About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr551420
regulatory region 551420
MGI:8013552

<< first < prev1 next > last >>
Showing SNP(s) 1 - 53 of 53

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221034607
MGI SNP Detail
Alliance Variant
Chr2:6548138 Celf2 mRNA-UTR
Rr551420 1940 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs241141457
MGI SNP Detail
Alliance Variant
Chr2:6548323 Celf2 mRNA-UTR
Rr551420 1755 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs257446085
MGI SNP Detail
Alliance Variant
Chr2:6548475 Celf2 mRNA-UTR
Rr551420 1603 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs4222951
MGI SNP Detail
Alliance Variant
Chr2:6548536 Celf2 mRNA-UTR
Rr551420 1542 bp proximal
SNP A/G A A A A A G A
rs4222952
MGI SNP Detail
Alliance Variant
Chr2:6548771 Celf2 mRNA-UTR
Rr551420 1307 bp proximal
SNP C/T C C C C C T C
rs4222953
MGI SNP Detail
Alliance Variant
Chr2:6548772 Celf2 mRNA-UTR
Rr551420 1306 bp proximal
SNP G/T G G G G G T G
rs4222954
MGI SNP Detail
Alliance Variant
Chr2:6548807 Celf2 mRNA-UTR
Rr551420 1271 bp proximal
Tssr22447 within coordinates of
SNP A/G G G G G G A G
rs259309566
MGI SNP Detail
Alliance Variant
Chr2:6548833 Celf2 mRNA-UTR
Rr551420 1245 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219749420
MGI SNP Detail
Alliance Variant
Chr2:6548864 Celf2 mRNA-UTR
Rr551420 1214 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233222549
MGI SNP Detail
Alliance Variant
Chr2:6548866 Celf2 mRNA-UTR
Rr551420 1212 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246209671
MGI SNP Detail
Alliance Variant
Chr2:6548902 Celf2 mRNA-UTR
Rr551420 1176 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213934123
MGI SNP Detail
Alliance Variant
Chr2:6550504 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231900711
MGI SNP Detail
Alliance Variant
Chr2:6550542 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255286569
MGI SNP Detail
Alliance Variant
Chr2:6550822 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 22 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220853466
MGI SNP Detail
Alliance Variant
Chr2:6550839 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 39 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239154043
MGI SNP Detail
Alliance Variant
Chr2:6550850 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 50 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs586869816
MGI SNP Detail
Alliance Variant
Chr2:6550896 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 96 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs387819050
MGI SNP Detail
Alliance Variant
Chr2:6551426 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 626 bp distal
Rr551421 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584818777
MGI SNP Detail
Alliance Variant
Chr2:6551450 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 650 bp distal
Rr551421 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264052126
MGI SNP Detail
Alliance Variant
Chr2:6551499 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 699 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220976965
MGI SNP Detail
Alliance Variant
Chr2:6551509 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 709 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs241256922
MGI SNP Detail
Alliance Variant
Chr2:6551669 Celf2 Intron
Celf2 mRNA-UTR
Rr551420 869 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C T
rs257388818
MGI SNP Detail
Alliance Variant
Chr2:6551713 Celf2 Intron
Celf2 mRNA-UTR
Celf2 Noncoding-Transcript-Variant
Rr551420 913 bp distal
Rr551421 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220172343
MGI SNP Detail
Alliance Variant
Chr2:6551881 Celf2 mRNA-UTR
Celf2 Noncoding-Transcript-Variant
Rr551420 1081 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs247022957
MGI SNP Detail
Alliance Variant
Chr2:6552078 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1278 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261624706
MGI SNP Detail
Alliance Variant
Chr2:6552169 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1369 bp distal
Rr551421 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229505858
MGI SNP Detail
Alliance Variant
Chr2:6552201 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1401 bp distal
Rr551421 within coordinates of
Rr551422 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs247510876
MGI SNP Detail
Alliance Variant
Chr2:6552212 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1412 bp distal
Rr551421 within coordinates of
Rr551422 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs266167694
MGI SNP Detail
Alliance Variant
Chr2:6552290 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1490 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C T
rs227151099
MGI SNP Detail
Alliance Variant
Chr2:6552306 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1506 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246331194
MGI SNP Detail
Alliance Variant
Chr2:6552328 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1528 bp distal
Rr551421 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs386896795
MGI SNP Detail
Alliance Variant
Chr2:6552353 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1553 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213863782
MGI SNP Detail
Alliance Variant
Chr2:6552363 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1563 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226356319
MGI SNP Detail
Alliance Variant
Chr2:6552384 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1584 bp distal
Rr551421 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs253250461
MGI SNP Detail
Alliance Variant
Chr2:6552387 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1587 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs212583493
MGI SNP Detail
Alliance Variant
Chr2:6552393 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1593 bp distal
Rr551421 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs241839924
MGI SNP Detail
Alliance Variant
Chr2:6552437 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1637 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs260610392
MGI SNP Detail
Alliance Variant
Chr2:6552445 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1645 bp distal
Rr551421 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214875030
MGI SNP Detail
Alliance Variant
Chr2:6552463 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1663 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234709674
MGI SNP Detail
Alliance Variant
Chr2:6552476 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1676 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G A G A G G G G G G G G G G G G A G G G G G G G A G G G A
rs251200877
MGI SNP Detail
Alliance Variant
Chr2:6552477 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1677 bp distal
Rr551421 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220299992
MGI SNP Detail
Alliance Variant
Chr2:6552498 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1698 bp distal
Rr551421 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs241006135
MGI SNP Detail
Alliance Variant
Chr2:6552505 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1705 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261477964
MGI SNP Detail
Alliance Variant
Chr2:6552519 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1719 bp distal
Rr551421 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221778581
MGI SNP Detail
Alliance Variant
Chr2:6552531 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1731 bp distal
Rr551421 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G C
rs250404191
MGI SNP Detail
Alliance Variant
Chr2:6552532 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1732 bp distal
Rr551421 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs259910775
MGI SNP Detail
Alliance Variant
Chr2:6552550 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1750 bp distal
Rr551421 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226906060
MGI SNP Detail
Alliance Variant
Chr2:6552576 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1776 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240154573
MGI SNP Detail
Alliance Variant
Chr2:6552662 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1862 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255798269
MGI SNP Detail
Alliance Variant
Chr2:6552667 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1867 bp distal
Rr551421 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231654045
MGI SNP Detail
Alliance Variant
Chr2:6552678 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1878 bp distal
Rr551421 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs249344753
MGI SNP Detail
Alliance Variant
Chr2:6552760 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1960 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213615858
MGI SNP Detail
Alliance Variant
Chr2:6552789 Celf2 Intron
Celf2 Noncoding-Transcript-Variant
Rr551420 1989 bp distal
Rr551421 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 53 of 53

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory