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Mouse SNP Summary
Symbol
Name
ID
Rr550672
regulatory region 550672
MGI:8012804

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30448187
MGI SNP Detail
Alliance Variant
Chr19:59891973 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1871 bp proximal
SNP A/G G G A A G A A G G A A G G
rs30856296
MGI SNP Detail
Alliance Variant
Chr19:59891974 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1870 bp proximal
SNP A/C A A C A A A
rs250217150
MGI SNP Detail
Alliance Variant
Chr19:59892009 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1835 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265149709
MGI SNP Detail
Alliance Variant
Chr19:59892034 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1810 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582469486
MGI SNP Detail
Alliance Variant
Chr19:59892072 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1772 bp proximal
SNP G/T G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30957600
MGI SNP Detail
Alliance Variant
Chr19:59892096 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1748 bp proximal
SNP A/T A A A T A T A A A A A T A T A A
rs257519530
MGI SNP Detail
Alliance Variant
Chr19:59892197 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1647 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216057132
MGI SNP Detail
Alliance Variant
Chr19:59892230 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1614 bp proximal
SNP A/G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs235636272
MGI SNP Detail
Alliance Variant
Chr19:59892256 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1588 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51102524
MGI SNP Detail
Alliance Variant
Chr19:59892568 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1276 bp proximal
SNP C/T C C C C T C C C C C C C C C T
rs47703840
MGI SNP Detail
Alliance Variant
Chr19:59892589 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1255 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs30375678
MGI SNP Detail
Alliance Variant
Chr19:59892633 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 1211 bp proximal
SNP C/T T T T C C T C T T T T T C T T C T T
rs237253695
MGI SNP Detail
Alliance Variant
Chr19:59892887 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 957 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257031528
MGI SNP Detail
Alliance Variant
Chr19:59892954 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 890 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48278905
MGI SNP Detail
Alliance Variant
Chr19:59892973 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 871 bp proximal
SNP A/G G G G G A G G G G G G G G G A
rs237738292
MGI SNP Detail
Alliance Variant
Chr19:59892978 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 866 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs13463850
MGI SNP Detail
Alliance Variant
Chr19:59893029 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 815 bp proximal
SNP C/T C C C T T C C T C C C C C T C C T C C
rs221815854
MGI SNP Detail
Alliance Variant
Chr19:59893079 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 765 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs13463851
MGI SNP Detail
Alliance Variant
Chr19:59893242 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 602 bp proximal
SNP C/T T C C C C C C C T T C T T C C
rs247876762
MGI SNP Detail
Alliance Variant
Chr19:59893402 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 442 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218351634
MGI SNP Detail
Alliance Variant
Chr19:59893417 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 427 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245483971
MGI SNP Detail
Alliance Variant
Chr19:59893424 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 420 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31237215
MGI SNP Detail
Alliance Variant
Chr19:59893791 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 53 bp proximal
SNP A/G G G G A A A G A G G G G G A G G A G A
rs231530846
MGI SNP Detail
Alliance Variant
Chr19:59893841 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 3 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583400843
MGI SNP Detail
Alliance Variant
Chr19:59893937 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3706287
MGI SNP Detail
Alliance Variant
Chr19:59894118 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G A A G G A A G A A A A A G A A G A A
rs260134906
MGI SNP Detail
Alliance Variant
Chr19:59894269 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228671757
MGI SNP Detail
Alliance Variant
Chr19:59894308 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49395493
MGI SNP Detail
Alliance Variant
Chr19:59894345 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP T T T T
rs586226522
MGI SNP Detail
Alliance Variant
Chr19:59894360 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212168130
MGI SNP Detail
Alliance Variant
Chr19:59894391 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228809348
MGI SNP Detail
Alliance Variant
Chr19:59894402 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255263651
MGI SNP Detail
Alliance Variant
Chr19:59894434 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46950253
MGI SNP Detail
Alliance Variant
Chr19:59894531 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G G G G G G G G G G G A G G G G
rs214711816
MGI SNP Detail
Alliance Variant
Chr19:59894580 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239877305
MGI SNP Detail
Alliance Variant
Chr19:59894630 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50040439
MGI SNP Detail
Alliance Variant
Chr19:59894669 Rab11fip2 Coding-NonSynonymous
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G G G G G G G G G G G G G G A G
rs48440025
MGI SNP Detail
Alliance Variant
Chr19:59894707 Rab11fip2 Coding-Synonymous
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/T T T C C T T T T T T T C T T C T T
rs234975956
MGI SNP Detail
Alliance Variant
Chr19:59894749 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30966482
MGI SNP Detail
Alliance Variant
Chr19:59894871 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/T C C T T C C T C C C C C T C C T C C
rs220715851
MGI SNP Detail
Alliance Variant
Chr19:59895193 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242723628
MGI SNP Detail
Alliance Variant
Chr19:59895209 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49999717
MGI SNP Detail
Alliance Variant
Chr19:59895235 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP A A A A A A
rs223811517
MGI SNP Detail
Alliance Variant
Chr19:59895278 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248339590
MGI SNP Detail
Alliance Variant
Chr19:59895322 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550672 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30895957
MGI SNP Detail
Alliance Variant
Chr19:59895375 Rab11fip2 Coding-Synonymous
Rr550672 28 bp distal
SNP C/T C C C T T C C T C C C C C C C C C C C
rs30856399
MGI SNP Detail
Alliance Variant
Chr19:59895483 Rab11fip2 Coding-Synonymous
Rr550672 136 bp distal
SNP C/T T T T C C C T C T T T T T C T T C T C
rs49552670
MGI SNP Detail
Alliance Variant
Chr19:59895551 Rab11fip2 Coding-NonSynonymous
Rr550672 204 bp distal
SNP C/T C C C C C C C C C C T C C C C
rs242950627
MGI SNP Detail
Alliance Variant
Chr19:59895633 Rab11fip2 Intron
Rr550672 286 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48723140
MGI SNP Detail
Alliance Variant
Chr19:59895757 Rab11fip2 Intron
Rr550672 410 bp distal
SNP A/C A A A C C A A A A A A A C A A C A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229365003
MGI SNP Detail
Alliance Variant
Chr19:59895800 Rab11fip2 Intron
Rr550672 453 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46180739
MGI SNP Detail
Alliance Variant
Chr19:59895823 Rab11fip2 Intron
Rr550672 476 bp distal
SNP A/G G G G A A A G G G G G G A G G A G A
rs583985396
MGI SNP Detail
Alliance Variant
Chr19:59895907 Rab11fip2 Intron
Rr550672 560 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs46887886
MGI SNP Detail
Alliance Variant
Chr19:59895913 Rab11fip2 Intron
Rr550672 566 bp distal
SNP A A A A A A
rs215168380
MGI SNP Detail
Alliance Variant
Chr19:59895919 Rab11fip2 Intron
Rr550672 572 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231629403
MGI SNP Detail
Alliance Variant
Chr19:59896034 Rab11fip2 Intron
Rr550672 687 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245931496
MGI SNP Detail
Alliance Variant
Chr19:59896064 Rab11fip2 Intron
Rr550672 717 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46407992
MGI SNP Detail
Alliance Variant
Chr19:59896109 Rab11fip2 Intron
Rr550672 762 bp distal
SNP C/T T T C C T T T T T T T C T T C T T
rs46871162
MGI SNP Detail
Alliance Variant
Chr19:59896126 Rab11fip2 Intron
Rr550672 779 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs31045095
MGI SNP Detail
Alliance Variant
Chr19:59896173 Rab11fip2 Intron
Rr550672 826 bp distal
SNP C/T T T T C C T T C T T T T T C T T C T T
rs212596409
MGI SNP Detail
Alliance Variant
Chr19:59896179 Rab11fip2 Intron
Rr550672 832 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237704140
MGI SNP Detail
Alliance Variant
Chr19:59896214 Rab11fip2 Intron
Rr550672 867 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30614709
MGI SNP Detail
Alliance Variant
Chr19:59896271 Rab11fip2 Intron
Rr550672 924 bp distal
SNP A/G G G G A A G G A G G G G G A G G A G G
rs30400679
MGI SNP Detail
Alliance Variant
Chr19:59896353 Rab11fip2 Intron
Rr550672 1006 bp distal
SNP A/C A A A C
rs587579988
MGI SNP Detail
Alliance Variant
Chr19:59896506 Rab11fip2 Intron
Rr550672 1159 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251323780
MGI SNP Detail
Alliance Variant
Chr19:59896560 Rab11fip2 Intron
Rr550672 1213 bp distal
SNP A/G A A G G G G A A G G G G A A A G A A G A A G A A A A G G A A A G G G A A A
rs49956936
MGI SNP Detail
Alliance Variant
Chr19:59896686 Rab11fip2 Intron
Rr550672 1339 bp distal
SNP G/T G G G T G G G G G G G T G G T G G
rs234388665
MGI SNP Detail
Alliance Variant
Chr19:59896996 Rab11fip2 Intron
Rr550672 1649 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46611966
MGI SNP Detail
Alliance Variant
Chr19:59897053 Rab11fip2 Intron
Rr550672 1706 bp distal
SNP A/G G G G A A G G G G G G G A G G A G G
rs46999701
MGI SNP Detail
Alliance Variant
Chr19:59897178 Rab11fip2 Intron
Rr550672 1831 bp distal
SNP C/T C C C T T C C C C C C C T C C T C C
rs46302530
MGI SNP Detail
Alliance Variant
Chr19:59897290 Rab11fip2 Intron
Rr550672 1943 bp distal
SNP C/T C C C C C C C C C C C C C T C
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Showing SNP(s) 1 - 71 of 71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory