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Mouse SNP Summary
Symbol
Name
ID
Rr554792
regulatory region 554792
MGI:8016924

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225724389
MGI SNP Detail
Alliance Variant
Chr2:31967999 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1984 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs241261922
MGI SNP Detail
Alliance Variant
Chr2:31968004 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1979 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259087211
MGI SNP Detail
Alliance Variant
Chr2:31968036 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1947 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220126875
MGI SNP Detail
Alliance Variant
Chr2:31968045 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1938 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238735473
MGI SNP Detail
Alliance Variant
Chr2:31968122 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1861 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262435559
MGI SNP Detail
Alliance Variant
Chr2:31968179 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1804 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27177453
MGI SNP Detail
Alliance Variant
Chr2:31968196 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1787 bp proximal
SNP A/G G G G G G G G G G G G G G A G
rs241271060
MGI SNP Detail
Alliance Variant
Chr2:31968246 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1737 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs266168928
MGI SNP Detail
Alliance Variant
Chr2:31968290 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1693 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228822526
MGI SNP Detail
Alliance Variant
Chr2:31968295 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1688 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246291468
MGI SNP Detail
Alliance Variant
Chr2:31968306 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1677 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215562957
MGI SNP Detail
Alliance Variant
Chr2:31968308 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1675 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226319212
MGI SNP Detail
Alliance Variant
Chr2:31968422 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1561 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A G A G
rs244090993
MGI SNP Detail
Alliance Variant
Chr2:31968552 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554790 within coordinates of
Rr554792 1431 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212600677
MGI SNP Detail
Alliance Variant
Chr2:31968616 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554790 within coordinates of
Rr554792 1367 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236022839
MGI SNP Detail
Alliance Variant
Chr2:31968884 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554790 within coordinates of
Rr554792 1099 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27177452
MGI SNP Detail
Alliance Variant
Chr2:31968928 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554790 within coordinates of
Rr554792 1055 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs27177451
MGI SNP Detail
Alliance Variant
Chr2:31969013 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554792 970 bp proximal
SNP C/T C C C C C C C C C C C C T C
rs234464056
MGI SNP Detail
Alliance Variant
Chr2:31969046 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554792 937 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252754740
MGI SNP Detail
Alliance Variant
Chr2:31969050 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr370574 within coordinates of
Rr554792 933 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G
rs220262707
MGI SNP Detail
Alliance Variant
Chr2:31969066 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 917 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs238725728
MGI SNP Detail
Alliance Variant
Chr2:31969146 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 837 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261479638
MGI SNP Detail
Alliance Variant
Chr2:31969166 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 817 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T C T T T C T T T T
rs48490636
MGI SNP Detail
Alliance Variant
Chr2:31969254 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 729 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs47236323
MGI SNP Detail
Alliance Variant
Chr2:31969264 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 719 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264520594
MGI SNP Detail
Alliance Variant
Chr2:31969274 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 709 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C G C C C C C C C C C C C G C C C C C C C C
rs51764382
MGI SNP Detail
Alliance Variant
Chr2:31969337 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554791 within coordinates of
Rr554792 646 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs49850230
MGI SNP Detail
Alliance Variant
Chr2:31969340 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554791 within coordinates of
Rr554792 643 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs50181645
MGI SNP Detail
Alliance Variant
Chr2:31969585 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 398 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs226484741
MGI SNP Detail
Alliance Variant
Chr2:31970018 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250970810
MGI SNP Detail
Alliance Variant
Chr2:31970056 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213631459
MGI SNP Detail
Alliance Variant
Chr2:31970075 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228033539
MGI SNP Detail
Alliance Variant
Chr2:31970094 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259852368
MGI SNP Detail
Alliance Variant
Chr2:31970133 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs217692658
MGI SNP Detail
Alliance Variant
Chr2:31970149 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214362770
MGI SNP Detail
Alliance Variant
Chr2:31970172 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231736686
MGI SNP Detail
Alliance Variant
Chr2:31970204 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 8 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256123263
MGI SNP Detail
Alliance Variant
Chr2:31970258 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 62 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219915000
MGI SNP Detail
Alliance Variant
Chr2:31970268 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 72 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248222264
MGI SNP Detail
Alliance Variant
Chr2:31970273 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 77 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264295950
MGI SNP Detail
Alliance Variant
Chr2:31970319 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 123 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222101338
MGI SNP Detail
Alliance Variant
Chr2:31970332 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 136 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G G T T T T T T G T T T G T T T G T T T T
rs240105391
MGI SNP Detail
Alliance Variant
Chr2:31970410 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 214 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581224814
MGI SNP Detail
Alliance Variant
Chr2:31970461 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 265 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257361935
MGI SNP Detail
Alliance Variant
Chr2:31970489 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 293 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220352759
MGI SNP Detail
Alliance Variant
Chr2:31970510 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 314 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246360237
MGI SNP Detail
Alliance Variant
Chr2:31970529 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 333 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262158698
MGI SNP Detail
Alliance Variant
Chr2:31970590 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 394 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228552016
MGI SNP Detail
Alliance Variant
Chr2:31970599 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 403 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254973506
MGI SNP Detail
Alliance Variant
Chr2:31970722 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 526 bp distal
Rr554793 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260444155
MGI SNP Detail
Alliance Variant
Chr2:31970754 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 558 bp distal
Rr554793 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227941028
MGI SNP Detail
Alliance Variant
Chr2:31970765 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 569 bp distal
Rr554793 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs246144957
MGI SNP Detail
Alliance Variant
Chr2:31970799 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 603 bp distal
Rr554793 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T A A T T T T T T A T T T A T T T A T A T A
rs214115240
MGI SNP Detail
Alliance Variant
Chr2:31970847 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 651 bp distal
Rr554793 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C A C C C C C C C C C C C A C C C C C C C C
rs235892694
MGI SNP Detail
Alliance Variant
Chr2:31970947 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 751 bp distal
Rr554793 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254110546
MGI SNP Detail
Alliance Variant
Chr2:31971150 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 954 bp distal
Rr554793 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A C A A A A A A A A A A A C A A A A A A A A
rs212032143
MGI SNP Detail
Alliance Variant
Chr2:31971262 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr396884 within coordinates of
Rr554792 1066 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584951271
MGI SNP Detail
Alliance Variant
Chr2:31971360 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr396884 within coordinates of
Rr554792 1164 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G T G G G G G G G G G G G G
rs242850693
MGI SNP Detail
Alliance Variant
Chr2:31971591 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1395 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260190499
MGI SNP Detail
Alliance Variant
Chr2:31971627 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1431 bp distal
Tssr17242 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222091428
MGI SNP Detail
Alliance Variant
Chr2:31971674 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1478 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233761412
MGI SNP Detail
Alliance Variant
Chr2:31971725 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1529 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs251277141
MGI SNP Detail
Alliance Variant
Chr2:31971731 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1535 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs220058877
MGI SNP Detail
Alliance Variant
Chr2:31971795 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1599 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243244130
MGI SNP Detail
Alliance Variant
Chr2:31971837 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1641 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264946040
MGI SNP Detail
Alliance Variant
Chr2:31971904 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1708 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A A A A A A A G A A A A A A A A
rs587432332
MGI SNP Detail
Alliance Variant
Chr2:31971930 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1734 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220979101
MGI SNP Detail
Alliance Variant
Chr2:31972011 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1815 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251730590
MGI SNP Detail
Alliance Variant
Chr2:31972023 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1827 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260882169
MGI SNP Detail
Alliance Variant
Chr2:31972066 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1870 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227888295
MGI SNP Detail
Alliance Variant
Chr2:31972068 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1872 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246220001
MGI SNP Detail
Alliance Variant
Chr2:31972093 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1897 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258136971
MGI SNP Detail
Alliance Variant
Chr2:31972122 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1926 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229753203
MGI SNP Detail
Alliance Variant
Chr2:31972132 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1936 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249567815
MGI SNP Detail
Alliance Variant
Chr2:31972136 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1940 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212210310
MGI SNP Detail
Alliance Variant
Chr2:31972167 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1971 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580774096
MGI SNP Detail
Alliance Variant
Chr2:31972184 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1988 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs584342160
MGI SNP Detail
Alliance Variant
Chr2:31972186 Fam78a Intron
Fam78a Noncoding-Transcript-Variant
Rr554792 1990 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 78 of 78

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory