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Mouse SNP Summary
Symbol
Name
ID
Rr552853
regulatory region 552853
MGI:8014985

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579018661
MGI SNP Detail
Alliance Variant
Chr2:24235697 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1979 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs582428769
MGI SNP Detail
Alliance Variant
Chr2:24235785 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1891 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239002836
MGI SNP Detail
Alliance Variant
Chr2:24235872 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1804 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs258491457
MGI SNP Detail
Alliance Variant
Chr2:24235915 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1761 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27187389
MGI SNP Detail
Alliance Variant
Chr2:24235927 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1749 bp proximal
SNP A/G A A A A A A G A
rs27187388
MGI SNP Detail
Alliance Variant
Chr2:24235991 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1685 bp proximal
SNP A/G G G G G G G G G G G G G A G
rs27187387
MGI SNP Detail
Alliance Variant
Chr2:24236015 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1661 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs233802395
MGI SNP Detail
Alliance Variant
Chr2:24236059 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1617 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242299932
MGI SNP Detail
Alliance Variant
Chr2:24236075 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1601 bp proximal
SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T A T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs254300721
MGI SNP Detail
Alliance Variant
Chr2:24236084 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1592 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs8241280
MGI SNP Detail
Alliance Variant
Chr2:24236106 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1570 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C A A C
rs27187386
MGI SNP Detail
Alliance Variant
Chr2:24236156 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1520 bp proximal
SNP A/C A A A A A A A A A A A A A C A
rs8241279
MGI SNP Detail
Alliance Variant
Chr2:24236226 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1450 bp proximal
SNP C/T C C C C C C C C C C C C C C T
rs8241278
MGI SNP Detail
Alliance Variant
Chr2:24236297 Il1rn Intron
Il1rn Noncoding-Transcript-Variant
Rr552853 1379 bp proximal
SNP C/G G G G G G G G G G G G C G G G G G G G G G G G
rs8247998
MGI SNP Detail
Alliance Variant
Chr2:24236459 Il1rn Intron
Rr552853 1217 bp proximal
SNP G/T T T T T T T T T T T G
rs8247999
MGI SNP Detail
Alliance Variant
Chr2:24236633 Il1rn Intron
Rr552853 1043 bp proximal
SNP A/G A A A A G A A A G
rs8248000
MGI SNP Detail
Alliance Variant
Chr2:24236638 Il1rn Intron
Rr552853 1038 bp proximal
SNP C/G C C G C C C G
rs8248001
MGI SNP Detail
Alliance Variant
Chr2:24236678 Il1rn Intron
Rr552853 998 bp proximal
SNP G/T T T T T G
rs213279627
MGI SNP Detail
Alliance Variant
Chr2:24236700 Il1rn Intron
Rr552853 976 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231826530
MGI SNP Detail
Alliance Variant
Chr2:24236729 Il1rn Intron
Rr552853 947 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8248003
MGI SNP Detail
Alliance Variant
Chr2:24236783 Il1rn Intron
Rr552853 893 bp proximal
SNP A/C A A A A A A A A A A A A A C
rs8248004
MGI SNP Detail
Alliance Variant
Chr2:24236791 Il1rn Intron
Rr552853 885 bp proximal
SNP A/G A A A A A A A A A A A A A G
rs8248005
MGI SNP Detail
Alliance Variant
Chr2:24236882 Il1rn Intron
Rr552853 794 bp proximal
SNP C/T C C C C C C C C C C C C C T
rs8248006
MGI SNP Detail
Alliance Variant
Chr2:24236884 Il1rn Intron
Rr552853 792 bp proximal
SNP C/T T T T T T T T T T T C T T T T T T T T T T
rs8248007
MGI SNP Detail
Alliance Variant
Chr2:24236903 Il1rn Intron
Rr552853 773 bp proximal
SNP A/G G G G G G G G G G G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8248008
MGI SNP Detail
Alliance Variant
Chr2:24236938 Il1rn Intron
Rr552853 738 bp proximal
SNP A/G G G G G G G G G G G G G A
rs8248009
MGI SNP Detail
Alliance Variant
Chr2:24237018 Il1rn Intron
Rr552853 658 bp proximal
SNP A/G G G G G G G G G A G A G G G G G G A A G
rs225306787
MGI SNP Detail
Alliance Variant
Chr2:24237026 Il1rn Intron
Rr552853 650 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238054971
MGI SNP Detail
Alliance Variant
Chr2:24237235 Il1rn Intron
Rr552853 441 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27187385
MGI SNP Detail
Alliance Variant
Chr2:24237325 Il1rn Intron
Rr552853 351 bp proximal
SNP C/T T T T T T T C T T T T T C T
rs232136591
MGI SNP Detail
Alliance Variant
Chr2:24237334 Il1rn Intron
Rr552853 342 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27187384
MGI SNP Detail
Alliance Variant
Chr2:24237378 Il1rn Intron
Rr552853 298 bp proximal
SNP G/T T T T T T T T T T T T G T
rs218910456
MGI SNP Detail
Alliance Variant
Chr2:24237381 Il1rn Intron
Rr552853 295 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235279886
MGI SNP Detail
Alliance Variant
Chr2:24237427 Il1rn Intron
Rr552853 249 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243824980
MGI SNP Detail
Alliance Variant
Chr2:24237505 Il1rn Coding-Synonymous
Rr552853 171 bp proximal
Tssr16582 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs386893724
MGI SNP Detail
Alliance Variant
Chr2:24237785 Il1rn Intron
Rr552853 88 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T C T T T C T T T T T T T T T T T T T T T T C T T T T T C
rs8247991
MGI SNP Detail
Alliance Variant
Chr2:24237801 Il1rn Intron
Rr552853 104 bp distal
SNP C/G C C C C C C C C C C C C C G
rs8247992
MGI SNP Detail
Alliance Variant
Chr2:24237835 Il1rn Intron
Rr552853 138 bp distal
SNP C/T T T T T T T T T T T T T T C
rs8247993
MGI SNP Detail
Alliance Variant
Chr2:24237876 Il1rn Intron
Rr552853 179 bp distal
SNP C/T T T T T T T T T C T T T T C
rs8247994
MGI SNP Detail
Alliance Variant
Chr2:24237932 Il1rn Intron
Rr552853 235 bp distal
SNP C/G C C C C C C C C C C C C C G
rs8248010
MGI SNP Detail
Alliance Variant
Chr2:24238042 Il1rn Intron
Rr552853 345 bp distal
SNP A/G G G G G G G G G G A
rs8248011
MGI SNP Detail
Alliance Variant
Chr2:24238147 Il1rn Intron
Rr552853 450 bp distal
SNP A/G G G G G G G G G G A
rs8248012
MGI SNP Detail
Alliance Variant
Chr2:24238203 Il1rn Intron
Rr552853 506 bp distal
SNP A/G G G G G G G G G G A
rs8248013
MGI SNP Detail
Alliance Variant
Chr2:24238207 Il1rn Intron
Rr552853 510 bp distal
SNP G/T G G G G G G G G G T
rs248840927
MGI SNP Detail
Alliance Variant
Chr2:24238222 Il1rn Intron
Rr552853 525 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8248014
MGI SNP Detail
Alliance Variant
Chr2:24238245 Il1rn Intron
Rr552853 548 bp distal
SNP G/T T T T T T T T T T G
rs8248015
MGI SNP Detail
Alliance Variant
Chr2:24238296 Il1rn Intron
Rr552853 599 bp distal
SNP C/T C C C C C C T
rs8248016
MGI SNP Detail
Alliance Variant
Chr2:24238380 Il1rn Intron
Rr552853 683 bp distal
SNP C/T T T T T T T T T T T C T T T T T T T T T C T T
rs8248017
MGI SNP Detail
Alliance Variant
Chr2:24238430 Il1rn Intron
Rr552853 733 bp distal
SNP A/C C C C C C C C C C C C C C A
rs232688110
MGI SNP Detail
Alliance Variant
Chr2:24238468 Il1rn Intron
Rr552853 771 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247026076
MGI SNP Detail
Alliance Variant
Chr2:24238678 Il1rn Intron
Rr552853 981 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266075888
MGI SNP Detail
Alliance Variant
Chr2:24238719 Il1rn Intron
Rr552853 1022 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224063422
MGI SNP Detail
Alliance Variant
Chr2:24238737 Il1rn Intron
Rr552853 1040 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243743543
MGI SNP Detail
Alliance Variant
Chr2:24238779 Il1rn Intron
Rr552853 1082 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213169530
MGI SNP Detail
Alliance Variant
Chr2:24238807 Il1rn Intron
Rr552853 1110 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226115988
MGI SNP Detail
Alliance Variant
Chr2:24238835 Il1rn Intron
Rr552853 1138 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256744835
MGI SNP Detail
Alliance Variant
Chr2:24238840 Il1rn Intron
Rr552853 1143 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216206693
MGI SNP Detail
Alliance Variant
Chr2:24238846 Il1rn Intron
Rr552853 1149 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241140638
MGI SNP Detail
Alliance Variant
Chr2:24238854 Il1rn Intron
Rr552853 1157 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254026880
MGI SNP Detail
Alliance Variant
Chr2:24238864 Il1rn Intron
Rr552853 1167 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580477156
MGI SNP Detail
Alliance Variant
Chr2:24238903 Il1rn Intron
Rr552853 1206 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219298828
MGI SNP Detail
Alliance Variant
Chr2:24238937 Il1rn Intron
Rr552853 1240 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8241311
MGI SNP Detail
Alliance Variant
Chr2:24239082 Il1rn Intron
Rr552853 1385 bp distal
SNP A/G G G G G G G G G G G A
rs8241310
MGI SNP Detail
Alliance Variant
Chr2:24239125 Il1rn Intron
Rr552853 1428 bp distal
SNP C/T C C C C C C C C C C C T
rs8241309
MGI SNP Detail
Alliance Variant
Chr2:24239146 Il1rn Intron
Rr552853 1449 bp distal
SNP A/G A A A A A A A A A A A G
rs8241302
MGI SNP Detail
Alliance Variant
Chr2:24239208 Il1rn Intron
Rr552853 1511 bp distal
SNP A/G A A A A A A A A A A A G
rs8241301
MGI SNP Detail
Alliance Variant
Chr2:24239211 Il1rn Intron
Rr552853 1514 bp distal
SNP C/T T T T T T T T T T T T C
rs27187383
MGI SNP Detail
Alliance Variant
Chr2:24239213 Il1rn Intron
Rr552853 1516 bp distal
SNP A/G A A A A A A G A A A A A A G A
rs8241300
MGI SNP Detail
Alliance Variant
Chr2:24239236 Il1rn Intron
Rr552853 1539 bp distal
SNP A/G A A A A A A A A A A G A A A A A A A G A
rs27187382
MGI SNP Detail
Alliance Variant
Chr2:24239257 Il1rn Intron
Rr552853 1560 bp distal
SNP A/G G G G G G G G G G G G G A G
rs217917461
MGI SNP Detail
Alliance Variant
Chr2:24239344 Il1rn Intron
Rr552853 1647 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237855935
MGI SNP Detail
Alliance Variant
Chr2:24239396 Il1rn Intron
Rr552853 1699 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257011510
MGI SNP Detail
Alliance Variant
Chr2:24239556 Il1rn Coding-NonSynonymous
Rr552853 1859 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226027938
MGI SNP Detail
Alliance Variant
Chr2:24239576 Il1rn Coding-Synonymous
Rr552853 1879 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs8241287
MGI SNP Detail
Alliance Variant
Chr2:24239650 Il1rn mRNA-UTR
Rr552853 1953 bp distal
Tssr22904 within coordinates of
SNP A/C C C C C C C C C C C C C C A
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Showing SNP(s) 1 - 75 of 75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory