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Mouse SNP Summary
Symbol
Name
ID
Rr550529
regulatory region 550529
MGI:8012661

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254996465
MGI SNP Detail
Alliance Variant
Chr19:58808559 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1962 bp proximal
SNP C/T T C
rs30554384
MGI SNP Detail
Alliance Variant
Chr19:58808570 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1951 bp proximal
SNP C/T C C C C C C C T C C C C C T C C C C
rs221526485
MGI SNP Detail
Alliance Variant
Chr19:58808571 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1950 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs250012595
MGI SNP Detail
Alliance Variant
Chr19:58808580 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1941 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260772664
MGI SNP Detail
Alliance Variant
Chr19:58808592 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1929 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220125812
MGI SNP Detail
Alliance Variant
Chr19:58808608 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1913 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37468835
MGI SNP Detail
Alliance Variant
Chr19:58808619 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1902 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs257275402
MGI SNP Detail
Alliance Variant
Chr19:58808637 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1884 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226255905
MGI SNP Detail
Alliance Variant
Chr19:58808680 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1841 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240159969
MGI SNP Detail
Alliance Variant
Chr19:58808755 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1766 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs36694667
MGI SNP Detail
Alliance Variant
Chr19:58808760 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1761 bp proximal
SNP A/C A A A A A A A A A A C A A C A
rs232882354
MGI SNP Detail
Alliance Variant
Chr19:58808769 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1752 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37164625
MGI SNP Detail
Alliance Variant
Chr19:58808799 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a mRNA-UTR
Rr550529 1722 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs583566752
MGI SNP Detail
Alliance Variant
Chr19:58808906 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1615 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G A G A G G G G A G G G G G G G G G G G G
rs586611835
MGI SNP Detail
Alliance Variant
Chr19:58808978 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1543 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579657646
MGI SNP Detail
Alliance Variant
Chr19:58809001 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1520 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs583820395
MGI SNP Detail
Alliance Variant
Chr19:58809021 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1500 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs219588324
MGI SNP Detail
Alliance Variant
Chr19:58809063 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1458 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587145059
MGI SNP Detail
Alliance Variant
Chr19:58809087 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1434 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228784240
MGI SNP Detail
Alliance Variant
Chr19:58809157 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1364 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243423457
MGI SNP Detail
Alliance Variant
Chr19:58809168 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1353 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584991190
MGI SNP Detail
Alliance Variant
Chr19:58809204 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1317 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52547121
MGI SNP Detail
Alliance Variant
Chr19:58809230 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1291 bp proximal
SNP A/G G G A G
rs38767157
MGI SNP Detail
Alliance Variant
Chr19:58809278 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1243 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs45799962
MGI SNP Detail
Alliance Variant
Chr19:58809363 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1158 bp proximal
SNP C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216117393
MGI SNP Detail
Alliance Variant
Chr19:58809398 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 1123 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264169971
MGI SNP Detail
Alliance Variant
Chr19:58809425 Gm56672 within coordinates of
Hspa12a Intron
Hspa12a Splice-Site
Rr550529 1096 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37203523
MGI SNP Detail
Alliance Variant
Chr19:58809459 Gm56672 within coordinates of
Hspa12a Coding-NonSynonymous
Hspa12a Coding-Synonymous
Rr550529 1062 bp proximal
SNP C/T C C C C T C C C C C C C C C C
rs36313162
MGI SNP Detail
Alliance Variant
Chr19:58809489 Gm56672 within coordinates of
Hspa12a Coding-NonSynonymous
Hspa12a Coding-Synonymous
Rr550529 1032 bp proximal
SNP C/T T T T T C T T T T T C T T C T
rs31280830
MGI SNP Detail
Alliance Variant
Chr19:58809546 Gm56672 within coordinates of
Hspa12a Coding-Synonymous
Hspa12a mRNA-UTR
Hspa12a Splice-Site
Rr550529 975 bp proximal
SNP C/T C C C C C C C T C C C C C C T C C C C
rs251206207
MGI SNP Detail
Alliance Variant
Chr19:58809569 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 952 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs39453853
MGI SNP Detail
Alliance Variant
Chr19:58809574 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 947 bp proximal
SNP A/G A A A A G A A A A A G A A G A
rs584450081
MGI SNP Detail
Alliance Variant
Chr19:58809599 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 922 bp proximal
SNP C/T C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233835621
MGI SNP Detail
Alliance Variant
Chr19:58809621 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 900 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs39214565
MGI SNP Detail
Alliance Variant
Chr19:58809725 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 796 bp proximal
SNP C/G C C C C C C C C C C G C C G C
rs266228041
MGI SNP Detail
Alliance Variant
Chr19:58809764 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 757 bp proximal
SNP A/C A A A A A A A A C A A A A A A A A C A A A A C A A A A C A A A A A C A C A A A A C A A A A A A A A A A A A
rs228012640
MGI SNP Detail
Alliance Variant
Chr19:58809822 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 699 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243292439
MGI SNP Detail
Alliance Variant
Chr19:58809865 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 656 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A C A C A A A A C A A A A A A A A A A A A
rs255828834
MGI SNP Detail
Alliance Variant
Chr19:58809940 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 581 bp proximal
SNP G/T T T T T T T T T G T T T T T T T T G T T T T G T T T T G T T T T T G T G T T T T G T T T T T T T G T T T T
rs226424893
MGI SNP Detail
Alliance Variant
Chr19:58809945 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 576 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245370400
MGI SNP Detail
Alliance Variant
Chr19:58809966 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 555 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C A C A C C C C A C C C C C C C C C C C C
rs30353868
MGI SNP Detail
Alliance Variant
Chr19:58809969 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 552 bp proximal
SNP C/T C C T C T C
rs242357493
MGI SNP Detail
Alliance Variant
Chr19:58809977 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 544 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254877819
MGI SNP Detail
Alliance Variant
Chr19:58809993 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 528 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212417982
MGI SNP Detail
Alliance Variant
Chr19:58810015 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 506 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G A G A G G G G A G G G G G G G G G G G G
rs230499886
MGI SNP Detail
Alliance Variant
Chr19:58810025 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 496 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251085869
MGI SNP Detail
Alliance Variant
Chr19:58810048 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 473 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220279992
MGI SNP Detail
Alliance Variant
Chr19:58810101 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 420 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241965109
MGI SNP Detail
Alliance Variant
Chr19:58810120 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 401 bp proximal
SNP C/T T C
rs233864056
MGI SNP Detail
Alliance Variant
Chr19:58810167 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 354 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253346037
MGI SNP Detail
Alliance Variant
Chr19:58810187 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 334 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212615432
MGI SNP Detail
Alliance Variant
Chr19:58810225 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 296 bp proximal
SNP A/T T A
rs250713002
MGI SNP Detail
Alliance Variant
Chr19:58810232 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 289 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261332967
MGI SNP Detail
Alliance Variant
Chr19:58810275 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 246 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220754984
MGI SNP Detail
Alliance Variant
Chr19:58810293 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 228 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G T G T G G G G T G G G G G G G G G G G G
rs237002489
MGI SNP Detail
Alliance Variant
Chr19:58810308 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 213 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G A G A G G G G A G G G G G G G G G G G G
rs255690476
MGI SNP Detail
Alliance Variant
Chr19:58810313 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 208 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30981105
MGI SNP Detail
Alliance Variant
Chr19:58810323 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 198 bp proximal
SNP A/G G G A G G G
rs30668980
MGI SNP Detail
Alliance Variant
Chr19:58810350 Gm56672 within coordinates of
Hspa12a Intron
Rr550529 171 bp proximal
SNP C/T C C T C T C
rs37115235
MGI SNP Detail
Alliance Variant
Chr19:58810429 Hspa12a Intron
Rr550529 92 bp proximal
SNP C/T T T T C T T T T T C T T C T T
rs234800472
MGI SNP Detail
Alliance Variant
Chr19:58810469 Hspa12a Intron
Rr550529 52 bp proximal
SNP A/G A G
rs251199457
MGI SNP Detail
Alliance Variant
Chr19:58810483 Hspa12a Intron
Rr550529 38 bp proximal
SNP C/T T C
rs36246615
MGI SNP Detail
Alliance Variant
Chr19:58810484 Hspa12a Intron
Rr550529 37 bp proximal
SNP C/G C C C C C C C C G G C C G C C
rs36336770
MGI SNP Detail
Alliance Variant
Chr19:58810544 Hspa12a Coding-Synonymous
Hspa12a mRNA-UTR
Rr550529 within coordinates of
SNP A/G A A A A G A A A A A G G G A G A A
rs37290363
MGI SNP Detail
Alliance Variant
Chr19:58810606 Hspa12a Intron
Hspa12a Splice-Site
Rr550529 within coordinates of
SNP A/G G G G G A G G G G G G G G G G
rs31198467
MGI SNP Detail
Alliance Variant
Chr19:58810636 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G A G G G G A A A G A G G
rs36309144
MGI SNP Detail
Alliance Variant
Chr19:58810640 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T T T T C T T T T T
rs244909675
MGI SNP Detail
Alliance Variant
Chr19:58810644 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214266994
MGI SNP Detail
Alliance Variant
Chr19:58810657 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233943146
MGI SNP Detail
Alliance Variant
Chr19:58810715 Hspa12a Intron
Rr550529 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs52029321
MGI SNP Detail
Alliance Variant
Chr19:58810722 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T C C T C
rs578264740
MGI SNP Detail
Alliance Variant
Chr19:58810821 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C T C T C C C C T C C C C C C C C C C C C
rs239996671
MGI SNP Detail
Alliance Variant
Chr19:58810826 Hspa12a Intron
Rr550529 within coordinates of
SNP T T T T T T T T T T T T T
rs260600257
MGI SNP Detail
Alliance Variant
Chr19:58810867 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37588775
MGI SNP Detail
Alliance Variant
Chr19:58810873 Hspa12a Intron
Rr550529 within coordinates of
Tssr159982 within coordinates of
SNP A/T A A A A T A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38216236
MGI SNP Detail
Alliance Variant
Chr19:58810886 Hspa12a Intron
Rr550529 within coordinates of
Tssr159983 within coordinates of
SNP A/T T T T T A T T T T T A T T A T
rs36921858
MGI SNP Detail
Alliance Variant
Chr19:58810909 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G A G G G G G G G G G G
rs36930762
MGI SNP Detail
Alliance Variant
Chr19:58810970 Hspa12a Intron
Rr550529 within coordinates of
Tssr159985 within coordinates of
SNP A/T T T T T A T A T T T A T T A T
rs36312264
MGI SNP Detail
Alliance Variant
Chr19:58810994 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs30965667
MGI SNP Detail
Alliance Variant
Chr19:58811149 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G A A A G G G A G G
rs36551340
MGI SNP Detail
Alliance Variant
Chr19:58811183 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G A A A A A A G A A A A A A A A
rs227814839
MGI SNP Detail
Alliance Variant
Chr19:58811239 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T T C
rs263826324
MGI SNP Detail
Alliance Variant
Chr19:58811242 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48158057
MGI SNP Detail
Alliance Variant
Chr19:58811259 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G A G
rs248440673
MGI SNP Detail
Alliance Variant
Chr19:58811269 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264668110
MGI SNP Detail
Alliance Variant
Chr19:58811299 Hspa12a Intron
Rr550529 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256759642
MGI SNP Detail
Alliance Variant
Chr19:58811307 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G A G
rs37041642
MGI SNP Detail
Alliance Variant
Chr19:58811309 Hspa12a Intron
Rr550529 within coordinates of
SNP A/G G G G G G G G G G G G G G A G
rs245163567
MGI SNP Detail
Alliance Variant
Chr19:58811434 Hspa12a Intron
Rr550529 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214522265
MGI SNP Detail
Alliance Variant
Chr19:58811453 Hspa12a Intron
Rr550529 3 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227236602
MGI SNP Detail
Alliance Variant
Chr19:58811468 Hspa12a Intron
Rr550529 18 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30646751
MGI SNP Detail
Alliance Variant
Chr19:58811532 Hspa12a Intron
Rr550529 82 bp distal
SNP C/T T T C T C T
rs36631138
MGI SNP Detail
Alliance Variant
Chr19:58811576 Hspa12a Intron
Rr550529 126 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs37925205
MGI SNP Detail
Alliance Variant
Chr19:58811699 Hspa12a Intron
Rr550529 249 bp distal
SNP C/T T T T T T T T T T T C T C T T T T
rs255218877
MGI SNP Detail
Alliance Variant
Chr19:58811725 Hspa12a Intron
Rr550529 275 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212557262
MGI SNP Detail
Alliance Variant
Chr19:58811854 Hspa12a Intron
Rr550529 404 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231090045
MGI SNP Detail
Alliance Variant
Chr19:58811908 Hspa12a Intron
Rr550529 458 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250272572
MGI SNP Detail
Alliance Variant
Chr19:58811951 Hspa12a Intron
Rr550529 501 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49401956
MGI SNP Detail
Alliance Variant
Chr19:58811956 Hspa12a Intron
Rr550529 506 bp distal
SNP C/T C C T C
rs245676275
MGI SNP Detail
Alliance Variant
Chr19:58812041 Hspa12a Intron
Rr550529 591 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 100 of 150

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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