Alliance Variant
Chr19:46877038 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1453 bp distal
SNP A/G A A A A A A A A A A A A A G A
rs213634660
MGI SNP Detail
Alliance Variant
Chr19:46877205 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1620 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs48340839
MGI SNP Detail
Alliance Variant
Chr19:46877238 Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1653 bp distal
SNP C/G C C C C C C G C C C G C C G C
rs262857253
MGI SNP Detail
Alliance Variant
Chr19:46877272 Nt5c2 Coding-Synonymous
Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1687 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30448820
MGI SNP Detail
Alliance Variant
Chr19:46877428 Nt5c2 Coding-Synonymous
Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1843 bp distal
SNP G/T T G G G G
rs242344135
MGI SNP Detail
Alliance Variant
Chr19:46877458 Nt5c2 Coding-Synonymous
Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1873 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs47538294
MGI SNP Detail
Alliance Variant
Chr19:46877467 Nt5c2 Coding-Synonymous
Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1882 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs30993503
MGI SNP Detail
Alliance Variant
Chr19:46877512 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1927 bp distal
SNP A/G A G G G G A G G G G G G G G G G G
rs238452391
MGI SNP Detail
Alliance Variant
Chr19:46877528 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1943 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs45860497
MGI SNP Detail
Alliance Variant
Chr19:46877530 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1945 bp distal
SNP A/G A A A A A A A A A A G A A A A
rs221720218
MGI SNP Detail
Alliance Variant
Chr19:46877537 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1952 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46396653
MGI SNP Detail
Alliance Variant
Chr19:46877572 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1987 bp distal
SNP A/C C C C C C C C C C C A C C A C
rs266225499
MGI SNP Detail
Alliance Variant
Chr19:46877581 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548881 1996 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 95 of 95

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory