About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr554368
regulatory region 554368
MGI:8016500

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 110

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233204247
MGI SNP Detail
Alliance Variant		 Chr2:30493454 Cstad Intron
Rr554368 1990 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258328042
MGI SNP Detail
Alliance Variant		 Chr2:30493455 Cstad Intron
Rr554368 1989 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582567267
MGI SNP Detail
Alliance Variant		 Chr2:30493462 Cstad Intron
Rr554368 1982 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs216706645
MGI SNP Detail
Alliance Variant		 Chr2:30493593 Cstad Intron
Rr554368 1851 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239935038
MGI SNP Detail
Alliance Variant		 Chr2:30493601 Cstad Intron
Rr554368 1843 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245670094
MGI SNP Detail
Alliance Variant		 Chr2:30493622 Cstad Intron
Rr554368 1822 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs213542267
MGI SNP Detail
Alliance Variant		 Chr2:30493654 Cstad Intron
Rr554368 1790 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230454568
MGI SNP Detail
Alliance Variant		 Chr2:30493723 Cstad Intron
Rr554368 1721 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249405377
MGI SNP Detail
Alliance Variant		 Chr2:30493761 Cstad Intron
Rr554368 1683 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27176691
MGI SNP Detail
Alliance Variant		 Chr2:30493883 Cstad Intron
Rr554368 1561 bp proximal
 SNP A/G A A A G G
rs27176690
MGI SNP Detail
Alliance Variant		 Chr2:30494103 Cstad Intron
Rr554367 within coordinates of
Rr554368 1341 bp proximal
 SNP C/G C C C G
rs584981068
MGI SNP Detail
Alliance Variant		 Chr2:30494112 Cstad Intron
Rr554367 within coordinates of
Rr554368 1332 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578871275
MGI SNP Detail
Alliance Variant		 Chr2:30494154 Cstad Intron
Rr554367 within coordinates of
Rr554368 1290 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239194503
MGI SNP Detail
Alliance Variant		 Chr2:30494182 Cstad Intron
Rr554367 within coordinates of
Rr554368 1262 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs263158306
MGI SNP Detail
Alliance Variant		 Chr2:30494207 Cstad Intron
Rr554367 within coordinates of
Rr554368 1237 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224607399
MGI SNP Detail
Alliance Variant		 Chr2:30494221 Cstad Intron
Rr554367 within coordinates of
Rr554368 1223 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs238763467
MGI SNP Detail
Alliance Variant		 Chr2:30494233 Cstad Intron
Rr554367 within coordinates of
Rr554368 1211 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs255766027
MGI SNP Detail
Alliance Variant		 Chr2:30494320 Cstad Intron
Rr554367 within coordinates of
Rr554368 1124 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs218923349
MGI SNP Detail
Alliance Variant		 Chr2:30494492 Cstad Intron
Rr554368 952 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236122310
MGI SNP Detail
Alliance Variant		 Chr2:30494549 Cstad Intron
Rr554368 895 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264522746
MGI SNP Detail
Alliance Variant		 Chr2:30494616 Cstad Intron
Rr554368 828 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234279573
MGI SNP Detail
Alliance Variant		 Chr2:30494641 Cstad Intron
Rr554368 803 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs253282640
MGI SNP Detail
Alliance Variant		 Chr2:30494676 Cstad Intron
Rr554368 768 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265524855
MGI SNP Detail
Alliance Variant		 Chr2:30494838 Cstad Intron
Rr554368 606 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A
rs230930817
MGI SNP Detail
Alliance Variant		 Chr2:30494841 Cstad Intron
Rr554368 603 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582895010
MGI SNP Detail
Alliance Variant		 Chr2:30494851 Cstad Intron
Rr554368 593 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245725252
MGI SNP Detail
Alliance Variant		 Chr2:30494919 Cstad Intron
Rr554368 525 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213597605
MGI SNP Detail
Alliance Variant		 Chr2:30494921 Cstad Intron
Rr554368 523 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs230512036
MGI SNP Detail
Alliance Variant		 Chr2:30494947 Cstad Intron
Rr554368 497 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243398749
MGI SNP Detail
Alliance Variant		 Chr2:30495203 Cstad Intron
Rr554368 241 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218922685
MGI SNP Detail
Alliance Variant		 Chr2:30495254 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 190 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586241810
MGI SNP Detail
Alliance Variant		 Chr2:30495257 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 187 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241807536
MGI SNP Detail
Alliance Variant		 Chr2:30495265 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 179 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs259142241
MGI SNP Detail
Alliance Variant		 Chr2:30495269 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 175 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223785814
MGI SNP Detail
Alliance Variant		 Chr2:30495281 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 163 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231810013
MGI SNP Detail
Alliance Variant		 Chr2:30495285 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 159 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250103277
MGI SNP Detail
Alliance Variant		 Chr2:30495388 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 56 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218983168
MGI SNP Detail
Alliance Variant		 Chr2:30495403 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 41 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236194928
MGI SNP Detail
Alliance Variant		 Chr2:30495442 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 2 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs264369513
MGI SNP Detail
Alliance Variant		 Chr2:30495471 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226024472
MGI SNP Detail
Alliance Variant		 Chr2:30495493 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs249344927
MGI SNP Detail
Alliance Variant		 Chr2:30495507 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs263251522
MGI SNP Detail
Alliance Variant		 Chr2:30495508 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs226651905
MGI SNP Detail
Alliance Variant		 Chr2:30495512 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs579692549
MGI SNP Detail
Alliance Variant		 Chr2:30495515 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs238932503
MGI SNP Detail
Alliance Variant		 Chr2:30495523 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs257553527
MGI SNP Detail
Alliance Variant		 Chr2:30495526 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224944243
MGI SNP Detail
Alliance Variant		 Chr2:30495572 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs249080236
MGI SNP Detail
Alliance Variant		 Chr2:30495624 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218947570
MGI SNP Detail
Alliance Variant		 Chr2:30495626 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232962633
MGI SNP Detail
Alliance Variant		 Chr2:30495634 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257981226
MGI SNP Detail
Alliance Variant		 Chr2:30495708 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs215375528
MGI SNP Detail
Alliance Variant		 Chr2:30495718 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231870384
MGI SNP Detail
Alliance Variant		 Chr2:30495802 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249363827
MGI SNP Detail
Alliance Variant		 Chr2:30495836 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs581754741
MGI SNP Detail
Alliance Variant		 Chr2:30495839 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs213305653
MGI SNP Detail
Alliance Variant		 Chr2:30495840 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C A C C C C
rs230340422
MGI SNP Detail
Alliance Variant		 Chr2:30495841 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs228374795
MGI SNP Detail
Alliance Variant		 Chr2:30495881 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP G G G
rs226538117
MGI SNP Detail
Alliance Variant		 Chr2:30495892 Cstad Intron
Cstad Noncoding-Transcript-Variant
Rr554368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246703909
MGI SNP Detail
Alliance Variant		 Chr2:30495943 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs263014500
MGI SNP Detail
Alliance Variant		 Chr2:30495971 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 27 bp distal
Rr554369 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220436950
MGI SNP Detail
Alliance Variant		 Chr2:30496043 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 99 bp distal
Rr554369 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs239016442
MGI SNP Detail
Alliance Variant		 Chr2:30496085 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 141 bp distal
Rr554369 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs256845466
MGI SNP Detail
Alliance Variant		 Chr2:30496100 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 156 bp distal
Rr554369 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G C G G G
rs585843895
MGI SNP Detail
Alliance Variant		 Chr2:30496121 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 177 bp distal
Rr554369 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583378785
MGI SNP Detail
Alliance Variant		 Chr2:30496122 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 178 bp distal
Rr554369 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587378371
MGI SNP Detail
Alliance Variant		 Chr2:30496126 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 182 bp distal
Rr554369 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs224238280
MGI SNP Detail
Alliance Variant		 Chr2:30496129 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 185 bp distal
Rr554369 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243991268
MGI SNP Detail
Alliance Variant		 Chr2:30496145 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 201 bp distal
Rr554369 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs264396052
MGI SNP Detail
Alliance Variant		 Chr2:30496201 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 257 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs233946739
MGI SNP Detail
Alliance Variant		 Chr2:30496269 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 325 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs253015882
MGI SNP Detail
Alliance Variant		 Chr2:30496274 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 330 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215007785
MGI SNP Detail
Alliance Variant		 Chr2:30496282 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 338 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225882480
MGI SNP Detail
Alliance Variant		 Chr2:30496324 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 380 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243568942
MGI SNP Detail
Alliance Variant		 Chr2:30496333 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 389 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs212572813
MGI SNP Detail
Alliance Variant		 Chr2:30496375 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 431 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234293126
MGI SNP Detail
Alliance Variant		 Chr2:30496408 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 464 bp distal
Rr554370 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264440710
MGI SNP Detail
Alliance Variant		 Chr2:30496420 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 476 bp distal
Rr554370 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218545391
MGI SNP Detail
Alliance Variant		 Chr2:30496421 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 477 bp distal
Rr554370 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241488483
MGI SNP Detail
Alliance Variant		 Chr2:30496422 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 478 bp distal
Rr554370 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258907382
MGI SNP Detail
Alliance Variant		 Chr2:30496478 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 534 bp distal
Rr554370 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220491105
MGI SNP Detail
Alliance Variant		 Chr2:30496544 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 600 bp distal
Rr554370 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs231982844
MGI SNP Detail
Alliance Variant		 Chr2:30496556 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 612 bp distal
Rr554370 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs250574272
MGI SNP Detail
Alliance Variant		 Chr2:30496645 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 701 bp distal
Rr554370 within coordinates of
Rr554371 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218233665
MGI SNP Detail
Alliance Variant		 Chr2:30496654 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 710 bp distal
Rr554370 within coordinates of
Rr554371 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248379994
MGI SNP Detail
Alliance Variant		 Chr2:30496655 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 711 bp distal
Rr554370 within coordinates of
Rr554371 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs266139704
MGI SNP Detail
Alliance Variant		 Chr2:30497076 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1132 bp distal
Rr554370 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs225716414
MGI SNP Detail
Alliance Variant		 Chr2:30497151 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1207 bp distal
Rr554370 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs248831538
MGI SNP Detail
Alliance Variant		 Chr2:30497179 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1235 bp distal
Rr554370 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257088820
MGI SNP Detail
Alliance Variant		 Chr2:30497293 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1349 bp distal
Rr554370 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225915941
MGI SNP Detail
Alliance Variant		 Chr2:30497367 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1423 bp distal
Rr554370 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs243626424
MGI SNP Detail
Alliance Variant		 Chr2:30497424 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1480 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs254411599
MGI SNP Detail
Alliance Variant		 Chr2:30497438 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1494 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227775257
MGI SNP Detail
Alliance Variant		 Chr2:30497501 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1557 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254370146
MGI SNP Detail
Alliance Variant		 Chr2:30497553 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1609 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218621961
MGI SNP Detail
Alliance Variant		 Chr2:30497578 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1634 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239062644
MGI SNP Detail
Alliance Variant		 Chr2:30497597 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1653 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs246816945
MGI SNP Detail
Alliance Variant		 Chr2:30497676 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1732 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580062718
MGI SNP Detail
Alliance Variant		 Chr2:30497696 Cstad Intron
Cstad Noncoding-Transcript-Variant
Gm74685 within coordinates of
Rr554368 1752 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 110
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory