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Mouse SNP Summary
Symbol
Name
ID
Rr550471
regulatory region 550471
MGI:8012603

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265074875
MGI SNP Detail
Alliance Variant
Chr19:58282480 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1987 bp proximal
SNP C/T C T
rs230856962
MGI SNP Detail
Alliance Variant
Chr19:58282485 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1982 bp proximal
SNP A/G A G
rs252475590
MGI SNP Detail
Alliance Variant
Chr19:58282489 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1978 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221509126
MGI SNP Detail
Alliance Variant
Chr19:58282490 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1977 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241779825
MGI SNP Detail
Alliance Variant
Chr19:58282493 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1974 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264112385
MGI SNP Detail
Alliance Variant
Chr19:58282502 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1965 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G
rs227032227
MGI SNP Detail
Alliance Variant
Chr19:58282518 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1949 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244304821
MGI SNP Detail
Alliance Variant
Chr19:58282559 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1908 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs262094185
MGI SNP Detail
Alliance Variant
Chr19:58282585 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1882 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225675377
MGI SNP Detail
Alliance Variant
Chr19:58282597 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1870 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238790426
MGI SNP Detail
Alliance Variant
Chr19:58282659 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1808 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257297879
MGI SNP Detail
Alliance Variant
Chr19:58282678 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1789 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227680781
MGI SNP Detail
Alliance Variant
Chr19:58282706 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1761 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37772465
MGI SNP Detail
Alliance Variant
Chr19:58282752 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1715 bp proximal
SNP A/G G G G G G G G G G A A G G A G A
rs266175189
MGI SNP Detail
Alliance Variant
Chr19:58282806 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1661 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212954113
MGI SNP Detail
Alliance Variant
Chr19:58282821 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1646 bp proximal
SNP C/T C T
rs38794485
MGI SNP Detail
Alliance Variant
Chr19:58282886 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1581 bp proximal
SNP A/G G G G G G G G G G A G G A G
rs213640559
MGI SNP Detail
Alliance Variant
Chr19:58282902 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1565 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234343372
MGI SNP Detail
Alliance Variant
Chr19:58282929 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1538 bp proximal
SNP A/G G A
rs39160281
MGI SNP Detail
Alliance Variant
Chr19:58282960 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm46650 mRNA-UTR
Rr550471 1507 bp proximal
SNP C/G G G G G G G G G G C C G G C G C
rs215599199
MGI SNP Detail
Alliance Variant
Chr19:58283094 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1373 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs235306390
MGI SNP Detail
Alliance Variant
Chr19:58283104 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1363 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260637657
MGI SNP Detail
Alliance Variant
Chr19:58283120 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1347 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215330477
MGI SNP Detail
Alliance Variant
Chr19:58283134 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1333 bp proximal
SNP C/T C T
rs235290680
MGI SNP Detail
Alliance Variant
Chr19:58283185 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1282 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241461006
MGI SNP Detail
Alliance Variant
Chr19:58283204 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1263 bp proximal
SNP A/T A T
rs257334442
MGI SNP Detail
Alliance Variant
Chr19:58283220 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1247 bp proximal
SNP A/G G A
rs238753615
MGI SNP Detail
Alliance Variant
Chr19:58283234 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1233 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586429936
MGI SNP Detail
Alliance Variant
Chr19:58283245 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1222 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs580624357
MGI SNP Detail
Alliance Variant
Chr19:58283252 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1215 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs257696697
MGI SNP Detail
Alliance Variant
Chr19:58283255 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1212 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs583416036
MGI SNP Detail
Alliance Variant
Chr19:58283258 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1209 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs221689583
MGI SNP Detail
Alliance Variant
Chr19:58283320 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1147 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs250208282
MGI SNP Detail
Alliance Variant
Chr19:58283321 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1146 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586169589
MGI SNP Detail
Alliance Variant
Chr19:58283376 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1091 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A
rs579781322
MGI SNP Detail
Alliance Variant
Chr19:58283380 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1087 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A
rs583398744
MGI SNP Detail
Alliance Variant
Chr19:58283381 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1086 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586613385
MGI SNP Detail
Alliance Variant
Chr19:58283384 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1083 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A
rs580824388
MGI SNP Detail
Alliance Variant
Chr19:58283388 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1079 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583948563
MGI SNP Detail
Alliance Variant
Chr19:58283389 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1078 bp proximal
SNP C/T C C C C C C C C C C T C C C C C C C C T C C C C C C C C
rs587531823
MGI SNP Detail
Alliance Variant
Chr19:58283392 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1075 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs581691158
MGI SNP Detail
Alliance Variant
Chr19:58283397 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1070 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584597479
MGI SNP Detail
Alliance Variant
Chr19:58283400 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1067 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579137349
MGI SNP Detail
Alliance Variant
Chr19:58283401 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1066 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs580825945
MGI SNP Detail
Alliance Variant
Chr19:58283404 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1063 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584553116
MGI SNP Detail
Alliance Variant
Chr19:58283406 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1061 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578328161
MGI SNP Detail
Alliance Variant
Chr19:58283423 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1044 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs264469455
MGI SNP Detail
Alliance Variant
Chr19:58283437 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1030 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs223649140
MGI SNP Detail
Alliance Variant
Chr19:58283443 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1024 bp proximal
SNP A/G A G
rs250098567
MGI SNP Detail
Alliance Variant
Chr19:58283450 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1017 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257406444
MGI SNP Detail
Alliance Variant
Chr19:58283454 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1013 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226478139
MGI SNP Detail
Alliance Variant
Chr19:58283507 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 960 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs246438048
MGI SNP Detail
Alliance Variant
Chr19:58283508 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 959 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs215839437
MGI SNP Detail
Alliance Variant
Chr19:58283516 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 951 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs582044747
MGI SNP Detail
Alliance Variant
Chr19:58283517 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 950 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584421045
MGI SNP Detail
Alliance Variant
Chr19:58283577 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 890 bp proximal
SNP A/T T T T T A T T T A T T T T T T T T T T A T A A T T T A A T A A T T A T T T A T T A T T T T T T A A T T A A
rs235522908
MGI SNP Detail
Alliance Variant
Chr19:58283594 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 873 bp proximal
SNP C/T C C C C T C C C T C C C C C C C C C C T C T T C C C T T C T T C C T C C C T C C T C C C C C C T T C C T T
rs259743746
MGI SNP Detail
Alliance Variant
Chr19:58283598 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 869 bp proximal
SNP A/T A A A A T A A A T A A A A A A A A A A T A T T A A A T T A T T A A T A A A T A A T A A A A A A T T A A T T
rs235038747
MGI SNP Detail
Alliance Variant
Chr19:58283603 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 864 bp proximal
SNP C/T T C
rs250789291
MGI SNP Detail
Alliance Variant
Chr19:58283639 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 828 bp proximal
SNP A/G G A
rs256903785
MGI SNP Detail
Alliance Variant
Chr19:58283649 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 818 bp proximal
SNP C/T T T T T C T T T C T T T T T T T T T T C T C C T T T C C T C C T T C T T T C T T C T T T T T T C C T T C C
rs219603481
MGI SNP Detail
Alliance Variant
Chr19:58283650 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 817 bp proximal
SNP C/G G G G G C G G G C G G G G G G G G G G C G C C G G G C C G C C G G C G G G C G G C G G G G G G C C G G C C
rs232333059
MGI SNP Detail
Alliance Variant
Chr19:58283653 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 814 bp proximal
SNP C/T C C C C T C C C T C C C C C C C C C C T C T C C C C T C C T T C C C C C C T C C C C C C C C C T C C C T T
rs251490493
MGI SNP Detail
Alliance Variant
Chr19:58283654 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 813 bp proximal
SNP C/G G G G G C G G G C G G G G G G G G G G C G C C G G G C C G C C G G C G G G C G G C G G G G G G C C G G C C
rs218580461
MGI SNP Detail
Alliance Variant
Chr19:58283667 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 800 bp proximal
SNP C/T C T
rs38198325
MGI SNP Detail
Alliance Variant
Chr19:58283683 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 784 bp proximal
SNP A/G A A A A A A A G A A G G
rs261108546
MGI SNP Detail
Alliance Variant
Chr19:58283710 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 757 bp proximal
SNP A A A
rs223975878
MGI SNP Detail
Alliance Variant
Chr19:58283717 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 750 bp proximal
SNP G G G
rs245216448
MGI SNP Detail
Alliance Variant
Chr19:58283762 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 705 bp proximal
SNP C/G G G G G C G G G C G G G G G G G G G G C G C C G G G C C G C C G G C G G G C G G C G G G G G G C G G G C C
rs579277734
MGI SNP Detail
Alliance Variant
Chr19:58283764 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 703 bp proximal
SNP A/T A A A A T A A A T A A A A A A A A A A A A T A A A A T A A T A A A A A A A A A A A A A A A A A T A A A A T
rs257758046
MGI SNP Detail
Alliance Variant
Chr19:58283773 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 694 bp proximal
SNP C/T C C C C T C C C T C C C C C C C C C C T C T C C C T C T C C C C C C C T C C C C C C T C C C T
rs248821710
MGI SNP Detail
Alliance Variant
Chr19:58283774 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 693 bp proximal
SNP A/G G A
rs262304216
MGI SNP Detail
Alliance Variant
Chr19:58283775 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 692 bp proximal
SNP A/C C A
rs37764157
MGI SNP Detail
Alliance Variant
Chr19:58283832 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 635 bp proximal
SNP C/T C C T C T C C C C T T C C T T T
rs37040087
MGI SNP Detail
Alliance Variant
Chr19:58283862 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 605 bp proximal
SNP C/T T T C T C T T T T C C T T C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254722728
MGI SNP Detail
Alliance Variant
Chr19:58283966 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 501 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs254559642
MGI SNP Detail
Alliance Variant
Chr19:58284014 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 453 bp proximal
SNP A/C C A
rs582896865
MGI SNP Detail
Alliance Variant
Chr19:58284037 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 430 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211754074
MGI SNP Detail
Alliance Variant
Chr19:58284100 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 367 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228376148
MGI SNP Detail
Alliance Variant
Chr19:58284223 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 244 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs243521588
MGI SNP Detail
Alliance Variant
Chr19:58284231 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 236 bp proximal
SNP C/T C C C C T C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214145898
MGI SNP Detail
Alliance Variant
Chr19:58284239 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 228 bp proximal
SNP A/G A A A A G A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228558707
MGI SNP Detail
Alliance Variant
Chr19:58284263 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 204 bp proximal
SNP C/G C G
rs251454987
MGI SNP Detail
Alliance Variant
Chr19:58284358 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 109 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247480917
MGI SNP Detail
Alliance Variant
Chr19:58284420 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 47 bp proximal
SNP C/T T C
rs242521159
MGI SNP Detail
Alliance Variant
Chr19:58284432 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 35 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215388858
MGI SNP Detail
Alliance Variant
Chr19:58284443 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 24 bp proximal
SNP C/T T C
rs36287061
MGI SNP Detail
Alliance Variant
Chr19:58284444 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 23 bp proximal
SNP G/T T T T T T T T T T G T T T G T G
rs38374454
MGI SNP Detail
Alliance Variant
Chr19:58284456 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 11 bp proximal
SNP C/T C C C C C C C C C T C C C C
rs37775462
MGI SNP Detail
Alliance Variant
Chr19:58284457 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 10 bp proximal
SNP A/G G G G G G G G G G G G G A G
rs255663442
MGI SNP Detail
Alliance Variant
Chr19:58284466 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 1 bp proximal
SNP A/G A G
rs37172338
MGI SNP Detail
Alliance Variant
Chr19:58284479 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP A/T T T T T T T T T T A T T T A T A
rs236538964
MGI SNP Detail
Alliance Variant
Chr19:58284481 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP C/T T C
rs240719025
MGI SNP Detail
Alliance Variant
Chr19:58284499 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36433256
MGI SNP Detail
Alliance Variant
Chr19:58284567 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP C/G C C G C G C C C C C C C C C G C
rs233040376
MGI SNP Detail
Alliance Variant
Chr19:58284596 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251263085
MGI SNP Detail
Alliance Variant
Chr19:58284635 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Rr550471 within coordinates of
SNP C/T T T T T C T T T C T T T T T T T T T T T T C T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T C
rs261449238
MGI SNP Detail
Alliance Variant
Chr19:58284652 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm10007 within coordinates of
Rr550471 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229217775
MGI SNP Detail
Alliance Variant
Chr19:58284692 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm10007 within coordinates of
Rr550471 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs36659839
MGI SNP Detail
Alliance Variant
Chr19:58284696 Gfra1 Intron
Gfra1 Noncoding-Transcript-Variant
Gm10007 within coordinates of
Rr550471 within coordinates of
SNP C/T C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 174

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory