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Mouse SNP Summary
Symbol
Name
ID 		Rr550391
regulatory region 550391
MGI:8012523

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230939304
MGI SNP Detail
Alliance Variant		 Chr19:57629466 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1998 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249957777
MGI SNP Detail
Alliance Variant		 Chr19:57629470 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1994 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222919608
MGI SNP Detail
Alliance Variant		 Chr19:57629473 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1991 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237642910
MGI SNP Detail
Alliance Variant		 Chr19:57629497 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1967 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263192277
MGI SNP Detail
Alliance Variant		 Chr19:57629533 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1931 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36858971
MGI SNP Detail
Alliance Variant		 Chr19:57629597 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1867 bp proximal
 SNP A/G A A A A A A A G G G
rs52330806
MGI SNP Detail
Alliance Variant		 Chr19:57629668 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1796 bp proximal
 SNP A/G A A A A G A G G A G G A A A A A A A A G G G G G A G G A A A A G G A G A A A G G G A G A G G G G G A A G
rs52389076
MGI SNP Detail
Alliance Variant		 Chr19:57629719 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1745 bp proximal
 SNP A/T T T T T A T A A T A A T T T T T T T T A A A A A T A A T T T T A A T A T T T A A A T A T A A A T A T T A
rs52339257
MGI SNP Detail
Alliance Variant		 Chr19:57629724 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1740 bp proximal
 SNP A/G G G G G A G A A G A A G G G G G G G G A A A A A G A A G G G G A A G A G G G A A A G A G A A A A G G A
rs247310017
MGI SNP Detail
Alliance Variant		 Chr19:57629762 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1702 bp proximal
 SNP A/G A G
rs258207607
MGI SNP Detail
Alliance Variant		 Chr19:57629896 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1568 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231437447
MGI SNP Detail
Alliance Variant		 Chr19:57629918 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1546 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252394051
MGI SNP Detail
Alliance Variant		 Chr19:57629919 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1545 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265736532
MGI SNP Detail
Alliance Variant		 Chr19:57629974 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1490 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233155983
MGI SNP Detail
Alliance Variant		 Chr19:57630014 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1450 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs36264574
MGI SNP Detail
Alliance Variant		 Chr19:57630219 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1245 bp proximal
 SNP G/T G G T T G T G T G G G T G G T T G
rs212488518
MGI SNP Detail
Alliance Variant		 Chr19:57630230 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1234 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231034681
MGI SNP Detail
Alliance Variant		 Chr19:57630325 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1139 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36882641
MGI SNP Detail
Alliance Variant		 Chr19:57630334 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1130 bp proximal
 SNP C/T T T C T T C T T T C T T C C T
rs215072228
MGI SNP Detail
Alliance Variant		 Chr19:57630341 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1123 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36621370
MGI SNP Detail
Alliance Variant		 Chr19:57630380 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1084 bp proximal
 SNP G/T T T G T T G T T T G T T G T
rs213563988
MGI SNP Detail
Alliance Variant		 Chr19:57630389 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1075 bp proximal
 SNP C/T C T
rs225806138
MGI SNP Detail
Alliance Variant		 Chr19:57630411 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1053 bp proximal
 SNP C/G G G G G C G C G C C G G G G G G G G C C C C C G C G G G G C G G G G G C G C G C C C C G G
rs236087707
MGI SNP Detail
Alliance Variant		 Chr19:57630415 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1049 bp proximal
 SNP C/T C C C C T C T C T T C C C C C C C C T T T T T C T C C C C C C C C C T C C T T C T C C
rs249267546
MGI SNP Detail
Alliance Variant		 Chr19:57630416 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1048 bp proximal
 SNP A/G A A A A G A G A G G A A A A A A A A G G G G G A G A A A A A A A A A G A A G G G G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586303070
MGI SNP Detail
Alliance Variant		 Chr19:57630425 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1039 bp proximal
 SNP A/C C C C C A C A C A A C C C C C C C C A A A A C A C C C C C C C C C A C C A C A C C
rs578634344
MGI SNP Detail
Alliance Variant		 Chr19:57630431 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1033 bp proximal
 SNP A/C A A A A C A C A C C A A A A A A A A C C C C A C A A A A A A A A A C A A C C A C A A
rs582301188
MGI SNP Detail
Alliance Variant		 Chr19:57630434 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1030 bp proximal
 SNP C/T C C C C T C T C T C C C C C C C C T T T C T C C C C C C C C C T C C T T C T C C
rs218878688
MGI SNP Detail
Alliance Variant		 Chr19:57630445 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1019 bp proximal
 SNP A/G G G G G G A G A G G G G G G G G A G G G G G G G G G G A G G A G A G G
rs238831849
MGI SNP Detail
Alliance Variant		 Chr19:57630451 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1013 bp proximal
 SNP C/T T T T T T T C T T T T T T T T C T T T T T T T T T T C T T C T C T T
rs265252754
MGI SNP Detail
Alliance Variant		 Chr19:57630465 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 999 bp proximal
 SNP C/T T T T T T T T T T T T T T T C T T T T T T T T T T T T C C T T
rs585056883
MGI SNP Detail
Alliance Variant		 Chr19:57630470 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 994 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs579630717
MGI SNP Detail
Alliance Variant		 Chr19:57630475 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 989 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs224040240
MGI SNP Detail
Alliance Variant		 Chr19:57630640 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 824 bp proximal
 SNP C/G C C C C G C G G C G G G C C C C C C C C G G G G G C G G C C C C G C C C C C G G G C G C G G G G G C C G
rs239749200
MGI SNP Detail
Alliance Variant		 Chr19:57630641 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 823 bp proximal
 SNP A/G A G
rs263701101
MGI SNP Detail
Alliance Variant		 Chr19:57630663 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 801 bp proximal
 SNP C/T C C C C C C C C C C T C C C C C C C C T C C T T C C C C C C C C C C C C C C C C C C C C T C C C T C C C
rs37201507
MGI SNP Detail
Alliance Variant		 Chr19:57630679 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 785 bp proximal
 SNP C/T C C T T C C C C T C C T C
rs247554264
MGI SNP Detail
Alliance Variant		 Chr19:57630690 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 774 bp proximal
 SNP A/G A A A A G A G G A G G G A A A A A A A A G G G G G A G G A A A A G G A G A A A G G G A G A G G G G G A A G
rs30849922
MGI SNP Detail
Alliance Variant		 Chr19:57630702 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 762 bp proximal
 SNP G/T G T T G
rs224866900
MGI SNP Detail
Alliance Variant		 Chr19:57630731 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 733 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36463095
MGI SNP Detail
Alliance Variant		 Chr19:57630793 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 671 bp proximal
 SNP A/G G G G G G G G G G G A G G G
rs215509906
MGI SNP Detail
Alliance Variant		 Chr19:57630798 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 666 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231873041
MGI SNP Detail
Alliance Variant		 Chr19:57630804 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 660 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36340509
MGI SNP Detail
Alliance Variant		 Chr19:57630833 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 631 bp proximal
 SNP C/T C C T T C T C T C C C T C C T T C
rs217729995
MGI SNP Detail
Alliance Variant		 Chr19:57631071 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 393 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G G G G G G G G
rs216159536
MGI SNP Detail
Alliance Variant		 Chr19:57631146 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 318 bp proximal
 SNP C/T C T
rs232605962
MGI SNP Detail
Alliance Variant		 Chr19:57631156 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 308 bp proximal
 SNP C/T C T
rs212497005
MGI SNP Detail
Alliance Variant		 Chr19:57631160 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 304 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A
rs257806833
MGI SNP Detail
Alliance Variant		 Chr19:57631193 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 271 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580640571
MGI SNP Detail
Alliance Variant		 Chr19:57631198 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 266 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224071828
MGI SNP Detail
Alliance Variant		 Chr19:57631206 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 258 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246292274
MGI SNP Detail
Alliance Variant		 Chr19:57631248 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 216 bp proximal
 SNP A/G G G G G A G A A G A A G G G G G G G G A A G A A G A G G G G G A G G G G G G A G A G A G A A G G A G G A
rs263684699
MGI SNP Detail
Alliance Variant		 Chr19:57631270 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 194 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs222137486
MGI SNP Detail
Alliance Variant		 Chr19:57631275 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 189 bp proximal
 SNP A/G A A A A G A G G A G G G A A A A A A A A G G G G G A G G A A A A G G A A A A A G G G A G A G G G G G A A
rs251613383
MGI SNP Detail
Alliance Variant		 Chr19:57631291 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 173 bp proximal
 SNP A/G G A
rs213453291
MGI SNP Detail
Alliance Variant		 Chr19:57631297 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 167 bp proximal
 SNP C/T C T
rs253968792
MGI SNP Detail
Alliance Variant		 Chr19:57631314 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 150 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37435113
MGI SNP Detail
Alliance Variant		 Chr19:57631324 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 140 bp proximal
 SNP A/T A A T T A T A T A A A T A A T T A
rs246414590
MGI SNP Detail
Alliance Variant		 Chr19:57631354 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 110 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30507014
MGI SNP Detail
Alliance Variant		 Chr19:57631355 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 109 bp proximal
 SNP C/G C G C G
rs36663192
MGI SNP Detail
Alliance Variant		 Chr19:57631502 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs232557752
MGI SNP Detail
Alliance Variant		 Chr19:57631566 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr406050 within coordinates of
Rr550391 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253466273
MGI SNP Detail
Alliance Variant		 Chr19:57631619 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr406050 within coordinates of
Rr550391 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37274560
MGI SNP Detail
Alliance Variant		 Chr19:57631760 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr406050 within coordinates of
Rr550391 within coordinates of
 SNP C/T T T T C C T C T C T T T C T T C C T
rs49347024
MGI SNP Detail
Alliance Variant		 Chr19:57631834 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 43 bp distal
 SNP C/T T T C T C
rs46180628
MGI SNP Detail
Alliance Variant		 Chr19:57631857 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 66 bp distal
 SNP C/G C C G C G
rs30760664
MGI SNP Detail
Alliance Variant		 Chr19:57631861 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 70 bp distal
 SNP C/T T T T T C T C
rs231235789
MGI SNP Detail
Alliance Variant		 Chr19:57631930 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 139 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36570253
MGI SNP Detail
Alliance Variant		 Chr19:57631997 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 206 bp distal
 SNP C/T T T C C T C T C T T T C T T C C T
rs215745629
MGI SNP Detail
Alliance Variant		 Chr19:57632013 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 222 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37975699
MGI SNP Detail
Alliance Variant		 Chr19:57632025 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 234 bp distal
Rr550393 within coordinates of
 SNP C/T C C C T C T C T C C C T C C T T C
rs583727209
MGI SNP Detail
Alliance Variant		 Chr19:57632048 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 257 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587302604
MGI SNP Detail
Alliance Variant		 Chr19:57632049 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 258 bp distal
 SNP A/C C C C C A C A A C A A A C C C C C C C C A A C A A C A C C C C C A C C C C C C A C A C A C A A C C A C C A
rs30910541
MGI SNP Detail
Alliance Variant		 Chr19:57632079 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 288 bp distal
 SNP C/G G G G C C G C G G C G G G C G G C C G
rs222511184
MGI SNP Detail
Alliance Variant		 Chr19:57632082 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 291 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30615005
MGI SNP Detail
Alliance Variant		 Chr19:57632139 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 348 bp distal
 SNP A/G A A A A G A G
rs30413536
MGI SNP Detail
Alliance Variant		 Chr19:57632159 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 368 bp distal
 SNP C/T T T T T C T C
rs218797411
MGI SNP Detail
Alliance Variant		 Chr19:57632193 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 402 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234421832
MGI SNP Detail
Alliance Variant		 Chr19:57632241 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 450 bp distal
 SNP C/T C T
rs243267829
MGI SNP Detail
Alliance Variant		 Chr19:57632263 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 472 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51158568
MGI SNP Detail
Alliance Variant		 Chr19:57632415 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 624 bp distal
 SNP C/T C C T C T
rs232035255
MGI SNP Detail
Alliance Variant		 Chr19:57632487 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 696 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46723635
MGI SNP Detail
Alliance Variant		 Chr19:57632614 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 823 bp distal
 SNP C/T C C T C T
rs51839847
MGI SNP Detail
Alliance Variant		 Chr19:57632624 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 833 bp distal
 SNP C/T T C T C
rs229442252
MGI SNP Detail
Alliance Variant		 Chr19:57632743 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 952 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579761194
MGI SNP Detail
Alliance Variant		 Chr19:57632793 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1002 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583413215
MGI SNP Detail
Alliance Variant		 Chr19:57632795 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1004 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243335679
MGI SNP Detail
Alliance Variant		 Chr19:57632825 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1034 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs38474315
MGI SNP Detail
Alliance Variant		 Chr19:57632854 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1063 bp distal
 SNP C/G G G C C G C G C G G G C G G C C G
rs229921285
MGI SNP Detail
Alliance Variant		 Chr19:57632917 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1126 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251230993
MGI SNP Detail
Alliance Variant		 Chr19:57632943 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1152 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215768654
MGI SNP Detail
Alliance Variant		 Chr19:57632972 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1181 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238665258
MGI SNP Detail
Alliance Variant		 Chr19:57632987 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1196 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259186366
MGI SNP Detail
Alliance Variant		 Chr19:57633033 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1242 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217246601
MGI SNP Detail
Alliance Variant		 Chr19:57633038 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1247 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229905166
MGI SNP Detail
Alliance Variant		 Chr19:57633043 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1252 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248775645
MGI SNP Detail
Alliance Variant		 Chr19:57633045 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1254 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586170270
MGI SNP Detail
Alliance Variant		 Chr19:57633048 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1257 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213324609
MGI SNP Detail
Alliance Variant		 Chr19:57633111 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1320 bp distal
 SNP C/T C T
rs218853821
MGI SNP Detail
Alliance Variant		 Chr19:57633125 Atrnl1 Intron
Atrnl1 Noncoding-Transcript-Variant
Gm59237 within coordinates of
Rr550391 1334 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 134
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory