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Mouse SNP Summary
Symbol
Name
ID
Rr554218
regulatory region 554218
MGI:8016350

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587230283
MGI SNP Detail
Alliance Variant
Chr2:29994523 Rr554218 1943 bp proximal
Zer1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T
rs581286751
MGI SNP Detail
Alliance Variant
Chr2:29994525 Rr554218 1941 bp proximal
Zer1 Intron
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579219681
MGI SNP Detail
Alliance Variant
Chr2:29994682 Rr554218 1784 bp proximal
Zer1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235331790
MGI SNP Detail
Alliance Variant
Chr2:29994729 Rr554218 1737 bp proximal
Zer1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A A
rs253332366
MGI SNP Detail
Alliance Variant
Chr2:29994737 Rr554218 1729 bp proximal
Zer1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C C
rs223873304
MGI SNP Detail
Alliance Variant
Chr2:29994755 Rr554218 1711 bp proximal
Zer1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239455299
MGI SNP Detail
Alliance Variant
Chr2:29994810 Rr554218 1656 bp proximal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257402949
MGI SNP Detail
Alliance Variant
Chr2:29994812 Rr554218 1654 bp proximal
Zer1 Intron
Zer1 Splice-Site
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221549538
MGI SNP Detail
Alliance Variant
Chr2:29994903 Rr554218 1563 bp proximal
Zer1 Coding-Synonymous
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236195199
MGI SNP Detail
Alliance Variant
Chr2:29994990 Rr554218 1476 bp proximal
Zer1 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260133612
MGI SNP Detail
Alliance Variant
Chr2:29995041 Rr554218 1425 bp proximal
Zer1 Intron
Zer1 Splice-Site
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222117139
MGI SNP Detail
Alliance Variant
Chr2:29995105 Rr554218 1361 bp proximal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240172301
MGI SNP Detail
Alliance Variant
Chr2:29995204 Rr554218 1262 bp proximal
Zer1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs265526101
MGI SNP Detail
Alliance Variant
Chr2:29995225 Rr554218 1241 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230924045
MGI SNP Detail
Alliance Variant
Chr2:29995250 Rr554218 1216 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255332224
MGI SNP Detail
Alliance Variant
Chr2:29995318 Rr554218 1148 bp proximal
Zer1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262374361
MGI SNP Detail
Alliance Variant
Chr2:29995350 Rr554218 1116 bp proximal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581444220
MGI SNP Detail
Alliance Variant
Chr2:29995410 Rr554218 1056 bp proximal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224938175
MGI SNP Detail
Alliance Variant
Chr2:29995580 Rr554218 886 bp proximal
Zer1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243437182
MGI SNP Detail
Alliance Variant
Chr2:29995629 Rr554218 837 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217273019
MGI SNP Detail
Alliance Variant
Chr2:29995727 Rr554218 739 bp proximal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252874567
MGI SNP Detail
Alliance Variant
Chr2:29995825 Rr554218 641 bp proximal
Zer1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215774325
MGI SNP Detail
Alliance Variant
Chr2:29995860 Rr554218 606 bp proximal
Zer1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236712663
MGI SNP Detail
Alliance Variant
Chr2:29995923 Rr554218 543 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27179910
MGI SNP Detail
Alliance Variant
Chr2:29995926 Rr554218 540 bp proximal
Zer1 Intron
SNP A/T A A A A A A T A A A T A A T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213268477
MGI SNP Detail
Alliance Variant
Chr2:29995962 Rr554218 504 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27179909
MGI SNP Detail
Alliance Variant
Chr2:29995967 Rr554218 499 bp proximal
Zer1 Intron
SNP A/C C C C C C C A C C C C C C C C
rs253446641
MGI SNP Detail
Alliance Variant
Chr2:29996024 Rr554218 442 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222153072
MGI SNP Detail
Alliance Variant
Chr2:29996049 Rr554218 417 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240211287
MGI SNP Detail
Alliance Variant
Chr2:29996076 Rr554218 390 bp proximal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258860142
MGI SNP Detail
Alliance Variant
Chr2:29996156 Rr554218 310 bp proximal
Zer1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs223336718
MGI SNP Detail
Alliance Variant
Chr2:29996372 Rr554218 94 bp proximal
Zer1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs243269677
MGI SNP Detail
Alliance Variant
Chr2:29996419 Rr554218 47 bp proximal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264874810
MGI SNP Detail
Alliance Variant
Chr2:29996498 Rr554218 within coordinates of
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224973794
MGI SNP Detail
Alliance Variant
Chr2:29996611 Rr554218 within coordinates of
Zer1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs237137040
MGI SNP Detail
Alliance Variant
Chr2:29996677 Rr554218 within coordinates of
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27179908
MGI SNP Detail
Alliance Variant
Chr2:29996843 Rr554218 32 bp distal
Zer1 Intron
Zer1 mRNA-UTR
SNP A/G A A A A A A G A A A A A A A A
rs228450722
MGI SNP Detail
Alliance Variant
Chr2:29996890 Rr554218 79 bp distal
Zer1 Intron
Zer1 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258085381
MGI SNP Detail
Alliance Variant
Chr2:29996926 Rr554218 115 bp distal
Zer1 Coding-NonSynonymous
Zer1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A G G A A A A A A G A A A G A A A G A G A G
rs215460059
MGI SNP Detail
Alliance Variant
Chr2:29997130 Rr554218 319 bp distal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230887128
MGI SNP Detail
Alliance Variant
Chr2:29997174 Rr554218 363 bp distal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250402721
MGI SNP Detail
Alliance Variant
Chr2:29997193 Rr554218 382 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs212525318
MGI SNP Detail
Alliance Variant
Chr2:29997251 Rr554218 440 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27179907
MGI SNP Detail
Alliance Variant
Chr2:29997301 Rr554218 490 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A T A A T A
rs253478278
MGI SNP Detail
Alliance Variant
Chr2:29997325 Rr554218 514 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs217003588
MGI SNP Detail
Alliance Variant
Chr2:29997399 Rr554218 588 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584362382
MGI SNP Detail
Alliance Variant
Chr2:29997430 Rr554218 619 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233849026
MGI SNP Detail
Alliance Variant
Chr2:29997475 Rr554218 664 bp distal
Zer1 Intron
Zer1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27179906
MGI SNP Detail
Alliance Variant
Chr2:29997621 Rr554218 810 bp distal
Zer1 Coding-Synonymous
Zer1 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A A A A A
rs27179905
MGI SNP Detail
Alliance Variant
Chr2:29997745 Rr554218 934 bp distal
Zer1 Intron
SNP A/G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223682146
MGI SNP Detail
Alliance Variant
Chr2:29997760 Rr554218 949 bp distal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246130665
MGI SNP Detail
Alliance Variant
Chr2:29997873 Rr554218 1062 bp distal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256371122
MGI SNP Detail
Alliance Variant
Chr2:29997972 Rr554218 1161 bp distal
Zer1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218186126
MGI SNP Detail
Alliance Variant
Chr2:29998470 Rr554218 1659 bp distal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237175424
MGI SNP Detail
Alliance Variant
Chr2:29998506 Rr554218 1695 bp distal
Zer1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261289656
MGI SNP Detail
Alliance Variant
Chr2:29998547 Rr554218 1736 bp distal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228527289
MGI SNP Detail
Alliance Variant
Chr2:29998551 Rr554218 1740 bp distal
Zer1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246301003
MGI SNP Detail
Alliance Variant
Chr2:29998635 Rr554218 1824 bp distal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265464916
MGI SNP Detail
Alliance Variant
Chr2:29998638 Rr554218 1827 bp distal
Zer1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230708938
MGI SNP Detail
Alliance Variant
Chr2:29998710 Rr554218 1899 bp distal
Zer1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254911195
MGI SNP Detail
Alliance Variant
Chr2:29998758 Rr554218 1947 bp distal
Zer1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254331284
MGI SNP Detail
Alliance Variant
Chr2:29998775 Rr554218 1964 bp distal
Zer1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223239218
MGI SNP Detail
Alliance Variant
Chr2:29998777 Rr554218 1966 bp distal
Zer1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247121835
MGI SNP Detail
Alliance Variant
Chr2:29998781 Rr554218 1970 bp distal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs217033522
MGI SNP Detail
Alliance Variant
Chr2:29998796 Rr554218 1985 bp distal
Zer1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 65 of 65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory