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Mouse SNP Summary
Symbol
Name
ID 		Rr553444
regulatory region 553444
MGI:8015576

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218939569
MGI SNP Detail
Alliance Variant		 Chr2:26898087 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1960 bp proximal
 SNP A/T A T
rs236150372
MGI SNP Detail
Alliance Variant		 Chr2:26898122 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1925 bp proximal
 SNP C/T C T
rs225679060
MGI SNP Detail
Alliance Variant		 Chr2:26898137 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1910 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256565515
MGI SNP Detail
Alliance Variant		 Chr2:26898173 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1874 bp proximal
 SNP C/T T C
rs225500805
MGI SNP Detail
Alliance Variant		 Chr2:26898208 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1839 bp proximal
 SNP C/T C T
rs258418462
MGI SNP Detail
Alliance Variant		 Chr2:26898248 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1799 bp proximal
 SNP C/T C T
rs263228626
MGI SNP Detail
Alliance Variant		 Chr2:26898255 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1792 bp proximal
 SNP A/G G A
rs580209671
MGI SNP Detail
Alliance Variant		 Chr2:26898258 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1789 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs226011242
MGI SNP Detail
Alliance Variant		 Chr2:26898266 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1781 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243920879
MGI SNP Detail
Alliance Variant		 Chr2:26898283 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1764 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254662971
MGI SNP Detail
Alliance Variant		 Chr2:26898426 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1621 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235031851
MGI SNP Detail
Alliance Variant		 Chr2:26898455 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1592 bp proximal
 SNP A/G A G
rs254921693
MGI SNP Detail
Alliance Variant		 Chr2:26898480 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1567 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs253925043
MGI SNP Detail
Alliance Variant		 Chr2:26898573 Adamts13 Coding-Synonymous
Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1474 bp proximal
 SNP G/T G T
rs238970071
MGI SNP Detail
Alliance Variant		 Chr2:26898607 Adamts13 Coding-NonSynonymous
Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1440 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257545052
MGI SNP Detail
Alliance Variant		 Chr2:26898815 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1232 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212824078
MGI SNP Detail
Alliance Variant		 Chr2:26898893 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1154 bp proximal
 SNP C/T T C
rs232215006
MGI SNP Detail
Alliance Variant		 Chr2:26898894 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1153 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229836241
MGI SNP Detail
Alliance Variant		 Chr2:26898944 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1103 bp proximal
 SNP A/G A G
rs245607867
MGI SNP Detail
Alliance Variant		 Chr2:26899005 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1042 bp proximal
 SNP C/T T C
rs235860278
MGI SNP Detail
Alliance Variant		 Chr2:26899006 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 1041 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260743312
MGI SNP Detail
Alliance Variant		 Chr2:26899052 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 995 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213492958
MGI SNP Detail
Alliance Variant		 Chr2:26899087 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 960 bp proximal
 SNP A/G A G
rs583816790
MGI SNP Detail
Alliance Variant		 Chr2:26899147 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 900 bp proximal
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T C T C T C T T C C T T T T T T C T T C T T T C T T T C C
rs238454542
MGI SNP Detail
Alliance Variant		 Chr2:26899158 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 889 bp proximal
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262756410
MGI SNP Detail
Alliance Variant		 Chr2:26899182 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 865 bp proximal
 SNP G/T T G
rs226340876
MGI SNP Detail
Alliance Variant		 Chr2:26899252 Adamts13 Intron
Adamts13 Noncoding-Transcript-Variant
Rr553444 795 bp proximal
 SNP A/G A G
rs237588031
MGI SNP Detail
Alliance Variant		 Chr2:26899316 Adamts13 Coding-NonSynonymous
Adamts13 Noncoding-Transcript-Variant
Rr553444 731 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254599228
MGI SNP Detail
Alliance Variant		 Chr2:26899333 Adamts13 Coding-NonSynonymous
Adamts13 Coding-Synonymous
Adamts13 Noncoding-Transcript-Variant
Rr553444 714 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227797047
MGI SNP Detail
Alliance Variant		 Chr2:26899383 Adamts13 Coding-NonSynonymous
Adamts13 mRNA-UTR
Adamts13 Noncoding-Transcript-Variant
Rr553444 664 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A C
rs260244705
MGI SNP Detail
Alliance Variant		 Chr2:26899400 Adamts13 Coding-NonSynonymous
Adamts13 mRNA-UTR
Adamts13 Noncoding-Transcript-Variant
Rr553444 647 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G C G G C C
rs264112670
MGI SNP Detail
Alliance Variant		 Chr2:26899420 Adamts13 Coding-Synonymous
Adamts13 mRNA-UTR
Adamts13 Noncoding-Transcript-Variant
Rr553444 627 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs241674385
MGI SNP Detail
Alliance Variant		 Chr2:26899429 Adamts13 Coding-Synonymous
Adamts13 mRNA-UTR
Adamts13 Noncoding-Transcript-Variant
Rr553444 618 bp proximal
 SNP A/G G A
rs233283033
MGI SNP Detail
Alliance Variant		 Chr2:26899514 Adamts13 mRNA-UTR
Rr553443 within coordinates of
Rr553444 533 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs252915358
MGI SNP Detail
Alliance Variant		 Chr2:26899544 Adamts13 mRNA-UTR
Rr553443 within coordinates of
Rr553444 503 bp proximal
 SNP C/T T C
rs218999622
MGI SNP Detail
Alliance Variant		 Chr2:26899557 Adamts13 mRNA-UTR
Rr553443 within coordinates of
Rr553444 490 bp proximal
 SNP A/G G A
rs226029302
MGI SNP Detail
Alliance Variant		 Chr2:26899639 Adamts13 mRNA-UTR
Rr553443 within coordinates of
Rr553444 408 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T
rs244656694
MGI SNP Detail		 Chr2:26899651 Rr553443 within coordinates of
Rr553444 396 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T T
rs212710276
MGI SNP Detail		 Chr2:26899661 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 386 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234331639
MGI SNP Detail		 Chr2:26899662 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 385 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264007707
MGI SNP Detail		 Chr2:26899673 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 374 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236216926
MGI SNP Detail		 Chr2:26899718 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 329 bp proximal
 SNP C/T T C
rs240664792
MGI SNP Detail		 Chr2:26899777 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 270 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs251007564
MGI SNP Detail		 Chr2:26899778 Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 269 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219973290
MGI SNP Detail		 Chr2:26899798 Cpgi11365 within coordinates of
Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 249 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256633390
MGI SNP Detail
Alliance Variant		 Chr2:26899887 Cacfd1 mRNA-UTR
Cpgi11365 within coordinates of
Rr396834 within coordinates of
Rr553443 within coordinates of
Rr553444 160 bp proximal
 SNP C/T C T
rs248906332
MGI SNP Detail
Alliance Variant		 Chr2:26899996 Cacfd1 mRNA-UTR
Cpgi11365 within coordinates of
Rr553444 51 bp proximal
Tssr16834 within coordinates of
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T C T C T T T C C T T T T T T C T T C T T T C C T T C
rs222436551
MGI SNP Detail
Alliance Variant		 Chr2:26900032 Cacfd1 Coding-Synonymous
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 15 bp proximal
 SNP C/G G C
rs246642248
MGI SNP Detail
Alliance Variant		 Chr2:26900102 Cacfd1 Coding-NonSynonymous
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 34 bp distal
Rr553445 within coordinates of
 SNP A/G G A
rs248438814
MGI SNP Detail
Alliance Variant		 Chr2:26900104 Cacfd1 Coding-NonSynonymous
Cacfd1 Coding-Synonymous
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 36 bp distal
Rr553445 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265935661
MGI SNP Detail
Alliance Variant		 Chr2:26900220 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 152 bp distal
Rr553446 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs232436751
MGI SNP Detail
Alliance Variant		 Chr2:26900279 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 211 bp distal
Rr553446 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240718871
MGI SNP Detail
Alliance Variant		 Chr2:26900282 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 214 bp distal
Rr553446 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258502573
MGI SNP Detail
Alliance Variant		 Chr2:26900297 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 229 bp distal
Rr553446 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226091276
MGI SNP Detail
Alliance Variant		 Chr2:26900382 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 314 bp distal
Rr553446 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244503296
MGI SNP Detail
Alliance Variant		 Chr2:26900394 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 326 bp distal
Rr553446 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212399084
MGI SNP Detail
Alliance Variant		 Chr2:26900422 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 354 bp distal
Rr553446 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235697988
MGI SNP Detail
Alliance Variant		 Chr2:26900425 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 357 bp distal
Rr553446 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586331039
MGI SNP Detail
Alliance Variant		 Chr2:26900451 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 383 bp distal
Rr553446 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254404385
MGI SNP Detail
Alliance Variant		 Chr2:26900484 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 416 bp distal
Rr553446 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265545861
MGI SNP Detail
Alliance Variant		 Chr2:26900494 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Cpgi11365 within coordinates of
Rr553444 426 bp distal
Rr553446 within coordinates of
 SNP C/T C T
rs233967707
MGI SNP Detail
Alliance Variant		 Chr2:26900673 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 605 bp distal
Rr553447 within coordinates of
 SNP C/T C T
rs259249515
MGI SNP Detail
Alliance Variant		 Chr2:26900677 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 609 bp distal
Rr553447 within coordinates of
 SNP A/G G A
rs251063729
MGI SNP Detail
Alliance Variant		 Chr2:26900724 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 656 bp distal
Rr553447 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256792147
MGI SNP Detail
Alliance Variant		 Chr2:26900738 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 670 bp distal
Rr553447 within coordinates of
 SNP G/T T G
rs224196589
MGI SNP Detail
Alliance Variant		 Chr2:26900821 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 753 bp distal
Rr553447 within coordinates of
 SNP C/T C T
rs248765702
MGI SNP Detail
Alliance Variant		 Chr2:26900824 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 756 bp distal
Rr553447 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T
rs245668292
MGI SNP Detail
Alliance Variant		 Chr2:26900845 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 777 bp distal
Rr553447 within coordinates of
 SNP A/G A G
rs213548736
MGI SNP Detail
Alliance Variant		 Chr2:26900875 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 807 bp distal
Rr553447 within coordinates of
 SNP C/T T C
rs260218159
MGI SNP Detail
Alliance Variant		 Chr2:26900881 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 813 bp distal
Rr553447 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225361802
MGI SNP Detail
Alliance Variant		 Chr2:26900901 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 833 bp distal
Rr553447 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G C
rs240585056
MGI SNP Detail
Alliance Variant		 Chr2:26900911 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 843 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232893820
MGI SNP Detail
Alliance Variant		 Chr2:26901043 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 975 bp distal
 SNP A/G G A
rs225904358
MGI SNP Detail
Alliance Variant		 Chr2:26901076 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1008 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs238366669
MGI SNP Detail
Alliance Variant		 Chr2:26901078 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1010 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252081224
MGI SNP Detail
Alliance Variant		 Chr2:26901087 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1019 bp distal
 SNP C/T C T
rs234115354
MGI SNP Detail
Alliance Variant		 Chr2:26901097 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1029 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259691641
MGI SNP Detail
Alliance Variant		 Chr2:26901219 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1151 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263817345
MGI SNP Detail
Alliance Variant		 Chr2:26901221 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1153 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227279061
MGI SNP Detail
Alliance Variant		 Chr2:26901248 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1180 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244940186
MGI SNP Detail
Alliance Variant		 Chr2:26901252 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1184 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214205173
MGI SNP Detail
Alliance Variant		 Chr2:26901260 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1192 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231191306
MGI SNP Detail
Alliance Variant		 Chr2:26901262 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1194 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218812858
MGI SNP Detail
Alliance Variant		 Chr2:26901265 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1197 bp distal
 SNP A/G A G
rs212114035
MGI SNP Detail
Alliance Variant		 Chr2:26901275 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1207 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240182136
MGI SNP Detail
Alliance Variant		 Chr2:26901288 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1220 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263756137
MGI SNP Detail
Alliance Variant		 Chr2:26901326 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1258 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs221759214
MGI SNP Detail
Alliance Variant		 Chr2:26901328 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1260 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239203533
MGI SNP Detail
Alliance Variant		 Chr2:26901395 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1327 bp distal
 SNP A/G A G
rs252095309
MGI SNP Detail
Alliance Variant		 Chr2:26901400 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1332 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs248630499
MGI SNP Detail
Alliance Variant		 Chr2:26901448 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1380 bp distal
 SNP A/G A G
rs211698535
MGI SNP Detail
Alliance Variant		 Chr2:26901466 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1398 bp distal
 SNP A/C C A
rs261613213
MGI SNP Detail
Alliance Variant		 Chr2:26901471 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1403 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227554301
MGI SNP Detail
Alliance Variant		 Chr2:26901588 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1520 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247793001
MGI SNP Detail
Alliance Variant		 Chr2:26901597 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1529 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230354902
MGI SNP Detail
Alliance Variant		 Chr2:26901671 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1603 bp distal
 SNP A/G A G
rs580413126
MGI SNP Detail
Alliance Variant		 Chr2:26901679 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1611 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584101101
MGI SNP Detail
Alliance Variant		 Chr2:26901683 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1615 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586117202
MGI SNP Detail
Alliance Variant		 Chr2:26901689 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1621 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227151675
MGI SNP Detail
Alliance Variant		 Chr2:26901694 Cacfd1 Intron
Cacfd1 Noncoding-Transcript-Variant
Rr553444 1626 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory