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Mouse SNP Summary
Symbol
Name
ID
Rr548886
regulatory region 548886
MGI:8011018

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47919598
MGI SNP Detail
Alliance Variant
Chr19:46891487 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1968 bp proximal
SNP C/T T T T T T T T T T T T T T C T
rs30886715
MGI SNP Detail
Alliance Variant
Chr19:46891604 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1851 bp proximal
SNP A/G G A G A A A
rs230334854
MGI SNP Detail
Alliance Variant
Chr19:46891677 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1778 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs46658955
MGI SNP Detail
Alliance Variant
Chr19:46891781 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1674 bp proximal
SNP C/T C C C C C C T C C C C C C T C
rs216395070
MGI SNP Detail
Alliance Variant
Chr19:46891786 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1669 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31281561
MGI SNP Detail
Alliance Variant
Chr19:46891838 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1617 bp proximal
SNP A/G G A G A G G G
rs247246715
MGI SNP Detail
Alliance Variant
Chr19:46891932 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1523 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216318775
MGI SNP Detail
Alliance Variant
Chr19:46891933 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1522 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31090242
MGI SNP Detail
Alliance Variant
Chr19:46891950 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1505 bp proximal
SNP A/C A C A C A A A
rs255459338
MGI SNP Detail
Alliance Variant
Chr19:46891999 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1456 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586483204
MGI SNP Detail
Alliance Variant
Chr19:46892043 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1412 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223169276
MGI SNP Detail
Alliance Variant
Chr19:46892059 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1396 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236064674
MGI SNP Detail
Alliance Variant
Chr19:46892070 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1385 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A A A A A A A A A A A A
rs263302056
MGI SNP Detail
Alliance Variant
Chr19:46892137 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1318 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580073290
MGI SNP Detail
Alliance Variant
Chr19:46892146 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1309 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs30378137
MGI SNP Detail
Alliance Variant
Chr19:46892189 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1266 bp proximal
SNP C/T C T C C C
rs242890359
MGI SNP Detail
Alliance Variant
Chr19:46892196 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1259 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs260783239
MGI SNP Detail
Alliance Variant
Chr19:46892227 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1228 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218925584
MGI SNP Detail
Alliance Variant
Chr19:46892252 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1203 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T T T T T T T C T T T T
rs244172836
MGI SNP Detail
Alliance Variant
Chr19:46892289 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1166 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262953099
MGI SNP Detail
Alliance Variant
Chr19:46892424 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1031 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs45706446
MGI SNP Detail
Alliance Variant
Chr19:46892475 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 980 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs253536473
MGI SNP Detail
Alliance Variant
Chr19:46892539 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 916 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50701572
MGI SNP Detail
Alliance Variant
Chr19:46892558 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 897 bp proximal
SNP C/T T T T T T T T T T T T T C T
rs229476396
MGI SNP Detail
Alliance Variant
Chr19:46892580 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 875 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247181111
MGI SNP Detail
Alliance Variant
Chr19:46892592 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 863 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs216498903
MGI SNP Detail
Alliance Variant
Chr19:46892675 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 780 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230419612
MGI SNP Detail
Alliance Variant
Chr19:46892676 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 779 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252059316
MGI SNP Detail
Alliance Variant
Chr19:46892723 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 732 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs214716298
MGI SNP Detail
Alliance Variant
Chr19:46892732 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 723 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs237986583
MGI SNP Detail
Alliance Variant
Chr19:46892736 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 719 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs52031848
MGI SNP Detail
Alliance Variant
Chr19:46892744 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 711 bp proximal
SNP C/T C C C C C C T C C C C C C
rs220870221
MGI SNP Detail
Alliance Variant
Chr19:46892760 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 695 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236300546
MGI SNP Detail
Alliance Variant
Chr19:46892763 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 692 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254598827
MGI SNP Detail
Alliance Variant
Chr19:46892765 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 690 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219047489
MGI SNP Detail
Alliance Variant
Chr19:46892798 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 657 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs50265162
MGI SNP Detail
Alliance Variant
Chr19:46892902 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 553 bp proximal
SNP A/G A A A A A A A G G A A G A A
rs265297873
MGI SNP Detail
Alliance Variant
Chr19:46892949 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 506 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222670714
MGI SNP Detail
Alliance Variant
Chr19:46892974 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 481 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47148994
MGI SNP Detail
Alliance Variant
Chr19:46892978 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 477 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs257653100
MGI SNP Detail
Alliance Variant
Chr19:46892984 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 471 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229464986
MGI SNP Detail
Alliance Variant
Chr19:46893119 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 336 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31143506
MGI SNP Detail
Alliance Variant
Chr19:46893202 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 253 bp proximal
SNP A/G A A G A G G G
rs258693276
MGI SNP Detail
Alliance Variant
Chr19:46893319 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 136 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31219811
MGI SNP Detail
Alliance Variant
Chr19:46893401 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 54 bp proximal
SNP A/C C C A A A C A C A A A A A A A C
rs47890969
MGI SNP Detail
Alliance Variant
Chr19:46893409 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Nt5c2 Splice-Site
Rr548886 46 bp proximal
SNP G/T G G G G G G G G T T G
rs6361228
MGI SNP Detail
Alliance Variant
Chr19:46893518 Nt5c2 Coding-Synonymous
Nt5c2 mRNA-UTR
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T T T T T T T T T C T T T C T T C T
rs6361379
MGI SNP Detail
Alliance Variant
Chr19:46893596 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/G A A A A A A A A G A A A G A A G A
rs258207115
MGI SNP Detail
Alliance Variant
Chr19:46893601 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30648952
MGI SNP Detail
Alliance Variant
Chr19:46893648 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/G C G C C C C C G G C C C C G C C G C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236238051
MGI SNP Detail
Alliance Variant
Chr19:46893668 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48384102
MGI SNP Detail
Alliance Variant
Chr19:46893669 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs212762558
MGI SNP Detail
Alliance Variant
Chr19:46893704 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236447409
MGI SNP Detail
Alliance Variant
Chr19:46893737 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258040934
MGI SNP Detail
Alliance Variant
Chr19:46893776 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587386725
MGI SNP Detail
Alliance Variant
Chr19:46893793 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6362473
MGI SNP Detail
Alliance Variant
Chr19:46893810 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T T C T C C C C
rs31035287
MGI SNP Detail
Alliance Variant
Chr19:46893853 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP G/T T G T T T T T G G T T T T G T T G T T
rs6376540
MGI SNP Detail
Alliance Variant
Chr19:46894077 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T C T C C C C
rs6376552
MGI SNP Detail
Alliance Variant
Chr19:46894087 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP C/T T C
rs46666650
MGI SNP Detail
Alliance Variant
Chr19:46894154 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/C C C C C C C C C C C A C C A C
rs50234250
MGI SNP Detail
Alliance Variant
Chr19:46894221 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/G A G G G A G G G G G G G G G A
rs30905299
MGI SNP Detail
Alliance Variant
Chr19:46894339 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 within coordinates of
SNP A/G G G G G G G A A G G G G A G G A G G
rs48972227
MGI SNP Detail
Alliance Variant
Chr19:46894345 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 2 bp distal
SNP C/T T T T T T C T C T
rs262687360
MGI SNP Detail
Alliance Variant
Chr19:46894419 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 76 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs50797138
MGI SNP Detail
Alliance Variant
Chr19:46894420 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 77 bp distal
SNP A/G G A A A G A A A A A A A A
rs47887403
MGI SNP Detail
Alliance Variant
Chr19:46894443 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 100 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs215142250
MGI SNP Detail
Alliance Variant
Chr19:46894523 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 180 bp distal
Rr548887 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs30316015
MGI SNP Detail
Alliance Variant
Chr19:46894527 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 184 bp distal
Rr548887 within coordinates of
SNP C/G G C G G G
rs248007415
MGI SNP Detail
Alliance Variant
Chr19:46894528 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 185 bp distal
Rr548887 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213041835
MGI SNP Detail
Alliance Variant
Chr19:46894598 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 255 bp distal
Rr548887 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234562962
MGI SNP Detail
Alliance Variant
Chr19:46894697 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 354 bp distal
Rr548887 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262540731
MGI SNP Detail
Alliance Variant
Chr19:46894765 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 422 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs214078132
MGI SNP Detail
Alliance Variant
Chr19:46894770 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 427 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46622838
MGI SNP Detail
Alliance Variant
Chr19:46894794 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 451 bp distal
SNP C/T C C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241134584
MGI SNP Detail
Alliance Variant
Chr19:46894836 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 493 bp distal
SNP A/T A A A T T T T T A T T T T T T T T T T T T A T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T
rs251332608
MGI SNP Detail
Alliance Variant
Chr19:46894846 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 503 bp distal
SNP G/T T T T G G G G G T G G G G G G G G G G G G T G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G
rs49476376
MGI SNP Detail
Alliance Variant
Chr19:46894852 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 509 bp distal
SNP C/T C C T
rs241141943
MGI SNP Detail
Alliance Variant
Chr19:46894895 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 552 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31303059
MGI SNP Detail
Chr19:46895023 Nt5c2 within coordinates of
Rr548886 680 bp distal
SNP C/T T C T
rs46776024
MGI SNP Detail
Alliance Variant
Chr19:46895061 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 718 bp distal
SNP C/T T T T T T T T T T T C C T T C T
rs244521469
MGI SNP Detail
Alliance Variant
Chr19:46895162 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 819 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs50317712
MGI SNP Detail
Alliance Variant
Chr19:46895170 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 827 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs222379835
MGI SNP Detail
Alliance Variant
Chr19:46895171 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 828 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241090661
MGI SNP Detail
Alliance Variant
Chr19:46895177 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 834 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs258760698
MGI SNP Detail
Alliance Variant
Chr19:46895240 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 897 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228943978
MGI SNP Detail
Alliance Variant
Chr19:46895271 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 928 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48774891
MGI SNP Detail
Alliance Variant
Chr19:46895285 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 942 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs46738522
MGI SNP Detail
Alliance Variant
Chr19:46895444 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1101 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs227988594
MGI SNP Detail
Alliance Variant
Chr19:46895452 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1109 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51463132
MGI SNP Detail
Alliance Variant
Chr19:46895489 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1146 bp distal
SNP C/T C C C C C C C C C C T C C C C
rs251424682
MGI SNP Detail
Alliance Variant
Chr19:46895516 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1173 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214388946
MGI SNP Detail
Alliance Variant
Chr19:46895632 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1289 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs583483037
MGI SNP Detail
Alliance Variant
Chr19:46895793 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1450 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233699722
MGI SNP Detail
Alliance Variant
Chr19:46895860 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1517 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245446226
MGI SNP Detail
Alliance Variant
Chr19:46895861 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1518 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217338513
MGI SNP Detail
Alliance Variant
Chr19:46895890 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1547 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs234435876
MGI SNP Detail
Alliance Variant
Chr19:46895925 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1582 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261765741
MGI SNP Detail
Alliance Variant
Chr19:46895978 Nt5c2 Intron
Nt5c2 Noncoding-Transcript-Variant
Rr548886 1635 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
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Showing SNP(s) 1 - 100 of 103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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