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Mouse SNP Summary
Symbol
Name
ID
Rr548960
regulatory region 548960
MGI:8011092

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Showing SNP(s) 1 - 100 of 140

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46789795
MGI SNP Detail
Chr19:47153347 Rr548960 1941 bp proximal
SNP C C C C C
rs47601228
MGI SNP Detail
Chr19:47153371 Rr548960 1917 bp proximal
SNP G G G G G
rs48539559
MGI SNP Detail
Chr19:47153395 Rr548960 1893 bp proximal
SNP G/T G G G T
rs50984776
MGI SNP Detail
Chr19:47153428 Rr548960 1860 bp proximal
SNP T T T
rs46854866
MGI SNP Detail
Chr19:47153442 Rr548960 1846 bp proximal
SNP A A
rs245123585
MGI SNP Detail
Chr19:47153449 Rr548960 1839 bp proximal
SNP A/G G G G G A G G G G A A A G G G G G G G A A G G G G A A A A G A G A A A A A A A A G A A A A A A A G A A A A
rs49213985
MGI SNP Detail
Chr19:47153455 Rr548960 1833 bp proximal
SNP G G G
rs47891377
MGI SNP Detail
Chr19:47153477 Rr548960 1811 bp proximal
SNP A A A A
rs46608420
MGI SNP Detail
Chr19:47153501 Rr548960 1787 bp proximal
SNP A A A A A
rs254631477
MGI SNP Detail
Chr19:47153537 Rr548960 1751 bp proximal
SNP C C C
rs46624351
MGI SNP Detail
Chr19:47153540 Rr548960 1748 bp proximal
SNP G G G G
rs243123782
MGI SNP Detail
Chr19:47153550 Rr548960 1738 bp proximal
SNP C/G G C
rs49402232
MGI SNP Detail
Chr19:47153569 Rr548960 1719 bp proximal
SNP T T
rs48079546
MGI SNP Detail
Chr19:47153600 Rr548960 1688 bp proximal
SNP A A
rs51293302
MGI SNP Detail
Chr19:47153610 Rr548960 1678 bp proximal
SNP C C
rs260429187
MGI SNP Detail
Chr19:47153622 Rr548960 1666 bp proximal
SNP G G G
rs231822991
MGI SNP Detail
Chr19:47153625 Rr548960 1663 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs249700734
MGI SNP Detail
Chr19:47153779 Rr548960 1509 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221397018
MGI SNP Detail
Chr19:47153801 Rr548960 1487 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239125584
MGI SNP Detail
Chr19:47153882 Rr548960 1406 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260755327
MGI SNP Detail
Chr19:47153909 Rr548960 1379 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C G C C C C C C C C C C C C C C G C C C C
rs47171103
MGI SNP Detail
Chr19:47153915 Rr548960 1373 bp proximal
SNP G G G
rs242439324
MGI SNP Detail
Chr19:47153950 Rr548960 1338 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs232976330
MGI SNP Detail
Chr19:47153989 Rr548960 1299 bp proximal
SNP T T T
rs226660163
MGI SNP Detail
Chr19:47154002 Rr548960 1286 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238907145
MGI SNP Detail
Chr19:47154014 Rr548960 1274 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250372675
MGI SNP Detail
Chr19:47154029 Rr548960 1259 bp proximal
SNP T T T
rs227687753
MGI SNP Detail
Chr19:47154033 Rr548960 1255 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219250851
MGI SNP Detail
Chr19:47154038 Rr548960 1250 bp proximal
SNP T T T
rs582356182
MGI SNP Detail
Chr19:47154060 Rr548960 1228 bp proximal
SNP A/G G G G G G G A G G G G G G G G A G A G G A A A G G G A A A A G A A
rs579859466
MGI SNP Detail
Chr19:47154102 Rr548960 1186 bp proximal
SNP A/G A A A A A G A A A A A G G G G G G G G A G A A A A G A G A A A G A A A A A A A A A A A A A A A A
rs242177019
MGI SNP Detail
Chr19:47154109 Rr548960 1179 bp proximal
SNP A/C C A
rs260858369
MGI SNP Detail
Chr19:47154110 Rr548960 1178 bp proximal
SNP A/C C A
rs218488942
MGI SNP Detail
Chr19:47154123 Rr548960 1165 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47201472
MGI SNP Detail
Chr19:47154188 Rr548960 1100 bp proximal
SNP A/C A C C C C
rs45882390
MGI SNP Detail
Chr19:47154294 Rr548960 994 bp proximal
SNP A/T T A A A A
rs50214153
MGI SNP Detail
Chr19:47154348 Rr548960 940 bp proximal
SNP C/T T C C C C
rs231859804
MGI SNP Detail
Chr19:47154374 Rr548960 914 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249353186
MGI SNP Detail
Chr19:47154403 Rr548960 885 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52573460
MGI SNP Detail
Chr19:47154465 Rr548960 823 bp proximal
SNP A/G G A A
rs232795913
MGI SNP Detail
Chr19:47154475 Rr548960 813 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583606723
MGI SNP Detail
Chr19:47154489 Rr548960 799 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585505918
MGI SNP Detail
Chr19:47154490 Rr548960 798 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52445927
MGI SNP Detail
Chr19:47154512 Rr548960 776 bp proximal
SNP C/G G C
rs255672847
MGI SNP Detail
Chr19:47154545 Rr548960 743 bp proximal
SNP C C C C C C C C C C C C C
rs220416065
MGI SNP Detail
Chr19:47154591 Rr548960 697 bp proximal
SNP A/C/T A A A T A A A A T T T T T T T A A T A A A A A A T A A A A A A A A A A A A A A A A C A A A A
rs51829666
MGI SNP Detail
Chr19:47154644 Rr548960 644 bp proximal
SNP G/T T G G G G
rs48045231
MGI SNP Detail
Chr19:47154659 Rr548960 629 bp proximal
SNP C/T T C C C C
rs221077749
MGI SNP Detail
Chr19:47154682 Rr548960 606 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51935098
MGI SNP Detail
Chr19:47154708 Rr548960 580 bp proximal
SNP C/T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47746226
MGI SNP Detail
Chr19:47154727 Rr548960 561 bp proximal
SNP A/G A G G G G
rs49710629
MGI SNP Detail
Chr19:47154729 Rr548960 559 bp proximal
SNP A/G G A A A A
rs253107721
MGI SNP Detail
Chr19:47154770 Rr548960 518 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45728138
MGI SNP Detail
Chr19:47154784 Rr548960 504 bp proximal
SNP A/G A G G G G
rs50944068
MGI SNP Detail
Chr19:47154793 Rr548960 495 bp proximal
SNP A/C C A A A A
rs243527546
MGI SNP Detail
Chr19:47154834 Rr548960 454 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs46900784
MGI SNP Detail
Chr19:47154856 Rr548960 432 bp proximal
SNP C/T C T T
rs49025640
MGI SNP Detail
Chr19:47154857 Rr548960 431 bp proximal
SNP A/G A G G
rs50424914
MGI SNP Detail
Chr19:47154933 Rr548960 355 bp proximal
SNP A/G A G G G
rs46011252
MGI SNP Detail
Chr19:47154939 Rr548960 349 bp proximal
SNP G/T T G G G T
rs46413080
MGI SNP Detail
Chr19:47154947 Rr548960 341 bp proximal
SNP C/G G G C
rs249433399
MGI SNP Detail
Chr19:47154948 Rr548960 340 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45769943
MGI SNP Detail
Chr19:47154951 Rr548960 337 bp proximal
SNP A/C C A A C
rs47055314
MGI SNP Detail
Chr19:47154959 Rr548960 329 bp proximal
SNP A/G G A A G
rs253766875
MGI SNP Detail
Chr19:47155018 Rr548960 270 bp proximal
SNP A/T A A A A T A A A A A T T T T T T T A A T A A A A A T A T A A A T A A A A A A A A A A A A A A A A A A A
rs221108980
MGI SNP Detail
Chr19:47155037 Rr548960 251 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251392593
MGI SNP Detail
Chr19:47155138 Rr548960 150 bp proximal
SNP C/T C C C C C T C C C C C T T T T T T T C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs264218671
MGI SNP Detail
Chr19:47155139 Rr548960 149 bp proximal
SNP C/T C C C C C T C C C C C T T T T T T T C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs221520281
MGI SNP Detail
Chr19:47155234 Rr548960 54 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs237082323
MGI SNP Detail
Chr19:47155239 Rr548960 49 bp proximal
SNP T T T
rs255514974
MGI SNP Detail
Chr19:47155241 Rr548960 47 bp proximal
SNP T T T
rs227120498
MGI SNP Detail
Chr19:47155283 Rr548960 5 bp proximal
SNP T T T
rs239420890
MGI SNP Detail
Chr19:47155290 Rr548960 within coordinates of
SNP G G G
rs257834344
MGI SNP Detail
Chr19:47155318 Rr548960 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs231370975
MGI SNP Detail
Chr19:47155333 Rr548960 within coordinates of
SNP A/G A A A A A G A A A A A A G G G G G G G A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259738209
MGI SNP Detail
Chr19:47155336 Rr548960 within coordinates of
SNP C/G/T C C C C C T C C C C C C T T T T T T T C C T G C C C C C C T C C C C C C C C C C C C C C C C C C T C C C C
rs585862921
MGI SNP Detail
Chr19:47155352 Rr548960 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587396264
MGI SNP Detail
Chr19:47155353 Rr548960 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253308717
MGI SNP Detail
Chr19:47155354 Rr548960 within coordinates of
SNP C/G C G
rs237188028
MGI SNP Detail
Chr19:47155408 Rr548960 within coordinates of
SNP A/G A A A A A A A A A A A A G A G G
rs243492553
MGI SNP Detail
Chr19:47155433 Rr548960 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214324169
MGI SNP Detail
Chr19:47155448 Rr548960 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs231532033
MGI SNP Detail
Chr19:47155461 Rr548960 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253799487
MGI SNP Detail
Chr19:47155544 Rr548960 20 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216344333
MGI SNP Detail
Chr19:47155653 Rr548960 129 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs240415270
MGI SNP Detail
Chr19:47155660 Rr548960 136 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50830491
MGI SNP Detail
Chr19:47155661 Rr548960 137 bp distal
SNP A A A
rs222127966
MGI SNP Detail
Chr19:47155691 Rr548960 167 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236298850
MGI SNP Detail
Chr19:47155723 Rr548960 199 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250843646
MGI SNP Detail
Chr19:47155751 Rr548960 227 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583546524
MGI SNP Detail
Chr19:47155761 Rr548960 237 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586931086
MGI SNP Detail
Chr19:47155767 Rr548960 243 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219630203
MGI SNP Detail
Chr19:47155791 Rr548960 267 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs240297309
MGI SNP Detail
Chr19:47155817 Rr548960 293 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs45813487
MGI SNP Detail
Chr19:47155856 Rr548960 332 bp distal
SNP A/G A G G G
rs231803870
MGI SNP Detail
Chr19:47155862 Rr548960 338 bp distal
SNP A/C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs248046965
MGI SNP Detail
Chr19:47155868 Rr548960 344 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs580740771
MGI SNP Detail
Chr19:47155971 Rr548960 447 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A
rs226657564
MGI SNP Detail
Chr19:47156046 Rr548960 522 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G
rs52253110
MGI SNP Detail
Chr19:47156082 Rr548960 558 bp distal
SNP A/G A G G
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Showing SNP(s) 1 - 100 of 140

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory