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Mouse SNP Summary
Symbol
Name
ID
Rr550470
regulatory region 550470
MGI:8012602

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37558249
MGI SNP Detail
Alliance Variant
Chr19:58258308 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1990 bp proximal
SNP G/T T T T G T G T T T T T T G T T T
rs38345065
MGI SNP Detail
Alliance Variant
Chr19:58258321 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1977 bp proximal
SNP A/G A A A A G A A A A A A A A A A
rs221251897
MGI SNP Detail
Alliance Variant
Chr19:58258347 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1951 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245716851
MGI SNP Detail
Alliance Variant
Chr19:58258473 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1825 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221868155
MGI SNP Detail
Alliance Variant
Chr19:58258606 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1692 bp proximal
SNP A/G A G
rs250374338
MGI SNP Detail
Alliance Variant
Chr19:58258618 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1680 bp proximal
SNP A/G G A
rs245589715
MGI SNP Detail
Alliance Variant
Chr19:58258675 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1623 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs258529604
MGI SNP Detail
Alliance Variant
Chr19:58258724 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1574 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs47584633
MGI SNP Detail
Alliance Variant
Chr19:58258737 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1561 bp proximal
SNP G G G G
rs254814081
MGI SNP Detail
Alliance Variant
Chr19:58258746 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1552 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs212342431
MGI SNP Detail
Alliance Variant
Chr19:58258758 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1540 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs585271871
MGI SNP Detail
Alliance Variant
Chr19:58258789 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1509 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31139916
MGI SNP Detail
Alliance Variant
Chr19:58258809 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1489 bp proximal
SNP C/T C C T C T C
rs221013607
MGI SNP Detail
Alliance Variant
Chr19:58258819 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1479 bp proximal
SNP A/G G A
rs214243177
MGI SNP Detail
Alliance Variant
Chr19:58258826 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1472 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233807044
MGI SNP Detail
Alliance Variant
Chr19:58258969 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1329 bp proximal
SNP A/G A A A G G A A G A A G G G G G G G A A G G A A A G G A G G A A G G A A A A A G G G A G A A G A A A G
rs39647906
MGI SNP Detail
Alliance Variant
Chr19:58258982 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1316 bp proximal
SNP A/C A A A A A A A A C A C A A
rs222696816
MGI SNP Detail
Alliance Variant
Chr19:58258990 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1308 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255835580
MGI SNP Detail
Alliance Variant
Chr19:58258994 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1304 bp proximal
SNP A/G A G
rs242828672
MGI SNP Detail
Alliance Variant
Chr19:58259143 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1155 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251222576
MGI SNP Detail
Alliance Variant
Chr19:58259148 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1150 bp proximal
SNP A/G A G
rs52432794
MGI SNP Detail
Alliance Variant
Chr19:58259153 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1145 bp proximal
SNP A/C A C
rs228515109
MGI SNP Detail
Alliance Variant
Chr19:58259158 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1140 bp proximal
SNP C/T C T
rs258488484
MGI SNP Detail
Alliance Variant
Chr19:58259167 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1131 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs36282354
MGI SNP Detail
Alliance Variant
Chr19:58259237 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 1061 bp proximal
SNP A/G G G A G A G G G G G G G G G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36568630
MGI SNP Detail
Alliance Variant
Chr19:58259361 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 937 bp proximal
SNP A/T T T T T T T T T T A T A T T T T
rs578861331
MGI SNP Detail
Alliance Variant
Chr19:58259473 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 825 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233793084
MGI SNP Detail
Alliance Variant
Chr19:58259494 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 804 bp proximal
SNP C/T C T
rs247112368
MGI SNP Detail
Alliance Variant
Chr19:58259509 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 789 bp proximal
SNP C/T C T
rs30662535
MGI SNP Detail
Alliance Variant
Chr19:58259544 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 754 bp proximal
SNP G/T G G G T G T G T G G G G T T G T G
rs245146903
MGI SNP Detail
Alliance Variant
Chr19:58259563 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 735 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214595416
MGI SNP Detail
Alliance Variant
Chr19:58259568 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 730 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233757441
MGI SNP Detail
Alliance Variant
Chr19:58259604 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 694 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247176712
MGI SNP Detail
Alliance Variant
Chr19:58259612 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 686 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs217979394
MGI SNP Detail
Alliance Variant
Chr19:58259613 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 685 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs37166958
MGI SNP Detail
Alliance Variant
Chr19:58259620 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 678 bp proximal
SNP C/T T T C T C T T T T T T T T C T
rs238964741
MGI SNP Detail
Alliance Variant
Chr19:58259678 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 620 bp proximal
SNP A/G A G
rs30423028
MGI SNP Detail
Alliance Variant
Chr19:58259687 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 611 bp proximal
SNP A/G G G G A G
rs39019923
MGI SNP Detail
Alliance Variant
Chr19:58259741 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 557 bp proximal
SNP A/G G G G G G G G G G G G A G A G G G
rs48465928
MGI SNP Detail
Alliance Variant
Chr19:58259811 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 487 bp proximal
SNP A A A A
rs36764580
MGI SNP Detail
Alliance Variant
Chr19:58259812 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 486 bp proximal
SNP A/C A A A C A C A A A A A C C A C A
rs37255228
MGI SNP Detail
Alliance Variant
Chr19:58259841 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 457 bp proximal
SNP A/C A A A C A C A A A A A C C A C A
rs36468379
MGI SNP Detail
Alliance Variant
Chr19:58259916 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 382 bp proximal
SNP C/T C C C C C C C C C C C T T T C T C C
rs226542511
MGI SNP Detail
Alliance Variant
Chr19:58259930 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 368 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50341822
MGI SNP Detail
Alliance Variant
Chr19:58259984 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 314 bp proximal
SNP C/T C C C T
rs264759852
MGI SNP Detail
Alliance Variant
Chr19:58259987 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 311 bp proximal
SNP C/T C C C C C T C C C C C C T T T T T T T C C C T C C C C T C T T C C T T C C C C C T T T C T C C C T C C C C
rs228829930
MGI SNP Detail
Alliance Variant
Chr19:58259990 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 308 bp proximal
SNP G/T G G G G G T G G G G G G T T T T T T T G G G G G G G G G G T T G G G T G G G G G G T T G T G G G G G G G G
rs239022239
MGI SNP Detail
Alliance Variant
Chr19:58259991 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 307 bp proximal
SNP A/G G G G G G A G G G G G G A A A A A A A G G G A G G G G A G A A G G A A G G G G G A A A G A G G G A G G G G
rs258497137
MGI SNP Detail
Alliance Variant
Chr19:58259996 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 302 bp proximal
SNP C/T C C C C T C C C T C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C T
rs46887197
MGI SNP Detail
Alliance Variant
Chr19:58260073 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 225 bp proximal
SNP T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253348421
MGI SNP Detail
Alliance Variant
Chr19:58260107 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 191 bp proximal
SNP C/T C T
rs581285527
MGI SNP Detail
Alliance Variant
Chr19:58260155 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 143 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47684522
MGI SNP Detail
Alliance Variant
Chr19:58260181 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 117 bp proximal
SNP A/G G G A G
rs37926925
MGI SNP Detail
Alliance Variant
Chr19:58260223 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 75 bp proximal
SNP A/G G G G G G G G G G G G A G A G G G G
rs38697481
MGI SNP Detail
Alliance Variant
Chr19:58260257 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 41 bp proximal
SNP G/T G G G G G G G G G G G T G T G G G G
rs213290195
MGI SNP Detail
Alliance Variant
Chr19:58260258 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 40 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231121212
MGI SNP Detail
Alliance Variant
Chr19:58260279 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 19 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37292550
MGI SNP Detail
Alliance Variant
Chr19:58260304 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/T T T T T T T T T T T T C C C T C T T
rs48434080
MGI SNP Detail
Alliance Variant
Chr19:58260319 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C C C C
rs36720394
MGI SNP Detail
Alliance Variant
Chr19:58260330 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/T C C C C C C C C C C C T C T C C C
rs50523509
MGI SNP Detail
Alliance Variant
Chr19:58260399 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/G G G C G
rs38060613
MGI SNP Detail
Alliance Variant
Chr19:58260441 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP A/G G G G G G G G G G G G A G A G G G G
rs251775428
MGI SNP Detail
Alliance Variant
Chr19:58260451 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255854211
MGI SNP Detail
Alliance Variant
Chr19:58260487 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221607423
MGI SNP Detail
Alliance Variant
Chr19:58260502 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36513044
MGI SNP Detail
Alliance Variant
Chr19:58260538 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 within coordinates of
SNP C/T C C C C C C C C C C C T C T C C C C
rs258362296
MGI SNP Detail
Alliance Variant
Chr19:58260552 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 10 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36798349
MGI SNP Detail
Alliance Variant
Chr19:58260583 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 41 bp distal
SNP C/T T T T T T T T T T T T C T C T T T T
rs241396485
MGI SNP Detail
Alliance Variant
Chr19:58260645 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 103 bp distal
SNP A/T A A A A T A A A A A A A A A A A A A A A T T A A A T T A A A A T A A A A A A T A A A A A A T T A A A
rs265977713
MGI SNP Detail
Alliance Variant
Chr19:58260647 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 105 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs46069382
MGI SNP Detail
Alliance Variant
Chr19:58260648 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 106 bp distal
SNP A A A A
rs252433748
MGI SNP Detail
Alliance Variant
Chr19:58260649 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 107 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs212710194
MGI SNP Detail
Alliance Variant
Chr19:58260675 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 133 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225209690
MGI SNP Detail
Alliance Variant
Chr19:58260688 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 146 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244561779
MGI SNP Detail
Alliance Variant
Chr19:58260746 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 204 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37981125
MGI SNP Detail
Alliance Variant
Chr19:58260750 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 208 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs233314775
MGI SNP Detail
Alliance Variant
Chr19:58260776 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 234 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs46430583
MGI SNP Detail
Alliance Variant
Chr19:58260889 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 347 bp distal
SNP G G G G
rs51022538
MGI SNP Detail
Alliance Variant
Chr19:58260892 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 350 bp distal
SNP C C C C
rs48627568
MGI SNP Detail
Alliance Variant
Chr19:58260900 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 358 bp distal
SNP C C C C
rs50735102
MGI SNP Detail
Alliance Variant
Chr19:58260928 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 386 bp distal
SNP C C C C
rs37051779
MGI SNP Detail
Alliance Variant
Chr19:58260929 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 387 bp distal
SNP C/G G G C G C G C C C
rs232227658
MGI SNP Detail
Alliance Variant
Chr19:58260956 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 414 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46134984
MGI SNP Detail
Alliance Variant
Chr19:58260970 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 428 bp distal
SNP T T T
rs37278397
MGI SNP Detail
Alliance Variant
Chr19:58260978 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 436 bp distal
SNP A/G G G A G A G G G G G A A G A G
rs249255825
MGI SNP Detail
Alliance Variant
Chr19:58260982 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 440 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264103543
MGI SNP Detail
Alliance Variant
Chr19:58261005 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 463 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52059374
MGI SNP Detail
Alliance Variant
Chr19:58261029 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 487 bp distal
SNP G G G
rs36597589
MGI SNP Detail
Alliance Variant
Chr19:58261053 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 511 bp distal
SNP C/T C C C T C C C C C C C C
rs37687959
MGI SNP Detail
Alliance Variant
Chr19:58261064 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 522 bp distal
SNP C/G C C G C G C C C C C G G C G C
rs49799257
MGI SNP Detail
Alliance Variant
Chr19:58261103 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 561 bp distal
SNP C C C
rs244530917
MGI SNP Detail
Alliance Variant
Chr19:58261105 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 563 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48052752
MGI SNP Detail
Alliance Variant
Chr19:58261108 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 566 bp distal
SNP C C C
rs49943118
MGI SNP Detail
Alliance Variant
Chr19:58261114 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 572 bp distal
SNP A A A
rs258887793
MGI SNP Detail
Alliance Variant
Chr19:58261137 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 595 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49903546
MGI SNP Detail
Alliance Variant
Chr19:58261161 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 619 bp distal
SNP T T T
rs235933034
MGI SNP Detail
Alliance Variant
Chr19:58261175 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 633 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs47623281
MGI SNP Detail
Alliance Variant
Chr19:58261181 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 639 bp distal
SNP C C C
rs36482431
MGI SNP Detail
Alliance Variant
Chr19:58261210 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 668 bp distal
SNP C/T C C T C T C C C C C C C C C C T C
rs36980422
MGI SNP Detail
Alliance Variant
Chr19:58261214 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550470 672 bp distal
SNP A/C C C C C C C C C C A A C A C
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Showing SNP(s) 1 - 100 of 128

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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