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Mouse SNP Summary
Symbol
Name
ID
Rr551592
regulatory region 551592
MGI:8013724

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27150232
MGI SNP Detail
Alliance Variant
Chr2:9879585 Cpgi11182 within coordinates of
Gata3 Coding-Synonymous
Gata3 Noncoding-Transcript-Variant
Rr551592 1992 bp proximal
SNP A/G G G G G G G G G A A G G G G G
rs216586199
MGI SNP Detail
Alliance Variant
Chr2:9879609 Cpgi11182 within coordinates of
Gata3 Coding-Synonymous
Gata3 Noncoding-Transcript-Variant
Rr551592 1968 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224930356
MGI SNP Detail
Alliance Variant
Chr2:9879648 Cpgi11182 within coordinates of
Gata3 Coding-Synonymous
Gata3 Noncoding-Transcript-Variant
Rr551592 1929 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581662054
MGI SNP Detail
Alliance Variant
Chr2:9879783 Cpgi11182 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1794 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243482530
MGI SNP Detail
Alliance Variant
Chr2:9879827 Cpgi11182 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1750 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C T T C C C C T T C C C C C C T C C C C C C C C C C C C
rs27150231
MGI SNP Detail
Alliance Variant
Chr2:9879915 Cpgi11182 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Gata3 Splice-Site
Rr551592 1662 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs238155109
MGI SNP Detail
Alliance Variant
Chr2:9880039 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1538 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253282439
MGI SNP Detail
Alliance Variant
Chr2:9880040 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1537 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216323485
MGI SNP Detail
Alliance Variant
Chr2:9880057 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1520 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235354286
MGI SNP Detail
Alliance Variant
Chr2:9880061 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1516 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252793371
MGI SNP Detail
Alliance Variant
Chr2:9880149 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1428 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218928416
MGI SNP Detail
Alliance Variant
Chr2:9880155 Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1422 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230272706
MGI SNP Detail
Alliance Variant
Chr2:9880247 Gata3 Intron
Rr551592 1330 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs250838283
MGI SNP Detail
Alliance Variant
Chr2:9880260 Gata3 Intron
Rr551592 1317 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222975570
MGI SNP Detail
Alliance Variant
Chr2:9880286 Gata3 Intron
Rr551592 1291 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245537249
MGI SNP Detail
Alliance Variant
Chr2:9880292 Gata3 Intron
Rr551592 1285 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T
rs263414101
MGI SNP Detail
Alliance Variant
Chr2:9880430 Gata3 Intron
Rr551592 1147 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223862962
MGI SNP Detail
Alliance Variant
Chr2:9880442 Gata3 Intron
Rr551592 1135 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G C C G G G G C C G G G G G G C G G G G G G G G G G G G
rs242574623
MGI SNP Detail
Alliance Variant
Chr2:9880455 Gata3 Intron
Rr551592 1122 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260469809
MGI SNP Detail
Alliance Variant
Chr2:9880472 Gata3 Intron
Rr551592 1105 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27150230
MGI SNP Detail
Alliance Variant
Chr2:9880706 Gata3 Intron
Rr551592 871 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs243446886
MGI SNP Detail
Alliance Variant
Chr2:9880749 Gata3 Intron
Rr551592 828 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265278180
MGI SNP Detail
Alliance Variant
Chr2:9881004 Gata3 Intron
Rr551592 573 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27150229
MGI SNP Detail
Alliance Variant
Chr2:9881053 Gata3 Intron
Rr551592 524 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs258294066
MGI SNP Detail
Alliance Variant
Chr2:9881083 Gata3 Intron
Rr551592 494 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27150228
MGI SNP Detail
Alliance Variant
Chr2:9881089 Gata3 Intron
Rr551592 488 bp proximal
SNP A/G G G G G G G A G G G A G G A G
rs235324427
MGI SNP Detail
Alliance Variant
Chr2:9881098 Gata3 Intron
Rr551592 479 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246834577
MGI SNP Detail
Alliance Variant
Chr2:9881174 Gata3 Intron
Rr551592 403 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C C C C C C C C C C C C C
rs47329541
MGI SNP Detail
Alliance Variant
Chr2:9881254 Gata3 Intron
Rr551592 323 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G A A G G G G A A G G G G G G A G G G G G G G G G G G G
rs222582815
MGI SNP Detail
Alliance Variant
Chr2:9881297 Gata3 Intron
Rr551592 280 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239080367
MGI SNP Detail
Alliance Variant
Chr2:9881300 Gata3 Intron
Rr551592 277 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263150111
MGI SNP Detail
Alliance Variant
Chr2:9881417 Gata3 Intron
Rr551592 160 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223881566
MGI SNP Detail
Alliance Variant
Chr2:9881453 Gata3 Intron
Rr551592 124 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27150227
MGI SNP Detail
Alliance Variant
Chr2:9881507 Gata3 Intron
Rr551592 70 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs27150226
MGI SNP Detail
Alliance Variant
Chr2:9881546 Gata3 Intron
Rr551592 31 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs218702742
MGI SNP Detail
Alliance Variant
Chr2:9881571 Gata3 Intron
Rr551592 6 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27150225
MGI SNP Detail
Alliance Variant
Chr2:9881612 Gata3 Intron
Rr551592 within coordinates of
SNP A/G G G G G G G G G G A G G A G
rs262720220
MGI SNP Detail
Alliance Variant
Chr2:9881626 Gata3 Intron
Rr551592 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27150224
MGI SNP Detail
Alliance Variant
Chr2:9881659 Gata3 Intron
Rr551592 within coordinates of
SNP C/T T T T T T T T T T T C T T C T
rs253166585
MGI SNP Detail
Alliance Variant
Chr2:9881695 Gata3 Intron
Rr551592 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27150223
MGI SNP Detail
Alliance Variant
Chr2:9881703 Gata3 Intron
Rr551592 within coordinates of
SNP C/T C C C C C C C C T T C C C C T
rs229282363
MGI SNP Detail
Alliance Variant
Chr2:9881727 Gata3 Intron
Rr551592 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs27150222
MGI SNP Detail
Alliance Variant
Chr2:9881733 Gata3 Intron
Rr551592 within coordinates of
SNP A/T A A A A A A T A T T T A A T T
rs27150221
MGI SNP Detail
Alliance Variant
Chr2:9881794 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP C/T C C C C C C T C C T C
rs213023140
MGI SNP Detail
Alliance Variant
Chr2:9881938 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223650447
MGI SNP Detail
Alliance Variant
Chr2:9881939 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256564860
MGI SNP Detail
Alliance Variant
Chr2:9881991 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214171403
MGI SNP Detail
Alliance Variant
Chr2:9881992 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27150220
MGI SNP Detail
Alliance Variant
Chr2:9882001 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP A/T T T T T T T T T A A A T T A A
rs27150219
MGI SNP Detail
Alliance Variant
Chr2:9882032 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217816350
MGI SNP Detail
Alliance Variant
Chr2:9882033 Cpgi11183 within coordinates of
Gata3 Intron
Rr551592 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27150218
MGI SNP Detail
Alliance Variant
Chr2:9882101 Cpgi11183 within coordinates of
Gata3 Intron
Gm13256 within coordinates of
Rr551592 24 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs254044800
MGI SNP Detail
Alliance Variant
Chr2:9882124 Cpgi11183 within coordinates of
Gata3 Intron
Gm13256 within coordinates of
Rr551592 47 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27150217
MGI SNP Detail
Alliance Variant
Chr2:9882411 Cpgi11183 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 334 bp distal
SNP A/G G G G G G G G G G G A G G G G
rs218625514
MGI SNP Detail
Alliance Variant
Chr2:9882564 Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 487 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27150216
MGI SNP Detail
Alliance Variant
Chr2:9882567 Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 490 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs262366137
MGI SNP Detail
Alliance Variant
Chr2:9882588 Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 511 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222419185
MGI SNP Detail
Alliance Variant
Chr2:9882627 Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 550 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248823805
MGI SNP Detail
Alliance Variant
Chr2:9882637 Gata3 Intron
Gata3 mRNA-UTR
Gm13256 within coordinates of
Rr551592 560 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585105977
MGI SNP Detail
Alliance Variant
Chr2:9882653 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 576 bp distal
Tssr22555 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs263160044
MGI SNP Detail
Alliance Variant
Chr2:9882663 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 586 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578488817
MGI SNP Detail
Alliance Variant
Chr2:9882664 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 587 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A
rs581643562
MGI SNP Detail
Alliance Variant
Chr2:9882666 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 589 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27150215
MGI SNP Detail
Alliance Variant
Chr2:9882734 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 657 bp distal
SNP C/T C C C C C C C C C T C C T C
rs240870354
MGI SNP Detail
Alliance Variant
Chr2:9882774 Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 697 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27150214
MGI SNP Detail
Alliance Variant
Chr2:9882885 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 808 bp distal
SNP C/T T T T T T T C T T T C T T C T
rs27150213
MGI SNP Detail
Alliance Variant
Chr2:9882926 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 849 bp distal
SNP A/G A A A A A A A A A A G A A A A
rs223623682
MGI SNP Detail
Alliance Variant
Chr2:9882977 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 900 bp distal
Tssr22558 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251665665
MGI SNP Detail
Alliance Variant
Chr2:9883029 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 952 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C C T T T T T T T T T T T T T T T T T T T T C C C
rs214449484
MGI SNP Detail
Alliance Variant
Chr2:9883036 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 959 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232626878
MGI SNP Detail
Alliance Variant
Chr2:9883114 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 1037 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257661154
MGI SNP Detail
Alliance Variant
Chr2:9883139 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 mRNA-UTR
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 1062 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217734522
MGI SNP Detail
Alliance Variant
Chr2:9883670 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Gm13256 within coordinates of
Rr551592 1593 bp distal
Rr551593 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27150212
MGI SNP Detail
Alliance Variant
Chr2:9883840 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1763 bp distal
Rr551593 within coordinates of
SNP A/T T T T T T T A T T A T
rs254011459
MGI SNP Detail
Alliance Variant
Chr2:9883987 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1910 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212564262
MGI SNP Detail
Alliance Variant
Chr2:9884002 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1925 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235901252
MGI SNP Detail
Alliance Variant
Chr2:9884061 Cpgi11184 within coordinates of
Gata3 Intron
Gata3 Noncoding-Transcript-Variant
Rr551592 1984 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C T T C C C C T T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 77 of 77

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory