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Mouse SNP Summary
Symbol
Name
ID
Rr555443
regulatory region 555443
MGI:8017575

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Showing SNP(s) 1 - 33 of 33

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225677966
MGI SNP Detail
Alliance Variant
Chr2:34144365 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1697 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs243432721
MGI SNP Detail
Alliance Variant
Chr2:34144676 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1386 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs586480197
MGI SNP Detail
Alliance Variant
Chr2:34144730 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1332 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254115261
MGI SNP Detail
Alliance Variant
Chr2:34144889 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1173 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234125740
MGI SNP Detail
Alliance Variant
Chr2:34144893 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1169 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259537715
MGI SNP Detail
Alliance Variant
Chr2:34144896 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1166 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216898369
MGI SNP Detail
Alliance Variant
Chr2:34144910 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1152 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs240203537
MGI SNP Detail
Alliance Variant
Chr2:34144924 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1138 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27170671
MGI SNP Detail
Alliance Variant
Chr2:34145204 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 858 bp proximal
SNP A/T T T T T T A T T T T T T T
rs213724559
MGI SNP Detail
Alliance Variant
Chr2:34145230 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 832 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230535149
MGI SNP Detail
Alliance Variant
Chr2:34145231 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 831 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249575180
MGI SNP Detail
Alliance Variant
Chr2:34145242 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 820 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227186226
MGI SNP Detail
Alliance Variant
Chr2:34145248 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 814 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27170670
MGI SNP Detail
Alliance Variant
Chr2:34145362 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 700 bp proximal
SNP A/G G G G G G A G G G G G G
rs263302383
MGI SNP Detail
Alliance Variant
Chr2:34145373 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 689 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs223957314
MGI SNP Detail
Alliance Variant
Chr2:34145393 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 669 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213860119
MGI SNP Detail
Alliance Variant
Chr2:34145513 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 549 bp proximal
SNP A/G G A
rs239101613
MGI SNP Detail
Alliance Variant
Chr2:34145715 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 347 bp proximal
SNP A A A
rs246634606
MGI SNP Detail
Alliance Variant
Chr2:34145772 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 290 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255023663
MGI SNP Detail
Alliance Variant
Chr2:34145934 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 128 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218388490
MGI SNP Detail
Alliance Variant
Chr2:34146189 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580215695
MGI SNP Detail
Alliance Variant
Chr2:34146776 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 325 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235634173
MGI SNP Detail
Alliance Variant
Chr2:34146796 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 345 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254224929
MGI SNP Detail
Alliance Variant
Chr2:34146865 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 414 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235775768
MGI SNP Detail
Alliance Variant
Chr2:34146889 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 438 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254153546
MGI SNP Detail
Alliance Variant
Chr2:34147055 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr406600 within coordinates of
Rr555443 604 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265791090
MGI SNP Detail
Alliance Variant
Chr2:34147483 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1032 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231770719
MGI SNP Detail
Alliance Variant
Chr2:34147539 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1088 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245890446
MGI SNP Detail
Alliance Variant
Chr2:34147682 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1231 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213856864
MGI SNP Detail
Alliance Variant
Chr2:34147727 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1276 bp distal
Rr555444 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27170669
MGI SNP Detail
Alliance Variant
Chr2:34147787 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1336 bp distal
Rr555444 within coordinates of
SNP G/T G G G G G G T G G G G G G G
rs27170668
MGI SNP Detail
Alliance Variant
Chr2:34148187 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1736 bp distal
SNP A/G A A A A A A A A A A A A G A
rs251382001
MGI SNP Detail
Alliance Variant
Chr2:34148407 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555443 1956 bp distal
Rr555445 within coordinates of
SNP A/G A G
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Showing SNP(s) 1 - 33 of 33

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory