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Mouse SNP Summary
Symbol
Name
ID
Rr554280
regulatory region 554280
MGI:8016412

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247275047
MGI SNP Detail
Alliance Variant
Chr2:30180170 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1952 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs258737626
MGI SNP Detail
Alliance Variant
Chr2:30180193 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1929 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227390572
MGI SNP Detail
Alliance Variant
Chr2:30180265 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1857 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256942903
MGI SNP Detail
Alliance Variant
Chr2:30180307 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1815 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs214435772
MGI SNP Detail
Alliance Variant
Chr2:30180322 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1800 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs237648838
MGI SNP Detail
Alliance Variant
Chr2:30180362 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1760 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs250271192
MGI SNP Detail
Alliance Variant
Chr2:30180392 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1730 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212402927
MGI SNP Detail
Alliance Variant
Chr2:30180394 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1728 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254680510
MGI SNP Detail
Alliance Variant
Chr2:30180412 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1710 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222118402
MGI SNP Detail
Alliance Variant
Chr2:30180424 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1698 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238089204
MGI SNP Detail
Alliance Variant
Chr2:30180480 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1642 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs262541071
MGI SNP Detail
Alliance Variant
Chr2:30180521 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1601 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222690011
MGI SNP Detail
Alliance Variant
Chr2:30180557 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1565 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245065470
MGI SNP Detail
Alliance Variant
Chr2:30180601 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1521 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248902824
MGI SNP Detail
Alliance Variant
Chr2:30180603 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1519 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217907230
MGI SNP Detail
Alliance Variant
Chr2:30180637 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1485 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs241518672
MGI SNP Detail
Alliance Variant
Chr2:30180640 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1482 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258893299
MGI SNP Detail
Alliance Variant
Chr2:30180657 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1465 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs232924807
MGI SNP Detail
Alliance Variant
Chr2:30180671 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1451 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs244978851
MGI SNP Detail
Alliance Variant
Chr2:30180673 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1449 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265212535
MGI SNP Detail
Alliance Variant
Chr2:30180684 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1438 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs229459674
MGI SNP Detail
Alliance Variant
Chr2:30180730 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1392 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243942943
MGI SNP Detail
Alliance Variant
Chr2:30180780 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1342 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212466367
MGI SNP Detail
Alliance Variant
Chr2:30180799 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1323 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229586601
MGI SNP Detail
Alliance Variant
Chr2:30180819 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1303 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248361065
MGI SNP Detail
Alliance Variant
Chr2:30180862 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1260 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216226314
MGI SNP Detail
Alliance Variant
Chr2:30180905 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1217 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240308431
MGI SNP Detail
Alliance Variant
Chr2:30180935 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1187 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs258037139
MGI SNP Detail
Alliance Variant
Chr2:30180980 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1142 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214351516
MGI SNP Detail
Alliance Variant
Chr2:30181028 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1094 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs580292340
MGI SNP Detail
Alliance Variant
Chr2:30181195 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 927 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248260035
MGI SNP Detail
Alliance Variant
Chr2:30181248 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 874 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C
rs222755819
MGI SNP Detail
Alliance Variant
Chr2:30181249 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 873 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G C G G G G G G C G G G G G G G G G G G
rs241574106
MGI SNP Detail
Alliance Variant
Chr2:30181250 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 872 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A
rs581566672
MGI SNP Detail
Alliance Variant
Chr2:30181275 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 847 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252612181
MGI SNP Detail
Alliance Variant
Chr2:30181370 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 752 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583043686
MGI SNP Detail
Alliance Variant
Chr2:30181378 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 744 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586603525
MGI SNP Detail
Alliance Variant
Chr2:30181496 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 626 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs581038287
MGI SNP Detail
Alliance Variant
Chr2:30181513 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 609 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs584612521
MGI SNP Detail
Alliance Variant
Chr2:30181517 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 605 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C
rs578603571
MGI SNP Detail
Alliance Variant
Chr2:30181522 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 600 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581390884
MGI SNP Detail
Alliance Variant
Chr2:30181534 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 588 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584805073
MGI SNP Detail
Alliance Variant
Chr2:30181536 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 586 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579440739
MGI SNP Detail
Alliance Variant
Chr2:30181544 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 578 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224858402
MGI SNP Detail
Alliance Variant
Chr2:30181558 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 564 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582758778
MGI SNP Detail
Alliance Variant
Chr2:30181559 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 563 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578348325
MGI SNP Detail
Alliance Variant
Chr2:30181633 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 489 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247605290
MGI SNP Detail
Alliance Variant
Chr2:30181644 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 478 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262674173
MGI SNP Detail
Alliance Variant
Chr2:30181656 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 466 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229905633
MGI SNP Detail
Alliance Variant
Chr2:30181685 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 437 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237816164
MGI SNP Detail
Alliance Variant
Chr2:30181695 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 427 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255758893
MGI SNP Detail
Alliance Variant
Chr2:30181699 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 423 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581702775
MGI SNP Detail
Alliance Variant
Chr2:30181848 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 274 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs228930536
MGI SNP Detail
Alliance Variant
Chr2:30181865 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 257 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs248415779
MGI SNP Detail
Alliance Variant
Chr2:30181883 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 239 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27209186
MGI SNP Detail
Alliance Variant
Chr2:30181892 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 230 bp proximal
SNP G/T T T T T T T T T T G T T G T
rs231912123
MGI SNP Detail
Alliance Variant
Chr2:30181914 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 208 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256558336
MGI SNP Detail
Alliance Variant
Chr2:30181978 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 144 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs214049357
MGI SNP Detail
Alliance Variant
Chr2:30182108 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 14 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237432234
MGI SNP Detail
Alliance Variant
Chr2:30182119 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 3 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248323967
MGI SNP Detail
Alliance Variant
Chr2:30182140 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217406930
MGI SNP Detail
Alliance Variant
Chr2:30182141 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234341781
MGI SNP Detail
Alliance Variant
Chr2:30182146 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 3 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252619935
MGI SNP Detail
Alliance Variant
Chr2:30182231 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 88 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225126929
MGI SNP Detail
Alliance Variant
Chr2:30182242 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 99 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237775551
MGI SNP Detail
Alliance Variant
Chr2:30182247 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 104 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262397978
MGI SNP Detail
Alliance Variant
Chr2:30182253 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 110 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222427946
MGI SNP Detail
Alliance Variant
Chr2:30182280 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 137 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237880682
MGI SNP Detail
Alliance Variant
Chr2:30182281 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 138 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255814029
MGI SNP Detail
Alliance Variant
Chr2:30182288 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 145 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223165353
MGI SNP Detail
Alliance Variant
Chr2:30182307 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 164 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241663665
MGI SNP Detail
Alliance Variant
Chr2:30182311 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 168 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263825153
MGI SNP Detail
Alliance Variant
Chr2:30182326 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 183 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232539904
MGI SNP Detail
Alliance Variant
Chr2:30182358 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 215 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs251859283
MGI SNP Detail
Alliance Variant
Chr2:30182428 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 285 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265156008
MGI SNP Detail
Alliance Variant
Chr2:30182522 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 379 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs224702157
MGI SNP Detail
Alliance Variant
Chr2:30182549 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 406 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242485591
MGI SNP Detail
Alliance Variant
Chr2:30182651 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 508 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217415271
MGI SNP Detail
Alliance Variant
Chr2:30182662 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 519 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs234445013
MGI SNP Detail
Alliance Variant
Chr2:30182872 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 729 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs258310969
MGI SNP Detail
Alliance Variant
Chr2:30182902 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 759 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215795546
MGI SNP Detail
Alliance Variant
Chr2:30182915 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 772 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239976894
MGI SNP Detail
Alliance Variant
Chr2:30182980 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 837 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257829818
MGI SNP Detail
Alliance Variant
Chr2:30183017 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 874 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs222010158
MGI SNP Detail
Alliance Variant
Chr2:30183102 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 959 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230440770
MGI SNP Detail
Alliance Variant
Chr2:30183103 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 960 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249387016
MGI SNP Detail
Alliance Variant
Chr2:30183114 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 971 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs223229942
MGI SNP Detail
Alliance Variant
Chr2:30183121 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 978 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs241722061
MGI SNP Detail
Alliance Variant
Chr2:30183220 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1077 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265636007
MGI SNP Detail
Alliance Variant
Chr2:30183322 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1179 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs223894771
MGI SNP Detail
Alliance Variant
Chr2:30183393 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1250 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247361212
MGI SNP Detail
Alliance Variant
Chr2:30183512 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1369 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262541464
MGI SNP Detail
Alliance Variant
Chr2:30183561 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1418 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224713997
MGI SNP Detail
Alliance Variant
Chr2:30183724 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1581 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs242543186
MGI SNP Detail
Alliance Variant
Chr2:30183725 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1582 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs260071935
MGI SNP Detail
Alliance Variant
Chr2:30183764 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1621 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs228683313
MGI SNP Detail
Alliance Variant
Chr2:30183779 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1636 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T
rs253314974
MGI SNP Detail
Alliance Variant
Chr2:30183784 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1641 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T A T T T T T T A T T T T T T T T T T T
rs585833076
MGI SNP Detail
Alliance Variant
Chr2:30183795 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1652 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579812670
MGI SNP Detail
Alliance Variant
Chr2:30183820 Nup188 Intron
Nup188 Noncoding-Transcript-Variant
Rr554280 1677 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 100 of 104

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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