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Mouse SNP Summary
Symbol
Name
ID
Rr552544
regulatory region 552544
MGI:8014676

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222471230
MGI SNP Detail
Alliance Variant
Chr2:20212128 Etl4 Intron
Rr552544 1969 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs246806910
MGI SNP Detail
Alliance Variant
Chr2:20212151 Etl4 Intron
Rr552544 1946 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C C
rs258627783
MGI SNP Detail
Alliance Variant
Chr2:20212164 Etl4 Intron
Rr552544 1933 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs221439964
MGI SNP Detail
Alliance Variant
Chr2:20212236 Etl4 Intron
Rr552544 1861 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580103161
MGI SNP Detail
Alliance Variant
Chr2:20212248 Etl4 Intron
Rr552544 1849 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs241745324
MGI SNP Detail
Alliance Variant
Chr2:20212291 Etl4 Intron
Rr552544 1806 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs261082351
MGI SNP Detail
Alliance Variant
Chr2:20212297 Etl4 Intron
Rr552544 1800 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs224045742
MGI SNP Detail
Alliance Variant
Chr2:20212362 Etl4 Intron
Rr552544 1735 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241958327
MGI SNP Detail
Alliance Variant
Chr2:20212363 Etl4 Intron
Rr552544 1734 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs265136257
MGI SNP Detail
Alliance Variant
Chr2:20212396 Etl4 Intron
Rr552544 1701 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231179962
MGI SNP Detail
Alliance Variant
Chr2:20212413 Etl4 Intron
Rr552544 1684 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257671140
MGI SNP Detail
Alliance Variant
Chr2:20212464 Etl4 Intron
Rr552544 1633 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs258555059
MGI SNP Detail
Alliance Variant
Chr2:20212478 Etl4 Intron
Rr552544 1619 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228510001
MGI SNP Detail
Alliance Variant
Chr2:20212508 Etl4 Intron
Rr552544 1589 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs247550018
MGI SNP Detail
Alliance Variant
Chr2:20212593 Etl4 Intron
Rr552544 1504 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212234887
MGI SNP Detail
Alliance Variant
Chr2:20212607 Etl4 Intron
Rr552544 1490 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250894468
MGI SNP Detail
Alliance Variant
Chr2:20212760 Etl4 Intron
Rr552544 1337 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs584188819
MGI SNP Detail
Alliance Variant
Chr2:20212785 Etl4 Intron
Rr552544 1312 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C
rs262884206
MGI SNP Detail
Alliance Variant
Chr2:20212916 Etl4 Intron
Rr552544 1181 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs221869866
MGI SNP Detail
Alliance Variant
Chr2:20212934 Etl4 Intron
Rr552544 1163 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs235245439
MGI SNP Detail
Alliance Variant
Chr2:20213021 Etl4 Intron
Rr552544 1076 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs254900906
MGI SNP Detail
Alliance Variant
Chr2:20213031 Etl4 Intron
Rr552544 1066 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs217881101
MGI SNP Detail
Alliance Variant
Chr2:20213034 Etl4 Intron
Rr552544 1063 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs244712779
MGI SNP Detail
Alliance Variant
Chr2:20213045 Etl4 Intron
Rr552544 1052 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs262258928
MGI SNP Detail
Alliance Variant
Chr2:20213070 Etl4 Intron
Rr552544 1027 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223450546
MGI SNP Detail
Alliance Variant
Chr2:20213073 Etl4 Intron
Rr552544 1024 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245706280
MGI SNP Detail
Alliance Variant
Chr2:20213183 Etl4 Intron
Rr552544 914 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G T G G G G
rs258482082
MGI SNP Detail
Alliance Variant
Chr2:20213288 Etl4 Intron
Rr552544 809 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228864288
MGI SNP Detail
Alliance Variant
Chr2:20213339 Etl4 Intron
Rr552544 758 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs247804842
MGI SNP Detail
Alliance Variant
Chr2:20213398 Etl4 Intron
Rr372875 within coordinates of
Rr552544 699 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G C G G G G G G G G G G G G
rs253934318
MGI SNP Detail
Alliance Variant
Chr2:20213426 Etl4 Intron
Rr372875 within coordinates of
Rr552544 671 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228880024
MGI SNP Detail
Alliance Variant
Chr2:20213489 Etl4 Intron
Rr372875 within coordinates of
Rr552544 608 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs255418474
MGI SNP Detail
Alliance Variant
Chr2:20213498 Etl4 Intron
Rr372875 within coordinates of
Rr552544 599 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215010359
MGI SNP Detail
Alliance Variant
Chr2:20213513 Etl4 Intron
Rr372875 within coordinates of
Rr552544 584 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs27151429
MGI SNP Detail
Alliance Variant
Chr2:20213542 Etl4 Intron
Rr372875 within coordinates of
Rr552544 555 bp proximal
SNP A/G A A G G A A A A G A A A A A A
rs252176112
MGI SNP Detail
Alliance Variant
Chr2:20213546 Etl4 Intron
Rr372875 within coordinates of
Rr552544 551 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215813283
MGI SNP Detail
Alliance Variant
Chr2:20213551 Etl4 Intron
Rr372875 within coordinates of
Rr552544 546 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235485025
MGI SNP Detail
Alliance Variant
Chr2:20213558 Etl4 Intron
Rr372875 within coordinates of
Rr552544 539 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255254380
MGI SNP Detail
Alliance Variant
Chr2:20213572 Etl4 Intron
Rr372875 within coordinates of
Rr552544 525 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs217826017
MGI SNP Detail
Alliance Variant
Chr2:20213628 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 469 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235212052
MGI SNP Detail
Alliance Variant
Chr2:20213632 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 465 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261882639
MGI SNP Detail
Alliance Variant
Chr2:20213643 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 454 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223170487
MGI SNP Detail
Alliance Variant
Chr2:20213649 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 448 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248234879
MGI SNP Detail
Alliance Variant
Chr2:20213748 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 349 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs258363558
MGI SNP Detail
Alliance Variant
Chr2:20213775 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 322 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs222197859
MGI SNP Detail
Alliance Variant
Chr2:20213776 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 321 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs241869570
MGI SNP Detail
Alliance Variant
Chr2:20213808 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 289 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs254247387
MGI SNP Detail
Alliance Variant
Chr2:20213847 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 250 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs229315107
MGI SNP Detail
Alliance Variant
Chr2:20213864 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 233 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs243271819
MGI SNP Detail
Alliance Variant
Chr2:20213903 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 194 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265328514
MGI SNP Detail
Alliance Variant
Chr2:20213960 Etl4 Intron
Rr372875 within coordinates of
Rr552543 within coordinates of
Rr552544 137 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231788796
MGI SNP Detail
Alliance Variant
Chr2:20214042 Etl4 Intron
Rr372875 within coordinates of
Rr552544 55 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247428272
MGI SNP Detail
Alliance Variant
Chr2:20214104 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215755349
MGI SNP Detail
Alliance Variant
Chr2:20214120 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs228478152
MGI SNP Detail
Alliance Variant
Chr2:20214197 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27151428
MGI SNP Detail
Alliance Variant
Chr2:20214199 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/G A A A A A A A G A A
rs212063153
MGI SNP Detail
Alliance Variant
Chr2:20214211 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236820840
MGI SNP Detail
Alliance Variant
Chr2:20214254 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256795580
MGI SNP Detail
Alliance Variant
Chr2:20214314 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214780612
MGI SNP Detail
Alliance Variant
Chr2:20214364 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237616262
MGI SNP Detail
Alliance Variant
Chr2:20214374 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G A
rs251760334
MGI SNP Detail
Alliance Variant
Chr2:20214392 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222145262
MGI SNP Detail
Alliance Variant
Chr2:20214397 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs241858822
MGI SNP Detail
Alliance Variant
Chr2:20214409 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248519347
MGI SNP Detail
Alliance Variant
Chr2:20214473 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
Tssr16428 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222150693
MGI SNP Detail
Alliance Variant
Chr2:20214534 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs246417640
MGI SNP Detail
Alliance Variant
Chr2:20214535 Etl4 Intron
Rr372875 within coordinates of
Rr552544 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs262798131
MGI SNP Detail
Alliance Variant
Chr2:20214567 Etl4 Intron
Rr372875 within coordinates of
Rr552544 10 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs232240302
MGI SNP Detail
Alliance Variant
Chr2:20214583 Etl4 Intron
Rr372875 within coordinates of
Rr552544 26 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs241386807
MGI SNP Detail
Alliance Variant
Chr2:20214602 Etl4 Intron
Rr372875 within coordinates of
Rr552544 45 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260814150
MGI SNP Detail
Alliance Variant
Chr2:20214608 Etl4 Intron
Rr372875 within coordinates of
Rr552544 51 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs587535192
MGI SNP Detail
Alliance Variant
Chr2:20214619 Etl4 Intron
Rr372875 within coordinates of
Rr552544 62 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs581476644
MGI SNP Detail
Alliance Variant
Chr2:20214623 Etl4 Intron
Rr372875 within coordinates of
Rr552544 66 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582919936
MGI SNP Detail
Alliance Variant
Chr2:20214642 Etl4 Intron
Rr372875 within coordinates of
Rr552544 85 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs228472107
MGI SNP Detail
Alliance Variant
Chr2:20214746 Etl4 Intron
Rr372875 within coordinates of
Rr552544 189 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248715377
MGI SNP Detail
Alliance Variant
Chr2:20214907 Etl4 Intron
Rr372875 within coordinates of
Rr552544 350 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs212169248
MGI SNP Detail
Alliance Variant
Chr2:20214924 Etl4 Intron
Rr372875 within coordinates of
Rr552544 367 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs228684288
MGI SNP Detail
Alliance Variant
Chr2:20214957 Etl4 Intron
Rr372875 within coordinates of
Rr552544 400 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs255249328
MGI SNP Detail
Alliance Variant
Chr2:20215010 Etl4 Intron
Rr372875 within coordinates of
Rr552544 453 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs214343526
MGI SNP Detail
Alliance Variant
Chr2:20215019 Etl4 Intron
Rr372875 within coordinates of
Rr552544 462 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs232565401
MGI SNP Detail
Alliance Variant
Chr2:20215066 Etl4 Intron
Rr372875 within coordinates of
Rr552544 509 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251750243
MGI SNP Detail
Alliance Variant
Chr2:20215083 Etl4 Intron
Rr372875 within coordinates of
Rr552544 526 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs216500413
MGI SNP Detail
Alliance Variant
Chr2:20215087 Etl4 Intron
Rr372875 within coordinates of
Rr552544 530 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs235414188
MGI SNP Detail
Alliance Variant
Chr2:20215101 Etl4 Intron
Rr372875 within coordinates of
Rr552544 544 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs255731901
MGI SNP Detail
Alliance Variant
Chr2:20215110 Etl4 Intron
Rr372875 within coordinates of
Rr552544 553 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs221439030
MGI SNP Detail
Alliance Variant
Chr2:20215172 Etl4 Intron
Rr552544 615 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs243559029
MGI SNP Detail
Alliance Variant
Chr2:20215174 Etl4 Intron
Rr552544 617 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262664351
MGI SNP Detail
Alliance Variant
Chr2:20215193 Etl4 Intron
Rr552544 636 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs224280892
MGI SNP Detail
Alliance Variant
Chr2:20215214 Etl4 Intron
Rr552544 657 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241377471
MGI SNP Detail
Alliance Variant
Chr2:20215327 Etl4 Intron
Rr552544 770 bp distal
SNP A/T A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A T A A A A A A T A A A A
rs260765234
MGI SNP Detail
Alliance Variant
Chr2:20215374 Etl4 Intron
Rr552544 817 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C T C C C C
rs223650151
MGI SNP Detail
Alliance Variant
Chr2:20215491 Etl4 Intron
Rr552544 934 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs49904730
MGI SNP Detail
Alliance Variant
Chr2:20215549 Etl4 Intron
Rr552544 992 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C T C C C C C C
rs261376300
MGI SNP Detail
Alliance Variant
Chr2:20215588 Etl4 Intron
Rr552544 1031 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229090441
MGI SNP Detail
Alliance Variant
Chr2:20215603 Etl4 Intron
Rr552544 1046 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs250635957
MGI SNP Detail
Alliance Variant
Chr2:20215616 Etl4 Intron
Rr552544 1059 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T G T T T T T T T G T T T G
rs265291769
MGI SNP Detail
Alliance Variant
Chr2:20215617 Etl4 Intron
Rr552544 1060 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T T T T T T T A T T T T T T T A T T T A
rs226523203
MGI SNP Detail
Alliance Variant
Chr2:20215629 Etl4 Intron
Rr552544 1072 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245717380
MGI SNP Detail
Alliance Variant
Chr2:20215632 Etl4 Intron
Rr552544 1075 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs216389142
MGI SNP Detail
Alliance Variant
Chr2:20215646 Etl4 Intron
Rr552544 1089 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 130

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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