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Mouse SNP Summary
Symbol
Name
ID
Rr549922
regulatory region 549922
MGI:8012054

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217947246
MGI SNP Detail
Alliance Variant
Chr19:55881637 Rr549922 1817 bp proximal
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs236328008
MGI SNP Detail
Alliance Variant
Chr19:55881735 Rr549922 1719 bp proximal
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249498875
MGI SNP Detail
Alliance Variant
Chr19:55881966 Rr549920 within coordinates of
Rr549922 1488 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246081182
MGI SNP Detail
Alliance Variant
Chr19:55881982 Rr549920 within coordinates of
Rr549922 1472 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP T T T
rs231408815
MGI SNP Detail
Alliance Variant
Chr19:55882007 Rr549920 within coordinates of
Rr549922 1447 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs257636795
MGI SNP Detail
Alliance Variant
Chr19:55882008 Rr549920 within coordinates of
Rr549922 1446 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223831881
MGI SNP Detail
Alliance Variant
Chr19:55882020 Rr549920 within coordinates of
Rr549922 1434 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245934543
MGI SNP Detail
Alliance Variant
Chr19:55882021 Rr549920 within coordinates of
Rr549922 1433 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263995365
MGI SNP Detail
Alliance Variant
Chr19:55882089 Rr549920 within coordinates of
Rr549922 1365 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223111662
MGI SNP Detail
Alliance Variant
Chr19:55882155 Rr549920 within coordinates of
Rr549922 1299 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs236223349
MGI SNP Detail
Alliance Variant
Chr19:55882199 Rr549920 within coordinates of
Rr549922 1255 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs584517563
MGI SNP Detail
Alliance Variant
Chr19:55882283 Rr549920 within coordinates of
Rr549922 1171 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs579357767
MGI SNP Detail
Alliance Variant
Chr19:55882534 Rr549922 920 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262856051
MGI SNP Detail
Alliance Variant
Chr19:55883292 Rr549922 162 bp proximal
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A G
rs254879404
MGI SNP Detail
Alliance Variant
Chr19:55883686 Rr549922 within coordinates of
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225549762
MGI SNP Detail
Alliance Variant
Chr19:55883804 Rr549922 within coordinates of
Tcf7l2 Intron
Tcf7l2 mRNA-UTR
Tcf7l2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs247133445
MGI SNP Detail
Alliance Variant
Chr19:55884075 Cpgi11085 within coordinates of
Rr549922 123 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
Tcf7l2 Splice-Site
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263263768
MGI SNP Detail
Alliance Variant
Chr19:55884094 Cpgi11085 within coordinates of
Rr549922 142 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs233238864
MGI SNP Detail
Alliance Variant
Chr19:55884112 Cpgi11085 within coordinates of
Rr549922 160 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254007070
MGI SNP Detail
Alliance Variant
Chr19:55884165 Cpgi11085 within coordinates of
Rr549922 213 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217457274
MGI SNP Detail
Alliance Variant
Chr19:55884589 Rr549922 637 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229210959
MGI SNP Detail
Alliance Variant
Chr19:55884656 Rr549922 704 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243459154
MGI SNP Detail
Alliance Variant
Chr19:55884668 Rr549922 716 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212789241
MGI SNP Detail
Alliance Variant
Chr19:55884687 Rr549922 735 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs231548761
MGI SNP Detail
Alliance Variant
Chr19:55884748 Rr549922 796 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582493649
MGI SNP Detail
Alliance Variant
Chr19:55884814 Rr549922 862 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585691608
MGI SNP Detail
Alliance Variant
Chr19:55884816 Rr549922 864 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262344212
MGI SNP Detail
Alliance Variant
Chr19:55884929 Rr549922 977 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215385110
MGI SNP Detail
Alliance Variant
Chr19:55884977 Rr549922 1025 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs240677878
MGI SNP Detail
Alliance Variant
Chr19:55884978 Rr549922 1026 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259958074
MGI SNP Detail
Alliance Variant
Chr19:55885060 Rr549922 1108 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs222341820
MGI SNP Detail
Alliance Variant
Chr19:55885078 Rr549922 1126 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230342440
MGI SNP Detail
Alliance Variant
Chr19:55885099 Rr549922 1147 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249277471
MGI SNP Detail
Alliance Variant
Chr19:55885101 Rr549922 1149 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219640871
MGI SNP Detail
Alliance Variant
Chr19:55885239 Rr549922 1287 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244440668
MGI SNP Detail
Alliance Variant
Chr19:55885244 Rr549922 1292 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs265557871
MGI SNP Detail
Alliance Variant
Chr19:55885430 Rr549922 1478 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs225160847
MGI SNP Detail
Alliance Variant
Chr19:55885462 Rr549922 1510 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs250331816
MGI SNP Detail
Alliance Variant
Chr19:55885572 Rr549922 1620 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261329058
MGI SNP Detail
Alliance Variant
Chr19:55885649 Rr549922 1697 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224282774
MGI SNP Detail
Alliance Variant
Chr19:55885675 Rr549922 1723 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243540453
MGI SNP Detail
Alliance Variant
Chr19:55885686 Rr549922 1734 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs256739290
MGI SNP Detail
Alliance Variant
Chr19:55885750 Rr549922 1798 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230089577
MGI SNP Detail
Alliance Variant
Chr19:55885813 Rr549922 1861 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251419034
MGI SNP Detail
Alliance Variant
Chr19:55885833 Rr549922 1881 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs215977811
MGI SNP Detail
Alliance Variant
Chr19:55885883 Rr549922 1931 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238463703
MGI SNP Detail
Alliance Variant
Chr19:55885891 Rr549922 1939 bp distal
Rr549923 within coordinates of
Tcf7l2 Intron
Tcf7l2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 47 of 47

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory