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Mouse SNP Summary
Symbol
Name
ID
Rr551300
regulatory region 551300
MGI:8013432

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231920319
MGI SNP Detail
Alliance Variant
Chr2:5998387 Rr551300 1992 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs258698016
MGI SNP Detail
Alliance Variant
Chr2:5998394 Rr551300 1985 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262579829
MGI SNP Detail
Alliance Variant
Chr2:5998395 Rr551300 1984 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs230766759
MGI SNP Detail
Alliance Variant
Chr2:5998412 Rr551300 1967 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs242043679
MGI SNP Detail
Alliance Variant
Chr2:5998497 Rr551300 1882 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212658060
MGI SNP Detail
Alliance Variant
Chr2:5998498 Rr551300 1881 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs234039243
MGI SNP Detail
Alliance Variant
Chr2:5998678 Rr551300 1701 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G T G G G G
rs247230428
MGI SNP Detail
Alliance Variant
Chr2:5998711 Rr551300 1668 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581508849
MGI SNP Detail
Alliance Variant
Chr2:5998720 Rr551300 1659 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215625690
MGI SNP Detail
Alliance Variant
Chr2:5998786 Rr551300 1593 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G A
rs261988702
MGI SNP Detail
Alliance Variant
Chr2:5998796 Rr551300 1583 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223425176
MGI SNP Detail
Alliance Variant
Chr2:5998812 Rr551300 1567 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27079252
MGI SNP Detail
Alliance Variant
Chr2:5998828 Rr551300 1551 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T
rs249638621
MGI SNP Detail
Alliance Variant
Chr2:5998829 Rr551300 1550 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs584241011
MGI SNP Detail
Alliance Variant
Chr2:5998869 Rr551300 1510 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs218940819
MGI SNP Detail
Alliance Variant
Chr2:5998871 Rr551300 1508 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs242137458
MGI SNP Detail
Alliance Variant
Chr2:5998879 Rr551300 1500 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264520705
MGI SNP Detail
Alliance Variant
Chr2:5998920 Rr551300 1459 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs224517097
MGI SNP Detail
Alliance Variant
Chr2:5999000 Rr551300 1379 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs231302858
MGI SNP Detail
Alliance Variant
Chr2:5999011 Rr551300 1368 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs578369683
MGI SNP Detail
Alliance Variant
Chr2:5999032 Rr551300 1347 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254285702
MGI SNP Detail
Alliance Variant
Chr2:5999057 Rr551300 1322 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228010475
MGI SNP Detail
Alliance Variant
Chr2:5999132 Rr551300 1247 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247196480
MGI SNP Detail
Alliance Variant
Chr2:5999151 Rr551300 1228 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215443115
MGI SNP Detail
Alliance Variant
Chr2:5999174 Rr551300 1205 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27079251
MGI SNP Detail
Alliance Variant
Chr2:5999290 Rr551300 1089 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C A C C C C C C
rs250624566
MGI SNP Detail
Alliance Variant
Chr2:5999323 Rr551300 1056 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs27079250
MGI SNP Detail
Alliance Variant
Chr2:5999420 Rr551300 959 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G A G
rs27079249
MGI SNP Detail
Alliance Variant
Chr2:5999445 Rr551300 934 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A A A G A
rs27079248
MGI SNP Detail
Alliance Variant
Chr2:5999508 Rr551300 871 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C A A A A A A C A A A A A A C A
rs27079247
MGI SNP Detail
Alliance Variant
Chr2:5999538 Rr551300 841 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T C T
rs235623854
MGI SNP Detail
Alliance Variant
Chr2:5999552 Rr551300 827 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264311062
MGI SNP Detail
Alliance Variant
Chr2:5999554 Rr551300 825 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs224409439
MGI SNP Detail
Alliance Variant
Chr2:5999588 Rr551300 791 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249472871
MGI SNP Detail
Alliance Variant
Chr2:5999654 Rr551300 725 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs257302798
MGI SNP Detail
Alliance Variant
Chr2:5999663 Rr551300 716 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C
rs220283947
MGI SNP Detail
Alliance Variant
Chr2:5999664 Rr551300 715 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs236220938
MGI SNP Detail
Alliance Variant
Chr2:5999700 Rr551300 679 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs254989423
MGI SNP Detail
Alliance Variant
Chr2:5999712 Rr551300 667 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227976315
MGI SNP Detail
Alliance Variant
Chr2:5999778 Rr551300 601 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs248076632
MGI SNP Detail
Alliance Variant
Chr2:5999788 Rr551300 591 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs265441306
MGI SNP Detail
Alliance Variant
Chr2:5999789 Rr551300 590 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs254973555
MGI SNP Detail
Alliance Variant
Chr2:5999840 Rr551300 539 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27079246
MGI SNP Detail
Alliance Variant
Chr2:5999941 Rr551300 438 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C A C
rs224117962
MGI SNP Detail
Alliance Variant
Chr2:6000063 Rr551300 316 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244234264
MGI SNP Detail
Alliance Variant
Chr2:6000066 Rr551300 313 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216695905
MGI SNP Detail
Alliance Variant
Chr2:6000083 Rr551300 296 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235593533
MGI SNP Detail
Alliance Variant
Chr2:6000092 Rr551300 287 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260981984
MGI SNP Detail
Alliance Variant
Chr2:6000096 Rr551300 283 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216253580
MGI SNP Detail
Alliance Variant
Chr2:6000110 Rr551300 269 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238804059
MGI SNP Detail
Alliance Variant
Chr2:6000117 Rr551300 262 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262115680
MGI SNP Detail
Alliance Variant
Chr2:6000126 Rr551300 253 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220248998
MGI SNP Detail
Alliance Variant
Chr2:6000134 Rr551300 245 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236179429
MGI SNP Detail
Alliance Variant
Chr2:6000143 Rr551300 236 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249263870
MGI SNP Detail
Alliance Variant
Chr2:6000157 Rr551300 222 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222325361
MGI SNP Detail
Alliance Variant
Chr2:6000164 Rr551300 215 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250760577
MGI SNP Detail
Alliance Variant
Chr2:6000166 Rr551300 213 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262992907
MGI SNP Detail
Alliance Variant
Chr2:6000179 Rr551300 200 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232725810
MGI SNP Detail
Alliance Variant
Chr2:6000180 Rr551300 199 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242826218
MGI SNP Detail
Alliance Variant
Chr2:6000187 Rr551300 192 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258149595
MGI SNP Detail
Alliance Variant
Chr2:6000205 Rr551300 174 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224097405
MGI SNP Detail
Alliance Variant
Chr2:6000212 Rr551300 167 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27079245
MGI SNP Detail
Alliance Variant
Chr2:6000268 Rr551300 111 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/T T T T T T T A T T T T T T A T
rs582085705
MGI SNP Detail
Alliance Variant
Chr2:6000275 Rr551300 104 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260615806
MGI SNP Detail
Alliance Variant
Chr2:6000277 Rr551300 102 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229165537
MGI SNP Detail
Alliance Variant
Chr2:6000285 Rr551300 94 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs257235809
MGI SNP Detail
Alliance Variant
Chr2:6000319 Rr551300 60 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215780745
MGI SNP Detail
Alliance Variant
Chr2:6000322 Rr551300 57 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241195726
MGI SNP Detail
Alliance Variant
Chr2:6000334 Rr551300 45 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250858076
MGI SNP Detail
Alliance Variant
Chr2:6000337 Rr551300 42 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214609713
MGI SNP Detail
Alliance Variant
Chr2:6000359 Rr551300 20 bp proximal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs230236761
MGI SNP Detail
Alliance Variant
Chr2:6000386 Rr551300 within coordinates of
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249227010
MGI SNP Detail
Alliance Variant
Chr2:6000417 Rr551300 within coordinates of
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs27079244
MGI SNP Detail
Alliance Variant
Chr2:6000491 Rr551300 within coordinates of
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G G G G A G
rs240670342
MGI SNP Detail
Alliance Variant
Chr2:6000512 Rr551300 within coordinates of
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27079243
MGI SNP Detail
Alliance Variant
Chr2:6000600 Rr551300 within coordinates of
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A G A
rs224637216
MGI SNP Detail
Alliance Variant
Chr2:6000631 Rr551300 7 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs245622095
MGI SNP Detail
Alliance Variant
Chr2:6000653 Rr551300 29 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs258110034
MGI SNP Detail
Alliance Variant
Chr2:6000658 Rr551300 34 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217989290
MGI SNP Detail
Alliance Variant
Chr2:6000795 Rr551300 171 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237839473
MGI SNP Detail
Alliance Variant
Chr2:6000838 Rr551300 214 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260494475
MGI SNP Detail
Alliance Variant
Chr2:6000877 Rr551300 253 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234861217
MGI SNP Detail
Alliance Variant
Chr2:6001099 Rr551300 475 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252221540
MGI SNP Detail
Alliance Variant
Chr2:6001247 Rr551300 623 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs578802944
MGI SNP Detail
Alliance Variant
Chr2:6001294 Rr551300 670 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582372449
MGI SNP Detail
Alliance Variant
Chr2:6001299 Rr551300 675 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585707826
MGI SNP Detail
Alliance Variant
Chr2:6001315 Rr551300 691 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580346401
MGI SNP Detail
Alliance Variant
Chr2:6001316 Rr551300 692 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49178851
MGI SNP Detail
Alliance Variant
Chr2:6001317 Rr551300 693 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T T T T C
rs582897567
MGI SNP Detail
Alliance Variant
Chr2:6001330 Rr551300 706 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs586560698
MGI SNP Detail
Alliance Variant
Chr2:6001333 Rr551300 709 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A C A A A A
rs579531178
MGI SNP Detail
Alliance Variant
Chr2:6001337 Rr551300 713 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583290260
MGI SNP Detail
Alliance Variant
Chr2:6001339 Rr551300 715 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs586902204
MGI SNP Detail
Alliance Variant
Chr2:6001342 Rr551300 718 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579827337
MGI SNP Detail
Alliance Variant
Chr2:6001354 Rr551300 730 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232436762
MGI SNP Detail
Alliance Variant
Chr2:6001431 Rr551300 807 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs586869896
MGI SNP Detail
Alliance Variant
Chr2:6001442 Rr551300 818 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29816110
MGI SNP Detail
Alliance Variant
Chr2:6001471 Rr551300 847 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A/G A G G A G A
rs581524022
MGI SNP Detail
Alliance Variant
Chr2:6001494 Rr551300 870 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214574143
MGI SNP Detail
Alliance Variant
Chr2:6001497 Rr551300 873 bp distal
Upf2 Intron
Upf2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 138

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory