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Mouse SNP Summary
Symbol
Name
ID 		Rr549013
regulatory region 549013
MGI:8011145

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228816081
MGI SNP Detail
Alliance Variant		 Chr19:47335583 Gm59322 within coordinates of
Rr549013 1936 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253385119
MGI SNP Detail
Alliance Variant		 Chr19:47335613 Gm59322 within coordinates of
Rr549013 1906 bp proximal
Sh3pxd2a Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262942549
MGI SNP Detail
Alliance Variant		 Chr19:47335646 Gm59322 within coordinates of
Rr549013 1873 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230585241
MGI SNP Detail
Alliance Variant		 Chr19:47335693 Gm59322 within coordinates of
Rr549013 1826 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247507516
MGI SNP Detail
Alliance Variant		 Chr19:47335729 Gm59322 within coordinates of
Rr549013 1790 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223832567
MGI SNP Detail
Alliance Variant		 Chr19:47335752 Gm59322 within coordinates of
Rr549013 1767 bp proximal
Sh3pxd2a Intron
 SNP C/T C T
rs30690517
MGI SNP Detail
Alliance Variant		 Chr19:47335756 Gm59322 within coordinates of
Rr549013 1763 bp proximal
Sh3pxd2a Intron
 SNP A/G G A G A G
rs248546574
MGI SNP Detail
Alliance Variant		 Chr19:47335761 Gm59322 within coordinates of
Rr549013 1758 bp proximal
Sh3pxd2a Intron
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217714876
MGI SNP Detail
Alliance Variant		 Chr19:47335762 Gm59322 within coordinates of
Rr549013 1757 bp proximal
Sh3pxd2a Intron
 SNP C/G C C C C G C C C C G G G C C C C C C C C G C C C C G G C G C G C G C G G G G G C G G G G G G G G
rs246366364
MGI SNP Detail
Alliance Variant		 Chr19:47335795 Gm59322 within coordinates of
Rr549013 1724 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs260905783
MGI SNP Detail
Alliance Variant		 Chr19:47335813 Gm59322 within coordinates of
Rr549013 1706 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256398973
MGI SNP Detail
Alliance Variant		 Chr19:47335859 Gm59322 within coordinates of
Rr549013 1660 bp proximal
Sh3pxd2a Intron
 SNP G G G
rs231336053
MGI SNP Detail
Alliance Variant		 Chr19:47335892 Gm59322 within coordinates of
Rr549013 1627 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251830862
MGI SNP Detail
Alliance Variant		 Chr19:47335910 Gm59322 within coordinates of
Rr549013 1609 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220610179
MGI SNP Detail
Alliance Variant		 Chr19:47335912 Gm59322 within coordinates of
Rr549013 1607 bp proximal
Sh3pxd2a Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs241749919
MGI SNP Detail
Alliance Variant		 Chr19:47335927 Gm59322 within coordinates of
Rr549013 1592 bp proximal
Sh3pxd2a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs264085946
MGI SNP Detail
Alliance Variant		 Chr19:47335955 Gm59322 within coordinates of
Rr549013 1564 bp proximal
Sh3pxd2a Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221195530
MGI SNP Detail
Alliance Variant		 Chr19:47335963 Gm59322 within coordinates of
Rr549013 1556 bp proximal
Sh3pxd2a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241268515
MGI SNP Detail
Alliance Variant		 Chr19:47336031 Gm59322 within coordinates of
Rr549013 1488 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220207374
MGI SNP Detail
Alliance Variant		 Chr19:47336072 Gm59322 within coordinates of
Rr549013 1447 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs241586553
MGI SNP Detail
Alliance Variant		 Chr19:47336078 Gm59322 within coordinates of
Rr549013 1441 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs247581802
MGI SNP Detail
Alliance Variant		 Chr19:47336105 Gm59322 within coordinates of
Rr549013 1414 bp proximal
Sh3pxd2a Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259416709
MGI SNP Detail
Alliance Variant		 Chr19:47336132 Gm59322 within coordinates of
Rr549013 1387 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229434377
MGI SNP Detail
Alliance Variant		 Chr19:47336135 Gm59322 within coordinates of
Rr549013 1384 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259239464
MGI SNP Detail
Alliance Variant		 Chr19:47336198 Gm59322 within coordinates of
Rr549013 1321 bp proximal
Sh3pxd2a Intron
 SNP A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217677939
MGI SNP Detail
Alliance Variant		 Chr19:47336208 Gm59322 within coordinates of
Rr549013 1311 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228904474
MGI SNP Detail
Alliance Variant		 Chr19:47336209 Gm59322 within coordinates of
Rr549013 1310 bp proximal
Sh3pxd2a Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30892503
MGI SNP Detail
Alliance Variant		 Chr19:47336230 Gm59322 within coordinates of
Rr549013 1289 bp proximal
Sh3pxd2a Intron
 SNP C/G/T C T C T G G
rs215159763
MGI SNP Detail
Alliance Variant		 Chr19:47336259 Gm59322 within coordinates of
Rr549013 1260 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs231409442
MGI SNP Detail
Alliance Variant		 Chr19:47336277 Gm59322 within coordinates of
Rr549013 1242 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239125694
MGI SNP Detail
Alliance Variant		 Chr19:47336287 Gm59322 within coordinates of
Rr549013 1232 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs265246206
MGI SNP Detail
Alliance Variant		 Chr19:47336331 Gm59322 within coordinates of
Rr549013 1188 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs235020386
MGI SNP Detail
Alliance Variant		 Chr19:47336406 Gm59322 within coordinates of
Rr549013 1113 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263885118
MGI SNP Detail
Alliance Variant		 Chr19:47336407 Gm59322 within coordinates of
Rr549013 1112 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221808609
MGI SNP Detail
Alliance Variant		 Chr19:47336424 Gm59322 within coordinates of
Rr549013 1095 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229953261
MGI SNP Detail
Alliance Variant		 Chr19:47336449 Gm59322 within coordinates of
Rr549013 1070 bp proximal
Sh3pxd2a Intron
 SNP A/G A G
rs254165150
MGI SNP Detail
Alliance Variant		 Chr19:47336455 Gm59322 within coordinates of
Rr549013 1064 bp proximal
Sh3pxd2a Intron
 SNP C/T C T
rs219609916
MGI SNP Detail
Alliance Variant		 Chr19:47336478 Gm59322 within coordinates of
Rr549013 1041 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241609625
MGI SNP Detail
Alliance Variant		 Chr19:47336490 Gm59322 within coordinates of
Rr549013 1029 bp proximal
Sh3pxd2a Intron
 SNP C/G G G G G C G G G G C C C G G G G G G G G C G G G G C C G C G C G C G C C C C C C G C C C C C C C C C C C C
rs259456276
MGI SNP Detail
Alliance Variant		 Chr19:47336492 Gm59322 within coordinates of
Rr549013 1027 bp proximal
Sh3pxd2a Intron
 SNP A/C A A A A C A A A A C C C A A A A A A A A C A A A A C C A C A C A C A C C C C C C A C C C C C C C C C C C C
rs211788678
MGI SNP Detail
Alliance Variant		 Chr19:47336507 Gm59322 within coordinates of
Rr549013 1012 bp proximal
Sh3pxd2a Intron
 SNP A/G A G
rs586333790
MGI SNP Detail
Alliance Variant		 Chr19:47336525 Gm59322 within coordinates of
Rr549013 994 bp proximal
Sh3pxd2a Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31268679
MGI SNP Detail
Alliance Variant		 Chr19:47336553 Gm59322 within coordinates of
Rr549013 966 bp proximal
Sh3pxd2a Intron
 SNP C/T C T C T
rs265872284
MGI SNP Detail
Alliance Variant		 Chr19:47336556 Gm59322 within coordinates of
Rr549013 963 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C T C C C T T C C C C C C C C C C C T C C C C T T T T T C T T T T T T T T T
rs228431250
MGI SNP Detail
Alliance Variant		 Chr19:47336566 Gm59322 within coordinates of
Rr549013 953 bp proximal
Sh3pxd2a Intron
 SNP A/C A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A
rs252152288
MGI SNP Detail
Alliance Variant		 Chr19:47336569 Gm59322 within coordinates of
Rr549013 950 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G A G G A G A A
rs580382041
MGI SNP Detail
Alliance Variant		 Chr19:47336574 Gm59322 within coordinates of
Rr549013 945 bp proximal
Sh3pxd2a Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228940339
MGI SNP Detail
Alliance Variant		 Chr19:47336651 Gm59322 within coordinates of
Rr549013 868 bp proximal
Sh3pxd2a Intron
 SNP A/C A C
rs247664858
MGI SNP Detail
Alliance Variant		 Chr19:47336657 Gm59322 within coordinates of
Rr549013 862 bp proximal
Sh3pxd2a Intron
 SNP A/T T A
rs245966926
MGI SNP Detail
Alliance Variant		 Chr19:47336700 Gm59322 within coordinates of
Rr549013 819 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215154413
MGI SNP Detail
Alliance Variant		 Chr19:47336716 Gm59322 within coordinates of
Rr549013 803 bp proximal
Sh3pxd2a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215708876
MGI SNP Detail
Alliance Variant		 Chr19:47336735 Gm59322 within coordinates of
Rr549013 784 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs233565474
MGI SNP Detail
Alliance Variant		 Chr19:47336736 Gm59322 within coordinates of
Rr549013 783 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs258939350
MGI SNP Detail
Alliance Variant		 Chr19:47336764 Gm59322 within coordinates of
Rr549013 755 bp proximal
Sh3pxd2a Intron
 SNP G G G
rs234877534
MGI SNP Detail
Alliance Variant		 Chr19:47336829 Gm59322 within coordinates of
Rr549013 690 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262520998
MGI SNP Detail
Alliance Variant		 Chr19:47336863 Gm59322 within coordinates of
Rr549013 656 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215485962
MGI SNP Detail
Alliance Variant		 Chr19:47336883 Gm59322 within coordinates of
Rr549013 636 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs236612962
MGI SNP Detail
Alliance Variant		 Chr19:47336922 Gm59322 within coordinates of
Rr549013 597 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs583958294
MGI SNP Detail
Alliance Variant		 Chr19:47336937 Gm59322 within coordinates of
Rr549013 582 bp proximal
Sh3pxd2a Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261769895
MGI SNP Detail
Alliance Variant		 Chr19:47336942 Gm59322 within coordinates of
Rr549013 577 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs587573351
MGI SNP Detail
Alliance Variant		 Chr19:47336953 Gm59322 within coordinates of
Rr549013 566 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223777931
MGI SNP Detail
Alliance Variant		 Chr19:47336958 Gm59322 within coordinates of
Rr549013 561 bp proximal
Sh3pxd2a Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218255395
MGI SNP Detail
Alliance Variant		 Chr19:47337056 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 463 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs241648163
MGI SNP Detail
Alliance Variant		 Chr19:47337060 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 459 bp proximal
Sh3pxd2a Intron
 SNP G/T T G
rs252664971
MGI SNP Detail
Alliance Variant		 Chr19:47337113 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 406 bp proximal
Sh3pxd2a Intron
 SNP G G G
rs221574241
MGI SNP Detail
Alliance Variant		 Chr19:47337114 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 405 bp proximal
Sh3pxd2a Intron
 SNP C C C
rs256000055
MGI SNP Detail
Alliance Variant		 Chr19:47337144 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 375 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C T C C C C T T T C C C C C C C C T C C C C T T C T C T C T C T T T T T T C T T T T T T T T T T T T
rs224973367
MGI SNP Detail
Alliance Variant		 Chr19:47337154 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 365 bp proximal
Sh3pxd2a Intron
 SNP A/G A A A G A A A A G G G A A A A A A A G G A G A A G G G G A G A G G G G G G G G G G G G G G G G G G G G G
rs245682825
MGI SNP Detail
Alliance Variant		 Chr19:47337161 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 358 bp proximal
Sh3pxd2a Intron
 SNP A/T A A A T A A A A T T T A A A A A A A A T A A A A T T A T A T A T A T T T T T T A T T T T T T T T T T T T
rs257223103
MGI SNP Detail
Alliance Variant		 Chr19:47337163 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 356 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C T C C C C T T T C C C C C C C C T C C C C T T C T C T C T C T T T T T T C T T T T T T T C T T T T
rs247985348
MGI SNP Detail
Alliance Variant		 Chr19:47337177 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 342 bp proximal
Sh3pxd2a Intron
 SNP A/C C A
rs236033520
MGI SNP Detail
Alliance Variant		 Chr19:47337222 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 297 bp proximal
Sh3pxd2a Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262736959
MGI SNP Detail
Alliance Variant		 Chr19:47337239 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 280 bp proximal
Sh3pxd2a Intron
 SNP T T T
rs213819422
MGI SNP Detail
Alliance Variant		 Chr19:47337245 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 274 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234880427
MGI SNP Detail
Alliance Variant		 Chr19:47337274 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 245 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230055937
MGI SNP Detail
Alliance Variant		 Chr19:47337286 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 233 bp proximal
Sh3pxd2a Intron
 SNP G/T G T
rs241991673
MGI SNP Detail
Alliance Variant		 Chr19:47337322 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 197 bp proximal
Sh3pxd2a Intron
 SNP C/T C T
rs264647404
MGI SNP Detail
Alliance Variant		 Chr19:47337344 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 175 bp proximal
Sh3pxd2a Intron
 SNP A/T A T
rs261742986
MGI SNP Detail
Alliance Variant		 Chr19:47337356 Cpgi11030 within coordinates of
Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 163 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220794191
MGI SNP Detail
Alliance Variant		 Chr19:47337374 Gm59322 within coordinates of
Rr549012 within coordinates of
Rr549013 145 bp proximal
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247183222
MGI SNP Detail
Alliance Variant		 Chr19:47337417 Gm59322 within coordinates of
Rr549013 102 bp proximal
Sh3pxd2a Intron
 SNP C/T T T T T C T T T T C C C T T T T T T T T C T T T T C C T C T C T C T C C C C C C T C C C C C C C C C C C C
rs256100840
MGI SNP Detail
Alliance Variant		 Chr19:47337435 Gm59322 within coordinates of
Rr549013 84 bp proximal
Sh3pxd2a Intron
 SNP C/T C C C C T C C C C T T T C C C C C C C C T C C C C T T C T C T C T C T T T T T T C T T T T T T T T T T T T
rs229170059
MGI SNP Detail
Alliance Variant		 Chr19:47337441 Gm59322 within coordinates of
Rr549013 78 bp proximal
Sh3pxd2a Intron
 SNP A/G A G
rs247715280
MGI SNP Detail
Alliance Variant		 Chr19:47337451 Gm59322 within coordinates of
Rr549013 68 bp proximal
Sh3pxd2a Intron
 SNP G G G
rs215588214
MGI SNP Detail
Alliance Variant		 Chr19:47337512 Gm59322 within coordinates of
Rr549013 7 bp proximal
Sh3pxd2a Intron
 SNP A A A
rs234540693
MGI SNP Detail
Alliance Variant		 Chr19:47337531 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs227159359
MGI SNP Detail
Alliance Variant		 Chr19:47337536 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C C C
rs264853338
MGI SNP Detail
Alliance Variant		 Chr19:47337579 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP A/G A A A A G A A A A G G G A A A A A A A A G A A A A G G A G A G A G A G G G G G G A G G G G G G G A G G G G
rs256002470
MGI SNP Detail
Alliance Variant		 Chr19:47337617 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP A A A
rs245596728
MGI SNP Detail
Alliance Variant		 Chr19:47337619 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213850685
MGI SNP Detail
Alliance Variant		 Chr19:47337626 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234976218
MGI SNP Detail
Alliance Variant		 Chr19:47337674 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs246641376
MGI SNP Detail
Alliance Variant		 Chr19:47337676 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C
rs584987623
MGI SNP Detail
Alliance Variant		 Chr19:47337682 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A
rs387035208
MGI SNP Detail
Alliance Variant		 Chr19:47337701 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C/T C C C C T C C C C T C C C C C C C C T C C C C T T C T C T C C T T T T C T T T T T T T
rs581085329
MGI SNP Detail
Alliance Variant		 Chr19:47337712 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C/T T T T T C T T T T C C T T T T T T T T C T T T T C C T C T C T T C C C C T C C C C C C
rs242122641
MGI SNP Detail
Alliance Variant		 Chr19:47337742 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585064199
MGI SNP Detail
Alliance Variant		 Chr19:47337752 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579305472
MGI SNP Detail
Alliance Variant		 Chr19:47337755 Gm59322 within coordinates of
Rr549013 within coordinates of
Sh3pxd2a Intron
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31079909
MGI SNP Detail
Alliance Variant		 Chr19:47337787 Gm59322 within coordinates of
Rr549013 14 bp distal
Sh3pxd2a Intron
 SNP A/G A G A G A A G G G A G G G G G G G
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Showing SNP(s) 1 - 100 of 171
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory