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Mouse SNP Summary
Symbol
Name
ID 		Rr550743
regulatory region 550743
MGI:8012875

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213320717
MGI SNP Detail
Alliance Variant		 Chr19:60567477 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1906 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234773999
MGI SNP Detail
Alliance Variant		 Chr19:60567515 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1868 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47366510
MGI SNP Detail
Alliance Variant		 Chr19:60567542 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1841 bp proximal
 SNP A/G A A A A A A A A A A G A A G A A
rs47109747
MGI SNP Detail
Alliance Variant		 Chr19:60567551 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1832 bp proximal
 SNP C/G C C C C C C G G C
rs46128754
MGI SNP Detail
Alliance Variant		 Chr19:60567570 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1813 bp proximal
 SNP C/T T T T T T T T T T T T C T T C T T
rs251517880
MGI SNP Detail
Alliance Variant		 Chr19:60567950 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1433 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223763944
MGI SNP Detail
Alliance Variant		 Chr19:60567956 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1427 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31233732
MGI SNP Detail
Alliance Variant		 Chr19:60568009 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1374 bp proximal
 SNP A/G A A A G A A
rs30359251
MGI SNP Detail
Alliance Variant		 Chr19:60568024 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1359 bp proximal
 SNP A/G G G G A G G
rs220637963
MGI SNP Detail
Alliance Variant		 Chr19:60568025 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1358 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30307447
MGI SNP Detail
Alliance Variant		 Chr19:60568113 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1270 bp proximal
 SNP A/G G G G A G G
rs260727601
MGI SNP Detail
Alliance Variant		 Chr19:60568118 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1265 bp proximal
 SNP A A A
rs228446855
MGI SNP Detail
Alliance Variant		 Chr19:60568160 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1223 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241081460
MGI SNP Detail
Alliance Variant		 Chr19:60568175 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1208 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258936635
MGI SNP Detail
Alliance Variant		 Chr19:60568176 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1207 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30931563
MGI SNP Detail
Alliance Variant		 Chr19:60568257 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1126 bp proximal
 SNP A/G A A G A A A
rs30425568
MGI SNP Detail
Alliance Variant		 Chr19:60568263 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1120 bp proximal
 SNP A/G G G A G G G
rs31041367
MGI SNP Detail
Alliance Variant		 Chr19:60568292 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1091 bp proximal
 SNP C/T T T C C
rs30359427
MGI SNP Detail
Alliance Variant		 Chr19:60568313 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 1070 bp proximal
 SNP A/C A A C A A A
rs47337451
MGI SNP Detail
Alliance Variant		 Chr19:60568456 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 927 bp proximal
 SNP T T T T T
rs47465368
MGI SNP Detail
Alliance Variant		 Chr19:60568482 Cacul1 Intron
Cacul1 mRNA-UTR
Rr550743 901 bp proximal
 SNP G G G G G
rs233686166
MGI SNP Detail
Alliance Variant		 Chr19:60568618 Cacul1 Intron
Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Rr550742 within coordinates of
Rr550743 765 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251404196
MGI SNP Detail
Alliance Variant		 Chr19:60568674 Cacul1 Intron
Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Rr550742 within coordinates of
Rr550743 709 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580188456
MGI SNP Detail
Alliance Variant		 Chr19:60568725 Cacul1 Intron
Cpgi11136 within coordinates of
Rr550742 within coordinates of
Rr550743 658 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215448075
MGI SNP Detail
Alliance Variant		 Chr19:60568884 Cacul1 Coding-Synonymous
Cpgi11136 within coordinates of
Rr550742 within coordinates of
Rr550743 499 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236481329
MGI SNP Detail
Alliance Variant		 Chr19:60569046 Cacul1 Coding-Synonymous
Cpgi11136 within coordinates of
Gm54602 within coordinates of
Rr550742 within coordinates of
Rr550743 337 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261755705
MGI SNP Detail
Alliance Variant		 Chr19:60569064 Cacul1 Coding-Synonymous
Cpgi11136 within coordinates of
Rr550742 within coordinates of
Rr550743 319 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220963646
MGI SNP Detail
Alliance Variant		 Chr19:60569222 Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 161 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236866554
MGI SNP Detail
Alliance Variant		 Chr19:60569226 Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 157 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30364730
MGI SNP Detail
Alliance Variant		 Chr19:60569351 Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 32 bp proximal
Tssr160031 within coordinates of
 SNP C/T C C C T T T
rs31294563
MGI SNP Detail
Alliance Variant		 Chr19:60569359 Cacul1 mRNA-UTR
Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 24 bp proximal
Tssr160031 within coordinates of
 SNP A/G G G G A A A
rs241050612
MGI SNP Detail		 Chr19:60569480 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr406058 within coordinates of
Rr550743 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263076998
MGI SNP Detail		 Chr19:60569562 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr406058 within coordinates of
Rr550743 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231001492
MGI SNP Detail		 Chr19:60569599 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr406058 within coordinates of
Rr550743 within coordinates of
Tssr160034 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107616085
MGI SNP Detail		 Chr19:60569611 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr406058 within coordinates of
Rr550743 within coordinates of
Tssr160034 within coordinates of
 SNP A A A A A
rs50776322
MGI SNP Detail		 Chr19:60569675 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP G G G G G
rs223524302
MGI SNP Detail		 Chr19:60569747 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247417043
MGI SNP Detail		 Chr19:60569774 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP C/T T C T T C C C C C C C C T C T C C T C T T T T T C C C
rs216700313
MGI SNP Detail		 Chr19:60569824 Cpgi11136 within coordinates of
Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs227656638
MGI SNP Detail		 Chr19:60569862 Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587102131
MGI SNP Detail		 Chr19:60569879 Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245399803
MGI SNP Detail		 Chr19:60569928 Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs214983125
MGI SNP Detail		 Chr19:60569953 Gm59137 within coordinates of
Rr550743 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs238410479
MGI SNP Detail		 Chr19:60569997 Gm59137 within coordinates of
Rr550743 44 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256614445
MGI SNP Detail		 Chr19:60569998 Gm59137 within coordinates of
Rr550743 45 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs30364729
MGI SNP Detail		 Chr19:60570045 Gm59137 within coordinates of
Rr550743 92 bp distal
 SNP C/G C C G C C C
rs30494991
MGI SNP Detail		 Chr19:60570070 Gm59137 within coordinates of
Rr550743 117 bp distal
 SNP C/T T T C T T T
rs254845477
MGI SNP Detail		 Chr19:60570074 Gm59137 within coordinates of
Rr550743 121 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs31140346
MGI SNP Detail		 Chr19:60570090 Gm59137 within coordinates of
Rr550743 137 bp distal
 SNP A/C C C A C C C
rs241012355
MGI SNP Detail		 Chr19:60570377 Gm59137 within coordinates of
Rr550743 424 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30915348
MGI SNP Detail		 Chr19:60570522 Gm59137 within coordinates of
Rr550743 569 bp distal
 SNP C/T T T C T T T
rs223180860
MGI SNP Detail		 Chr19:60570649 Gm59137 within coordinates of
Rr550743 696 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245812299
MGI SNP Detail		 Chr19:60570681 Gm59137 within coordinates of
Rr550743 728 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261856117
MGI SNP Detail		 Chr19:60570936 Gm59137 within coordinates of
Rr550743 983 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217861672
MGI SNP Detail		 Chr19:60571153 Gm59137 within coordinates of
Rr550743 1200 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30359544
MGI SNP Detail		 Chr19:60571163 Gm59137 within coordinates of
Rr550743 1210 bp distal
 SNP A/G A A G
rs30405708
MGI SNP Detail		 Chr19:60571346 Gm59137 within coordinates of
Rr550743 1393 bp distal
 SNP A/G G G A G G G
rs227617951
MGI SNP Detail		 Chr19:60571430 Gm59137 within coordinates of
Rr550743 1477 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252372015
MGI SNP Detail		 Chr19:60571524 Gm59137 within coordinates of
Rr550743 1571 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579542784
MGI SNP Detail		 Chr19:60571642 Rr550743 1689 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A
rs30694743
MGI SNP Detail		 Chr19:60571648 Rr550743 1695 bp distal
 SNP A/G G G G A
rs52248023
MGI SNP Detail		 Chr19:60571683 Rr550743 1730 bp distal
 SNP C C C C C C
rs265331442
MGI SNP Detail		 Chr19:60571705 Rr550743 1752 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230133700
MGI SNP Detail		 Chr19:60571867 Rr550743 1914 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs49183178
MGI SNP Detail		 Chr19:60571924 Rr550743 1971 bp distal
 SNP G G G G
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Showing SNP(s) 1 - 65 of 65
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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