Mouse SNP Summary
|
Symbol Name ID |
Rr553712
regulatory region 553712 MGI:8015844 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27228845 MGI SNP Detail Alliance Variant |
Chr2:27920156 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | |||||||||||||||||||||||||||||||||||||||||
| rs27228844 MGI SNP Detail Alliance Variant |
Chr2:27920157 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | ||||||||||||||||||||||||||||||||||||||||||
| rs254506941 MGI SNP Detail Alliance Variant |
Chr2:27920187 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs27228843 MGI SNP Detail Alliance Variant |
Chr2:27920198 | Col5a1 Gm13372 Rr553712 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | |||||||||||||||||||||||||||||||||||||||||
| rs27228842 MGI SNP Detail Alliance Variant |
Chr2:27920232 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||||
| rs580032396 MGI SNP Detail Alliance Variant |
Chr2:27920340 | Col5a1 Gm13372 Rr553712 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs264064276 MGI SNP Detail Alliance Variant |
Chr2:27920408 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs27228841 MGI SNP Detail Alliance Variant |
Chr2:27920431 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||||
| rs27228840 MGI SNP Detail Alliance Variant |
Chr2:27920455 | Col5a1 Gm13372 Rr553712 |
SNP | A/C | C | C | C | C | C | C | A | C | C | C | C | A | C | C | C | |||||||||||||||||||||||||||||||||||||||||
| rs27228839 MGI SNP Detail Alliance Variant |
Chr2:27920613 | Col5a1 Gm13372 Rr553712 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | |||||||||||||||||||||||||||||||||||||||||
| rs27228838 MGI SNP Detail Alliance Variant |
Chr2:27920651 | Col5a1 Gm13372 Rr553712 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | C | C | A | C | A | |||||||||||||||||||||||||||||||||||||||||
| rs582593254 MGI SNP Detail Alliance Variant |
Chr2:27920661 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | G | G | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | G | |||
| rs47619967 MGI SNP Detail Alliance Variant |
Chr2:27920698 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | A | A | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A | |||
| rs49589536 MGI SNP Detail Alliance Variant |
Chr2:27920700 | Col5a1 Gm13372 Rr553712 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | C | C | C | C | A | A | A | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | A | |||
| rs234445493 MGI SNP Detail Alliance Variant |
Chr2:27920725 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs48897520 MGI SNP Detail Alliance Variant |
Chr2:27920766 | Col5a1 Gm13372 Rr553712 |
SNP | T | T | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs27228837 MGI SNP Detail Alliance Variant |
Chr2:27920785 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | C | C | T | C | T | ||||||||||||||||||||||||||||||||||||||||
| rs50008345 MGI SNP Detail Alliance Variant |
Chr2:27920794 | Col5a1 Gm13372 Rr553712 |
SNP | G | G | G | G | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs250919739 MGI SNP Detail Alliance Variant |
Chr2:27920873 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs220045096 MGI SNP Detail Alliance Variant |
Chr2:27920989 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs237554576 MGI SNP Detail Alliance Variant |
Chr2:27921005 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs27228836 MGI SNP Detail Alliance Variant |
Chr2:27921022 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | C | T | T | C | C | T | C | T | |||||||||||||||||||||||||||||||||||||||||||||
| rs48011830 MGI SNP Detail Alliance Variant |
Chr2:27921182 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs51593256 MGI SNP Detail Alliance Variant |
Chr2:27921261 | Col5a1 Gm13372 Rr553712 |
SNP | G | G | G | G | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs265963309 MGI SNP Detail Alliance Variant |
Chr2:27921324 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs232528778 MGI SNP Detail Alliance Variant |
Chr2:27921457 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs240625662 MGI SNP Detail Alliance Variant |
Chr2:27921481 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs581758350 MGI SNP Detail Alliance Variant |
Chr2:27921494 | Col5a1 Gm13372 Rr553712 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | C | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs580544816 MGI SNP Detail Alliance Variant |
Chr2:27921500 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs583023288 MGI SNP Detail Alliance Variant |
Chr2:27921504 | Col5a1 Gm13372 Rr553712 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | A | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs258396428 MGI SNP Detail Alliance Variant |
Chr2:27921520 | Col5a1 Gm13372 Rr553712 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | G | C | C | C | C | C | G | G | G | C | C | C | C | G | C | C | C | C | C | C | C | G | C | C | C | G | |||
| rs226191339 MGI SNP Detail Alliance Variant |
Chr2:27921586 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs244579858 MGI SNP Detail Alliance Variant |
Chr2:27921596 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs212299879 MGI SNP Detail Alliance Variant |
Chr2:27921666 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||
| rs235249739 MGI SNP Detail Alliance Variant |
Chr2:27921672 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
| rs254168855 MGI SNP Detail Alliance Variant |
Chr2:27921685 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs217871377 MGI SNP Detail Alliance Variant |
Chr2:27921702 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs233367557 MGI SNP Detail Alliance Variant |
Chr2:27921742 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs250975958 MGI SNP Detail Alliance Variant |
Chr2:27921752 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | ||||
| rs214040268 MGI SNP Detail Alliance Variant |
Chr2:27921769 | Col5a1 Gm13372 Rr553712 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | T | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | ||||
| rs231404996 MGI SNP Detail Alliance Variant |
Chr2:27921772 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs261501159 MGI SNP Detail Alliance Variant |
Chr2:27921835 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | T | T | T | T | G | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs220251533 MGI SNP Detail Alliance Variant |
Chr2:27921837 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs251140243 MGI SNP Detail Alliance Variant |
Chr2:27921845 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs260122846 MGI SNP Detail Alliance Variant |
Chr2:27921873 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs222084858 MGI SNP Detail Alliance Variant |
Chr2:27921967 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs240688396 MGI SNP Detail Alliance Variant |
Chr2:27922002 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |||
| rs258407486 MGI SNP Detail Alliance Variant |
Chr2:27922012 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs225800707 MGI SNP Detail Alliance Variant |
Chr2:27922087 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs238457002 MGI SNP Detail Alliance Variant |
Chr2:27922091 | Col5a1 Gm13372 Rr553711 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs264758751 MGI SNP Detail Alliance Variant |
Chr2:27922130 | Col5a1 Gm13372 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | ||||
| rs234214141 MGI SNP Detail Alliance Variant |
Chr2:27922139 | Col5a1 Gm13372 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs259556828 MGI SNP Detail Alliance Variant |
Chr2:27922147 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs263770113 MGI SNP Detail Alliance Variant |
Chr2:27922322 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs227362158 MGI SNP Detail Alliance Variant |
Chr2:27922428 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs245033179 MGI SNP Detail Alliance Variant |
Chr2:27922433 | Col5a1 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs214104301 MGI SNP Detail Alliance Variant |
Chr2:27922441 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs231108446 MGI SNP Detail Alliance Variant |
Chr2:27922463 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs249544526 MGI SNP Detail Alliance Variant |
Chr2:27922475 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs212249335 MGI SNP Detail Alliance Variant |
Chr2:27922511 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs240277601 MGI SNP Detail Alliance Variant |
Chr2:27922522 | Col5a1 Rr553712 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |||
| rs263705878 MGI SNP Detail Alliance Variant |
Chr2:27922575 | Col5a1 Rr553712 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs221635361 MGI SNP Detail Alliance Variant |
Chr2:27922577 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs234161254 MGI SNP Detail Alliance Variant |
Chr2:27922662 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs13473345 MGI SNP Detail Alliance Variant |
Chr2:27922719 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs219650205 MGI SNP Detail Alliance Variant |
Chr2:27922923 | Col5a1 Rr553712 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs245152469 MGI SNP Detail Alliance Variant |
Chr2:27923065 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | |||
| rs261554537 MGI SNP Detail Alliance Variant |
Chr2:27923073 | Col5a1 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | |||
| rs227679770 MGI SNP Detail Alliance Variant |
Chr2:27923087 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | |||
| rs247883555 MGI SNP Detail Alliance Variant |
Chr2:27923092 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs265788426 MGI SNP Detail Alliance Variant |
Chr2:27923112 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | G | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | G | |||
| rs227054909 MGI SNP Detail Alliance Variant |
Chr2:27923117 | Col5a1 Rr553712 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | A | C | C | C | C | C | A | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs245085436 MGI SNP Detail Alliance Variant |
Chr2:27923120 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs256072754 MGI SNP Detail Alliance Variant |
Chr2:27923123 | Col5a1 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | |||
| rs225019592 MGI SNP Detail Alliance Variant |
Chr2:27923131 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs253636210 MGI SNP Detail Alliance Variant |
Chr2:27923179 | Col5a1 Rr553712 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
| rs211741573 MGI SNP Detail Alliance Variant |
Chr2:27923243 | Col5a1 Rr553712 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs243020803 MGI SNP Detail Alliance Variant |
Chr2:27923245 | Col5a1 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs253851816 MGI SNP Detail Alliance Variant |
Chr2:27923250 | Col5a1 Rr553712 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs215804176 MGI SNP Detail Alliance Variant |
Chr2:27923327 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs233715300 MGI SNP Detail Alliance Variant |
Chr2:27923330 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs251902367 MGI SNP Detail Alliance Variant |
Chr2:27923425 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs219750066 MGI SNP Detail Alliance Variant |
Chr2:27923457 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||||
| rs235587051 MGI SNP Detail Alliance Variant |
Chr2:27923495 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs226742705 MGI SNP Detail Alliance Variant |
Chr2:27923567 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs250668621 MGI SNP Detail Alliance Variant |
Chr2:27923577 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs258470653 MGI SNP Detail Alliance Variant |
Chr2:27923647 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs221072617 MGI SNP Detail Alliance Variant |
Chr2:27923729 | Col5a1 Rr553712 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs238693294 MGI SNP Detail Alliance Variant |
Chr2:27923929 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | |||
| rs255693645 MGI SNP Detail Alliance Variant |
Chr2:27923975 | Col5a1 Rr553712 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | A | A | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | A | |||
| rs229992417 MGI SNP Detail Alliance Variant |
Chr2:27924176 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs241870304 MGI SNP Detail Alliance Variant |
Chr2:27924234 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||
| rs264491987 MGI SNP Detail Alliance Variant |
Chr2:27924336 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs233523706 MGI SNP Detail Alliance Variant |
Chr2:27924379 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs259214996 MGI SNP Detail Alliance Variant |
Chr2:27924402 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | G | G | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | G | |||
| rs215908533 MGI SNP Detail Alliance Variant |
Chr2:27924446 | Col5a1 Rr553712 Rr553713 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs227313653 MGI SNP Detail Alliance Variant |
Chr2:27924492 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs245664563 MGI SNP Detail Alliance Variant |
Chr2:27924494 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs213492701 MGI SNP Detail Alliance Variant |
Chr2:27924505 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs237415131 MGI SNP Detail Alliance Variant |
Chr2:27924562 | Col5a1 Rr553712 Rr553713 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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