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Mouse SNP Summary
Symbol
Name
ID
Rr550680
regulatory region 550680
MGI:8012812

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Showing SNP(s) 1 - 49 of 49

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51586414
MGI SNP Detail
Alliance Variant
Chr19:59930090 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1986 bp proximal
SNP A/T T T T T A T T T T T T T T T A
rs219142803
MGI SNP Detail
Alliance Variant
Chr19:59930163 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1913 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229883994
MGI SNP Detail
Alliance Variant
Chr19:59930381 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1695 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225876137
MGI SNP Detail
Alliance Variant
Chr19:59930395 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1681 bp proximal
SNP A/T A T
rs30451604
MGI SNP Detail
Alliance Variant
Chr19:59930405 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1671 bp proximal
SNP A/G A A A G G A A G A A A A A G A A G A A
rs213560578
MGI SNP Detail
Alliance Variant
Chr19:59930682 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1394 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs51192133
MGI SNP Detail
Alliance Variant
Chr19:59930737 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1339 bp proximal
SNP A/G A A A G G A G A A A A A G G A A
rs262804303
MGI SNP Detail
Alliance Variant
Chr19:59930923 Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550680 1153 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224769947
MGI SNP Detail
Alliance Variant
Chr19:59931319 Rab11fip2 Coding-Synonymous
Rab11fip2 Intron
Rr550680 757 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241778794
MGI SNP Detail
Alliance Variant
Chr19:59931523 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550676 within coordinates of
Rr550680 553 bp proximal
Tssr160019 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30612099
MGI SNP Detail
Alliance Variant
Chr19:59931546 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550676 within coordinates of
Rr550680 530 bp proximal
SNP C/G G G C G G G
rs30665888
MGI SNP Detail
Alliance Variant
Chr19:59931572 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550676 within coordinates of
Rr550680 504 bp proximal
SNP A/G G A G G G
rs236291320
MGI SNP Detail
Alliance Variant
Chr19:59931741 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550677 within coordinates of
Rr550680 335 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30351840
MGI SNP Detail
Alliance Variant
Chr19:59931780 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550677 within coordinates of
Rr550680 296 bp proximal
SNP C/G G C G G G
rs219648635
MGI SNP Detail
Alliance Variant
Chr19:59931844 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 Intron
Rab11fip2 mRNA-UTR
Rr550678 within coordinates of
Rr550680 232 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46474961
MGI SNP Detail
Alliance Variant
Chr19:59932166 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 5 bp distal
Rr550681 within coordinates of
SNP G/T T T T G T
rs265565608
MGI SNP Detail
Alliance Variant
Chr19:59932167 Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 6 bp distal
Rr550681 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs50133793
MGI SNP Detail
Alliance Variant
Chr19:59932193 4930470F04Rik within coordinates of
Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 32 bp distal
Rr550681 within coordinates of
SNP C/T T T T C T
rs48312681
MGI SNP Detail
Alliance Variant
Chr19:59932223 4930470F04Rik within coordinates of
Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 62 bp distal
Rr550681 within coordinates of
SNP C/T T T T C T
rs261347452
MGI SNP Detail
Alliance Variant
Chr19:59932228 4930470F04Rik within coordinates of
Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 67 bp distal
Rr550681 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs45905660
MGI SNP Detail
Alliance Variant
Chr19:59932288 4930470F04Rik within coordinates of
Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 127 bp distal
Rr550681 within coordinates of
SNP A A A A A A
rs244290791
MGI SNP Detail
Alliance Variant
Chr19:59932311 4930470F04Rik within coordinates of
Cpgi11133 within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 150 bp distal
Rr550681 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs213620721
MGI SNP Detail
Alliance Variant
Chr19:59932435 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 274 bp distal
Rr550681 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238953841
MGI SNP Detail
Alliance Variant
Chr19:59932438 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 277 bp distal
Rr550681 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252166707
MGI SNP Detail
Alliance Variant
Chr19:59932453 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 292 bp distal
Rr550681 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216984451
MGI SNP Detail
Alliance Variant
Chr19:59932517 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 356 bp distal
Rr550681 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239296178
MGI SNP Detail
Alliance Variant
Chr19:59932555 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 394 bp distal
Rr550681 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T
rs264081711
MGI SNP Detail
Alliance Variant
Chr19:59932569 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 408 bp distal
Rr550681 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G
rs217715832
MGI SNP Detail
Alliance Variant
Chr19:59932574 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 413 bp distal
Rr550681 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C
rs230421827
MGI SNP Detail
Alliance Variant
Chr19:59932669 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 508 bp distal
Rr550681 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49047575
MGI SNP Detail
Alliance Variant
Chr19:59932674 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 513 bp distal
Rr550681 within coordinates of
SNP T T T T T
rs48111972
MGI SNP Detail
Alliance Variant
Chr19:59932724 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 563 bp distal
Rr550681 within coordinates of
SNP A A A A A A
rs51101679
MGI SNP Detail
Alliance Variant
Chr19:59932791 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 630 bp distal
SNP C C C C C C
rs263322159
MGI SNP Detail
Alliance Variant
Chr19:59932804 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 643 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225496506
MGI SNP Detail
Alliance Variant
Chr19:59932805 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 644 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs247698193
MGI SNP Detail
Alliance Variant
Chr19:59932811 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 650 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51648278
MGI SNP Detail
Alliance Variant
Chr19:59932841 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 680 bp distal
SNP C C C C C C
rs47809974
MGI SNP Detail
Alliance Variant
Chr19:59932970 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 809 bp distal
SNP C C C C C C
rs52004888
MGI SNP Detail
Alliance Variant
Chr19:59933076 4930470F04Rik within coordinates of
Gm4219 within coordinates of
Rab11fip2 mRNA-UTR
Rr550680 915 bp distal
SNP G G G G G G
rs257582719
MGI SNP Detail
Chr19:59933196 Gm4219 within coordinates of
Rr550680 1035 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47089958
MGI SNP Detail
Chr19:59933207 Gm4219 within coordinates of
Rr550680 1046 bp distal
SNP T T T T T T
rs46306560
MGI SNP Detail
Chr19:59933233 Gm4219 within coordinates of
Rr550680 1072 bp distal
SNP A A A A A
rs216573134
MGI SNP Detail
Chr19:59933340 Gm4219 within coordinates of
Rr550680 1179 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241919899
MGI SNP Detail
Chr19:59933788 Gm4219 within coordinates of
Rr550680 1627 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30411107
MGI SNP Detail
Chr19:59933882 Gm4219 within coordinates of
Rr550680 1721 bp distal
SNP C/T T T T C T T T
rs211846384
MGI SNP Detail
Chr19:59934022 Gm4219 within coordinates of
Rr550680 1861 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230475172
MGI SNP Detail
Chr19:59934081 Gm4219 within coordinates of
Rr550680 1920 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30750398
MGI SNP Detail
Chr19:59934148 Gm4219 within coordinates of
Rr550680 1987 bp distal
SNP C/T C C T C C C
rs30458885
MGI SNP Detail
Chr19:59934149 Gm4219 within coordinates of
Rr550680 1988 bp distal
SNP A/G A A G A A A
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Showing SNP(s) 1 - 49 of 49

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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