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Mouse SNP Summary
Symbol
Name
ID
Rr549139
regulatory region 549139
MGI:8011271

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583476934
MGI SNP Detail
Alliance Variant
Chr19:47815300 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1948 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30944537
MGI SNP Detail
Alliance Variant
Chr19:47815312 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1936 bp proximal
SNP A/C C A
rs30323325
MGI SNP Detail
Alliance Variant
Chr19:47815320 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1928 bp proximal
SNP A/C A C
rs581151444
MGI SNP Detail
Alliance Variant
Chr19:47815328 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1920 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584285905
MGI SNP Detail
Alliance Variant
Chr19:47815330 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1918 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578480351
MGI SNP Detail
Alliance Variant
Chr19:47815332 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1916 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243656164
MGI SNP Detail
Alliance Variant
Chr19:47815370 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1878 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262623177
MGI SNP Detail
Alliance Variant
Chr19:47815389 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1859 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229907489
MGI SNP Detail
Alliance Variant
Chr19:47815408 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1840 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36687551
MGI SNP Detail
Alliance Variant
Chr19:47815413 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1835 bp proximal
SNP A/C A A A A A A C A A A C A A C A
rs215408241
MGI SNP Detail
Alliance Variant
Chr19:47815448 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1800 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229510656
MGI SNP Detail
Alliance Variant
Chr19:47815470 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1778 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38059012
MGI SNP Detail
Alliance Variant
Chr19:47815482 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1766 bp proximal
SNP A/G A A A A A A G A A A A G A A G A G
rs213273624
MGI SNP Detail
Alliance Variant
Chr19:47815554 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1694 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T A A T T T T T A T T T T T T A T T T T T T T T T T T T
rs215922535
MGI SNP Detail
Alliance Variant
Chr19:47815555 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1693 bp proximal
SNP T T T
rs262474376
MGI SNP Detail
Alliance Variant
Chr19:47815568 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1680 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213867667
MGI SNP Detail
Alliance Variant
Chr19:47815626 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1622 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs241265063
MGI SNP Detail
Alliance Variant
Chr19:47815657 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1591 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G A G G G G G G A G G G G G G G G G G G G
rs258855315
MGI SNP Detail
Alliance Variant
Chr19:47815781 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1467 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220641196
MGI SNP Detail
Alliance Variant
Chr19:47815802 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1446 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241470386
MGI SNP Detail
Alliance Variant
Chr19:47815825 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1423 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252603387
MGI SNP Detail
Alliance Variant
Chr19:47815841 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1407 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218608257
MGI SNP Detail
Alliance Variant
Chr19:47815866 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1382 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T T T T T C T T T T T T C T T T T T T T T T T T T
rs241180683
MGI SNP Detail
Alliance Variant
Chr19:47815888 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1360 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265185576
MGI SNP Detail
Alliance Variant
Chr19:47815891 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1357 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37481889
MGI SNP Detail
Alliance Variant
Chr19:47815900 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1348 bp proximal
SNP C/G G G G G G G G G G G G G G G G G C
rs248642729
MGI SNP Detail
Alliance Variant
Chr19:47815907 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1341 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258924594
MGI SNP Detail
Alliance Variant
Chr19:47815937 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1311 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229457398
MGI SNP Detail
Alliance Variant
Chr19:47815959 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1289 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248235164
MGI SNP Detail
Alliance Variant
Chr19:47815960 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1288 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257058173
MGI SNP Detail
Alliance Variant
Chr19:47815961 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1287 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228706701
MGI SNP Detail
Alliance Variant
Chr19:47815971 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1277 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs585257882
MGI SNP Detail
Alliance Variant
Chr19:47816042 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1206 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579277120
MGI SNP Detail
Alliance Variant
Chr19:47816052 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1196 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs582353949
MGI SNP Detail
Alliance Variant
Chr19:47816053 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1195 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586223372
MGI SNP Detail
Alliance Variant
Chr19:47816054 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1194 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578597484
MGI SNP Detail
Alliance Variant
Chr19:47816137 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1111 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582367793
MGI SNP Detail
Alliance Variant
Chr19:47816141 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1107 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585502058
MGI SNP Detail
Alliance Variant
Chr19:47816177 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1071 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A
rs231604460
MGI SNP Detail
Alliance Variant
Chr19:47816211 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1037 bp proximal
SNP A/G A A A A A A A A A A G A A G A G G A G A A A A A
rs579675556
MGI SNP Detail
Alliance Variant
Chr19:47816215 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1033 bp proximal
SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G
rs583741850
MGI SNP Detail
Alliance Variant
Chr19:47816219 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1029 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583561198
MGI SNP Detail
Alliance Variant
Chr19:47816247 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 1001 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251886664
MGI SNP Detail
Alliance Variant
Chr19:47816297 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 951 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214282333
MGI SNP Detail
Alliance Variant
Chr19:47816316 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 932 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238778776
MGI SNP Detail
Alliance Variant
Chr19:47816327 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 921 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586638499
MGI SNP Detail
Alliance Variant
Chr19:47816367 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 881 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580580777
MGI SNP Detail
Alliance Variant
Chr19:47816399 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 849 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245423504
MGI SNP Detail
Alliance Variant
Chr19:47816649 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 599 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38783709
MGI SNP Detail
Alliance Variant
Chr19:47816687 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 561 bp proximal
SNP C/T C C C C C C C C C C T C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234545830
MGI SNP Detail
Alliance Variant
Chr19:47816708 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 540 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252499134
MGI SNP Detail
Alliance Variant
Chr19:47816729 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 519 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221344814
MGI SNP Detail
Alliance Variant
Chr19:47816762 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 486 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236151261
MGI SNP Detail
Alliance Variant
Chr19:47816770 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 478 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257870451
MGI SNP Detail
Alliance Variant
Chr19:47816788 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 460 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221663482
MGI SNP Detail
Alliance Variant
Chr19:47816891 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 357 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36633568
MGI SNP Detail
Alliance Variant
Chr19:47816920 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 328 bp proximal
SNP A/G A A A A A A A A A A A A A G A
rs246016590
MGI SNP Detail
Alliance Variant
Chr19:47816951 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 297 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258796050
MGI SNP Detail
Alliance Variant
Chr19:47816952 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 296 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30314863
MGI SNP Detail
Alliance Variant
Chr19:47816957 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 291 bp proximal
SNP C/T C C C C C C T C C C C C C C C C C T
rs241811567
MGI SNP Detail
Alliance Variant
Chr19:47816984 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 264 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257006098
MGI SNP Detail
Alliance Variant
Chr19:47817020 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 228 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36424980
MGI SNP Detail
Alliance Variant
Chr19:47817025 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 223 bp proximal
SNP C/G C C C C C C G C C C C C C C C
rs30983583
MGI SNP Detail
Alliance Variant
Chr19:47817033 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 215 bp proximal
SNP A/C C C C C C C A A C C C C A C C A C A
rs262588870
MGI SNP Detail
Alliance Variant
Chr19:47817041 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 207 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233183872
MGI SNP Detail
Alliance Variant
Chr19:47817053 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 195 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36875417
MGI SNP Detail
Alliance Variant
Chr19:47817067 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 181 bp proximal
SNP C/T T T T T T T C T T T T T T T T
rs217374557
MGI SNP Detail
Alliance Variant
Chr19:47817094 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 154 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234504505
MGI SNP Detail
Alliance Variant
Chr19:47817152 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 96 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584065971
MGI SNP Detail
Alliance Variant
Chr19:47817225 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 23 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37092150
MGI SNP Detail
Alliance Variant
Chr19:47817261 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C T
rs213074901
MGI SNP Detail
Alliance Variant
Chr19:47817262 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234575282
MGI SNP Detail
Alliance Variant
Chr19:47817283 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37939543
MGI SNP Detail
Alliance Variant
Chr19:47817326 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G A A A A A A G A A A A A A A A
rs222585544
MGI SNP Detail
Alliance Variant
Chr19:47817345 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234757877
MGI SNP Detail
Alliance Variant
Chr19:47817371 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252478755
MGI SNP Detail
Alliance Variant
Chr19:47817380 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223181927
MGI SNP Detail
Alliance Variant
Chr19:47817385 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241781534
MGI SNP Detail
Alliance Variant
Chr19:47817420 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256078042
MGI SNP Detail
Alliance Variant
Chr19:47817451 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220427357
MGI SNP Detail
Alliance Variant
Chr19:47817473 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 within coordinates of
SNP A/G G G G G G G G G G A G G G G G G G G G G G G A G G G A A G G G G G A G G G G G G A G A G G G A G A G G G G
rs244513055
MGI SNP Detail
Alliance Variant
Chr19:47817580 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 4 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265147055
MGI SNP Detail
Alliance Variant
Chr19:47817605 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 29 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232684244
MGI SNP Detail
Alliance Variant
Chr19:47817630 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 54 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G A G G G G G G A G G G G G G G A G G G G
rs239621846
MGI SNP Detail
Alliance Variant
Chr19:47817658 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 82 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C T T C C C C C T C C C C C C T C C C C C C C C C C C C
rs52583201
MGI SNP Detail
Alliance Variant
Chr19:47817672 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 96 bp distal
SNP A/G G G A G
rs579200077
MGI SNP Detail
Alliance Variant
Chr19:47817811 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 235 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs581562009
MGI SNP Detail
Alliance Variant
Chr19:47818158 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 582 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs584881231
MGI SNP Detail
Alliance Variant
Chr19:47818159 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 583 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259908534
MGI SNP Detail
Alliance Variant
Chr19:47818208 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 632 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228574961
MGI SNP Detail
Alliance Variant
Chr19:47818252 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 676 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243212785
MGI SNP Detail
Alliance Variant
Chr19:47818262 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 686 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212235583
MGI SNP Detail
Alliance Variant
Chr19:47818286 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 710 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227971658
MGI SNP Detail
Alliance Variant
Chr19:47818290 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 714 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251345359
MGI SNP Detail
Alliance Variant
Chr19:47818307 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 731 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214076225
MGI SNP Detail
Alliance Variant
Chr19:47818313 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 737 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234721608
MGI SNP Detail
Alliance Variant
Chr19:47818344 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 768 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252844330
MGI SNP Detail
Alliance Variant
Chr19:47818353 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 777 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217080452
MGI SNP Detail
Alliance Variant
Chr19:47818374 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 798 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235307731
MGI SNP Detail
Alliance Variant
Chr19:47818385 Cfap43 Intron
Cfap43 Noncoding-Transcript-Variant
Rr549139 809 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 123

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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