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Mouse SNP Summary
Symbol
Name
ID 		Rr554654
regulatory region 554654
MGI:8016786

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218040404
MGI SNP Detail
Alliance Variant		 Chr2:31385128 Ass1 Intron
Rr554653 within coordinates of
Rr554654 1994 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583934280
MGI SNP Detail
Alliance Variant		 Chr2:31385142 Ass1 Intron
Rr554653 within coordinates of
Rr554654 1980 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239586028
MGI SNP Detail
Alliance Variant		 Chr2:31385951 Ass1 Intron
Rr554654 1171 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258288430
MGI SNP Detail
Alliance Variant		 Chr2:31386098 Ass1 Intron
Rr554654 1024 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs215362573
MGI SNP Detail
Alliance Variant		 Chr2:31386157 Ass1 Intron
Rr554654 965 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233059963
MGI SNP Detail
Alliance Variant		 Chr2:31386182 Ass1 Intron
Rr554654 940 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251510817
MGI SNP Detail
Alliance Variant		 Chr2:31386210 Ass1 Intron
Rr554654 912 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219092331
MGI SNP Detail
Alliance Variant		 Chr2:31386295 Ass1 Intron
Rr554654 827 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs236761447
MGI SNP Detail
Alliance Variant		 Chr2:31386304 Ass1 Intron
Rr554654 818 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261190300
MGI SNP Detail
Alliance Variant		 Chr2:31386340 Ass1 Intron
Rr554654 782 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs226608354
MGI SNP Detail
Alliance Variant		 Chr2:31386349 Ass1 Intron
Rr554654 773 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245968566
MGI SNP Detail
Alliance Variant		 Chr2:31386514 Ass1 Intron
Rr554654 608 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs256849260
MGI SNP Detail
Alliance Variant		 Chr2:31386524 Ass1 Intron
Rr554654 598 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219909230
MGI SNP Detail
Alliance Variant		 Chr2:31386576 Ass1 Intron
Rr554654 546 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237258568
MGI SNP Detail
Alliance Variant		 Chr2:31386665 Ass1 Intron
Rr554654 457 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254541320
MGI SNP Detail
Alliance Variant		 Chr2:31386722 Ass1 Intron
Rr554654 400 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227521101
MGI SNP Detail
Alliance Variant		 Chr2:31386730 Ass1 Intron
Rr554654 392 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259986464
MGI SNP Detail
Alliance Variant		 Chr2:31386736 Ass1 Intron
Rr554654 386 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264010658
MGI SNP Detail
Alliance Variant		 Chr2:31386764 Ass1 Intron
Rr554654 358 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G
rs233011223
MGI SNP Detail
Alliance Variant		 Chr2:31386767 Ass1 Intron
Rr554654 355 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247349436
MGI SNP Detail
Alliance Variant		 Chr2:31386854 Ass1 Intron
Rr554654 268 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs215258130
MGI SNP Detail
Alliance Variant		 Chr2:31386986 Ass1 Intron
Rr554654 136 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233111182
MGI SNP Detail
Alliance Variant		 Chr2:31387231 Ass1 Intron
Rr554654 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245146923
MGI SNP Detail
Alliance Variant		 Chr2:31387313 Ass1 Intron
Rr554654 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213015731
MGI SNP Detail
Alliance Variant		 Chr2:31387439 Ass1 Intron
Rr554654 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234973064
MGI SNP Detail
Alliance Variant		 Chr2:31387441 Ass1 Intron
Rr554654 within coordinates of
 SNP C/T C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C
rs264348170
MGI SNP Detail
Alliance Variant		 Chr2:31387571 Ass1 Intron
Rr554654 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218643465
MGI SNP Detail
Alliance Variant		 Chr2:31387596 Ass1 Intron
Rr554654 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs241558235
MGI SNP Detail
Alliance Variant		 Chr2:31387696 Ass1 Intron
Rr554654 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250957345
MGI SNP Detail
Alliance Variant		 Chr2:31387787 Ass1 Intron
Rr554654 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs219767794
MGI SNP Detail
Alliance Variant		 Chr2:31387792 Ass1 Intron
Rr554654 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237139037
MGI SNP Detail
Alliance Variant		 Chr2:31387841 Ass1 Intron
Rr554654 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248712470
MGI SNP Detail
Alliance Variant		 Chr2:31387876 Ass1 Intron
Rr554654 25 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219765360
MGI SNP Detail
Alliance Variant		 Chr2:31388020 Ass1 Intron
Rr554654 169 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs580865807
MGI SNP Detail
Alliance Variant		 Chr2:31388062 Ass1 Intron
Rr554654 211 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248217282
MGI SNP Detail
Alliance Variant		 Chr2:31388173 Ass1 Coding-Synonymous
Rr554654 322 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265889281
MGI SNP Detail
Alliance Variant		 Chr2:31388333 Ass1 Intron
Rr554654 482 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232401456
MGI SNP Detail
Alliance Variant		 Chr2:31388372 Ass1 Intron
Rr554654 521 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240484232
MGI SNP Detail
Alliance Variant		 Chr2:31388409 Ass1 Intron
Rr554654 558 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259201337
MGI SNP Detail
Alliance Variant		 Chr2:31388431 Ass1 Intron
Rr554654 580 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs226645290
MGI SNP Detail
Alliance Variant		 Chr2:31388439 Ass1 Intron
Rr554654 588 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245042307
MGI SNP Detail
Alliance Variant		 Chr2:31388585 Ass1 Intron
Rr554654 734 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213011951
MGI SNP Detail
Alliance Variant		 Chr2:31388588 Ass1 Intron
Rr554654 737 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228444019
MGI SNP Detail
Alliance Variant		 Chr2:31388653 Ass1 Intron
Rr554654 802 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs255020628
MGI SNP Detail
Alliance Variant		 Chr2:31388666 Ass1 Intron
Rr554654 815 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs218420364
MGI SNP Detail
Alliance Variant		 Chr2:31388667 Ass1 Intron
Rr554654 816 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233935184
MGI SNP Detail
Alliance Variant		 Chr2:31388678 Ass1 Intron
Rr554654 827 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251577861
MGI SNP Detail
Alliance Variant		 Chr2:31388685 Ass1 Intron
Rr554654 834 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214744151
MGI SNP Detail
Alliance Variant		 Chr2:31388836 Ass1 Intron
Rr554654 985 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231131403
MGI SNP Detail
Alliance Variant		 Chr2:31388841 Ass1 Intron
Rr554654 990 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248590100
MGI SNP Detail
Alliance Variant		 Chr2:31388889 Ass1 Intron
Rr554654 1038 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G G
rs220148487
MGI SNP Detail
Alliance Variant		 Chr2:31388921 Ass1 Intron
Rr554654 1070 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A C A A A A A A A A A A A A A C A A A A
rs585005677
MGI SNP Detail
Alliance Variant		 Chr2:31388936 Ass1 Intron
Rr554654 1085 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250934337
MGI SNP Detail
Alliance Variant		 Chr2:31388968 Ass1 Intron
Rr554654 1117 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260171220
MGI SNP Detail
Alliance Variant		 Chr2:31389128 Ass1 Intron
Rr554654 1277 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225020167
MGI SNP Detail
Alliance Variant		 Chr2:31389217 Ass1 Intron
Rr554654 1366 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240364530
MGI SNP Detail
Alliance Variant		 Chr2:31389221 Ass1 Intron
Rr554654 1370 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258329206
MGI SNP Detail
Alliance Variant		 Chr2:31389246 Ass1 Intron
Rr554654 1395 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225693445
MGI SNP Detail
Alliance Variant		 Chr2:31389250 Ass1 Intron
Rr554654 1399 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239012400
MGI SNP Detail
Alliance Variant		 Chr2:31389734 Ass1 Intron
Rr406727 within coordinates of
Rr554654 1883 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs578974790
MGI SNP Detail
Alliance Variant		 Chr2:31389766 Ass1 Intron
Rr406727 within coordinates of
Rr554654 1915 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 61 of 61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory