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Mouse SNP Summary
Symbol
Name
ID
Rr549575
regulatory region 549575
MGI:8011707

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213419346
MGI SNP Detail
Alliance Variant
Chr19:53625382 Rr549575 1974 bp proximal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs236411564
MGI SNP Detail
Alliance Variant
Chr19:53625383 Rr549575 1973 bp proximal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs262489908
MGI SNP Detail
Alliance Variant
Chr19:53625423 Rr549575 1933 bp proximal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215857594
MGI SNP Detail
Alliance Variant
Chr19:53625475 Rr549575 1881 bp proximal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235158786
MGI SNP Detail
Alliance Variant
Chr19:53625499 Rr549575 1857 bp proximal
Smc3 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254784500
MGI SNP Detail
Alliance Variant
Chr19:53625515 Rr549575 1841 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223841417
MGI SNP Detail
Alliance Variant
Chr19:53625545 Rr549575 1811 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237462589
MGI SNP Detail
Alliance Variant
Chr19:53625562 Rr549575 1794 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256573247
MGI SNP Detail
Alliance Variant
Chr19:53625572 Rr549575 1784 bp proximal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220783894
MGI SNP Detail
Alliance Variant
Chr19:53625616 Rr549575 1740 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242912937
MGI SNP Detail
Alliance Variant
Chr19:53625709 Rr549575 1647 bp proximal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49816686
MGI SNP Detail
Alliance Variant
Chr19:53625764 Rr549575 1592 bp proximal
Smc3 Intron
SNP G/T T T T T T T G T T T G T T G G
rs223929439
MGI SNP Detail
Alliance Variant
Chr19:53625778 Rr549575 1578 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239713157
MGI SNP Detail
Alliance Variant
Chr19:53625783 Rr549575 1573 bp proximal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46117420
MGI SNP Detail
Alliance Variant
Chr19:53625816 Rr549575 1540 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A G A
rs229225440
MGI SNP Detail
Alliance Variant
Chr19:53625921 Rr549575 1435 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs587575136
MGI SNP Detail
Alliance Variant
Chr19:53625932 Rr549575 1424 bp proximal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580712857
MGI SNP Detail
Alliance Variant
Chr19:53626022 Rr549575 1334 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584457427
MGI SNP Detail
Alliance Variant
Chr19:53626028 Rr549575 1328 bp proximal
Smc3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs578680534
MGI SNP Detail
Alliance Variant
Chr19:53626077 Rr549575 1279 bp proximal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242189931
MGI SNP Detail
Alliance Variant
Chr19:53626131 Rr549575 1225 bp proximal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261905691
MGI SNP Detail
Alliance Variant
Chr19:53626132 Rr549575 1224 bp proximal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs230400975
MGI SNP Detail
Alliance Variant
Chr19:53626281 Rr549575 1075 bp proximal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251714621
MGI SNP Detail
Alliance Variant
Chr19:53626343 Rr549575 1013 bp proximal
Smc3 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216405394
MGI SNP Detail
Alliance Variant
Chr19:53626519 Rr549575 837 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234824711
MGI SNP Detail
Alliance Variant
Chr19:53626532 Rr549575 824 bp proximal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs248091775
MGI SNP Detail
Alliance Variant
Chr19:53626556 Rr549575 800 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217740094
MGI SNP Detail
Alliance Variant
Chr19:53626566 Rr549575 790 bp proximal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs230247243
MGI SNP Detail
Alliance Variant
Chr19:53626616 Rr549575 740 bp proximal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261712822
MGI SNP Detail
Alliance Variant
Chr19:53626653 Rr549575 703 bp proximal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222857357
MGI SNP Detail
Alliance Variant
Chr19:53626656 Rr549575 700 bp proximal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237755766
MGI SNP Detail
Alliance Variant
Chr19:53626671 Rr549575 685 bp proximal
Smc3 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs257606062
MGI SNP Detail
Alliance Variant
Chr19:53626684 Rr549573 within coordinates of
Rr549575 672 bp proximal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220570068
MGI SNP Detail
Alliance Variant
Chr19:53626703 Rr549575 653 bp proximal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239663830
MGI SNP Detail
Alliance Variant
Chr19:53626941 Rr549575 415 bp proximal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs258658784
MGI SNP Detail
Alliance Variant
Chr19:53627059 Rr549575 297 bp proximal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs51244857
MGI SNP Detail
Alliance Variant
Chr19:53627098 Rr549575 258 bp proximal
Smc3 Intron
SNP C/T C C C C C C C C C C T C C T C
rs241189572
MGI SNP Detail
Alliance Variant
Chr19:53627105 Rr549575 251 bp proximal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51746615
MGI SNP Detail
Alliance Variant
Chr19:53627313 Rr549575 43 bp proximal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G A G
rs229688809
MGI SNP Detail
Alliance Variant
Chr19:53627353 Rr549575 3 bp proximal
Smc3 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256150679
MGI SNP Detail
Alliance Variant
Chr19:53627354 Rr549575 2 bp proximal
Smc3 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263244084
MGI SNP Detail
Alliance Variant
Chr19:53627364 Rr549575 within coordinates of
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228200593
MGI SNP Detail
Alliance Variant
Chr19:53627410 Rr549575 33 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248079998
MGI SNP Detail
Alliance Variant
Chr19:53627450 Rr549575 73 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs49645588
MGI SNP Detail
Alliance Variant
Chr19:53627478 Rr549575 101 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A G A A G A
rs230197512
MGI SNP Detail
Alliance Variant
Chr19:53627485 Rr549575 108 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48315525
MGI SNP Detail
Alliance Variant
Chr19:53627590 Rr549575 213 bp distal
Smc3 Intron
SNP A/C A A A A A A C A A A A A A A C
rs214655715
MGI SNP Detail
Alliance Variant
Chr19:53627592 Rr549575 215 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs237244456
MGI SNP Detail
Alliance Variant
Chr19:53627618 Rr549575 241 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263051992
MGI SNP Detail
Alliance Variant
Chr19:53627653 Rr549575 276 bp distal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220546792
MGI SNP Detail
Alliance Variant
Chr19:53627948 Rr549575 571 bp distal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs233421064
MGI SNP Detail
Alliance Variant
Chr19:53628043 Rr549575 666 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252356336
MGI SNP Detail
Alliance Variant
Chr19:53628085 Rr549575 708 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222409510
MGI SNP Detail
Alliance Variant
Chr19:53628092 Rr549575 715 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243635338
MGI SNP Detail
Alliance Variant
Chr19:53628112 Rr549575 735 bp distal
Smc3 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256227541
MGI SNP Detail
Alliance Variant
Chr19:53628117 Rr549575 740 bp distal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222087079
MGI SNP Detail
Alliance Variant
Chr19:53628188 Rr549575 811 bp distal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243923918
MGI SNP Detail
Alliance Variant
Chr19:53628226 Rr549575 849 bp distal
Smc3 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs259007797
MGI SNP Detail
Alliance Variant
Chr19:53628236 Rr549575 859 bp distal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs228191600
MGI SNP Detail
Alliance Variant
Chr19:53628283 Rr549575 906 bp distal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242196149
MGI SNP Detail
Alliance Variant
Chr19:53628286 Rr549575 909 bp distal
Smc3 Intron
SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T C T T T T T T T G T T T T
rs261315541
MGI SNP Detail
Alliance Variant
Chr19:53628287 Rr549575 910 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs584561380
MGI SNP Detail
Alliance Variant
Chr19:53628291 Rr549575 914 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs578867076
MGI SNP Detail
Alliance Variant
Chr19:53628302 Rr549575 925 bp distal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs582552925
MGI SNP Detail
Alliance Variant
Chr19:53628311 Rr549575 934 bp distal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs227685876
MGI SNP Detail
Alliance Variant
Chr19:53628314 Rr549575 937 bp distal
Smc3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254325232
MGI SNP Detail
Alliance Variant
Chr19:53628330 Rr549575 953 bp distal
Smc3 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs585139609
MGI SNP Detail
Alliance Variant
Chr19:53628346 Rr549575 969 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214205652
MGI SNP Detail
Alliance Variant
Chr19:53628418 Rr549575 1041 bp distal
Smc3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs231621818
MGI SNP Detail
Alliance Variant
Chr19:53628435 Rr549575 1058 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A G A A A G A A G A
rs252556392
MGI SNP Detail
Alliance Variant
Chr19:53628443 Rr549575 1066 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216212913
MGI SNP Detail
Alliance Variant
Chr19:53628446 Rr549575 1069 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs233362412
MGI SNP Detail
Alliance Variant
Chr19:53628505 Rr549575 1128 bp distal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252428807
MGI SNP Detail
Alliance Variant
Chr19:53628592 Rr549575 1215 bp distal
Smc3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A C A
rs217179541
MGI SNP Detail
Alliance Variant
Chr19:53628604 Rr549575 1227 bp distal
Smc3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234279722
MGI SNP Detail
Alliance Variant
Chr19:53628632 Rr549575 1255 bp distal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261290367
MGI SNP Detail
Alliance Variant
Chr19:53628640 Rr549575 1263 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs222539225
MGI SNP Detail
Alliance Variant
Chr19:53628697 Rr549575 1320 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs50509259
MGI SNP Detail
Alliance Variant
Chr19:53628720 Rr549575 1343 bp distal
Smc3 Intron
SNP C/G G G G G G G G G G G C G G C G
rs48804206
MGI SNP Detail
Alliance Variant
Chr19:53628755 Rr549575 1378 bp distal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A T A
rs221729481
MGI SNP Detail
Alliance Variant
Chr19:53628766 Rr549575 1389 bp distal
Smc3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50347567
MGI SNP Detail
Alliance Variant
Chr19:53628849 Rr549575 1472 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G A G G G G
rs52506350
MGI SNP Detail
Alliance Variant
Chr19:53628899 Rr549575 1522 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G A G G G G
rs579383531
MGI SNP Detail
Alliance Variant
Chr19:53628904 Rr549575 1527 bp distal
Smc3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs52516839
MGI SNP Detail
Alliance Variant
Chr19:53628907 Rr549575 1530 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A G A
rs581968760
MGI SNP Detail
Alliance Variant
Chr19:53628910 Rr549575 1533 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585634123
MGI SNP Detail
Alliance Variant
Chr19:53628915 Rr549575 1538 bp distal
Smc3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241896239
MGI SNP Detail
Alliance Variant
Chr19:53628966 Rr549575 1589 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs261381846
MGI SNP Detail
Alliance Variant
Chr19:53628979 Rr549575 1602 bp distal
Smc3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228460606
MGI SNP Detail
Alliance Variant
Chr19:53629005 Rr549575 1628 bp distal
Smc3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242224830
MGI SNP Detail
Alliance Variant
Chr19:53629144 Rr549575 1767 bp distal
Smc3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46024162
MGI SNP Detail
Alliance Variant
Chr19:53629302 Rr549575 1925 bp distal
Smc3 Coding-Synonymous
SNP C/T T T T T T T T T T T C T T C T
rs231245840
MGI SNP Detail
Alliance Variant
Chr19:53629311 Rr549575 1934 bp distal
Smc3 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51662132
MGI SNP Detail
Alliance Variant
Chr19:53629314 Rr549575 1937 bp distal
Smc3 Coding-Synonymous
SNP A/G G G G G G G A G G G G G G G G
rs216289094
MGI SNP Detail
Alliance Variant
Chr19:53629353 Rr549575 1976 bp distal
Smc3 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228723274
MGI SNP Detail
Alliance Variant
Chr19:53629359 Rr549575 1982 bp distal
Smc3 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247711076
MGI SNP Detail
Alliance Variant
Chr19:53629374 Rr549575 1997 bp distal
Smc3 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 97 of 97

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory