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Mouse SNP Summary
Symbol
Name
ID
Rr555447
regulatory region 555447
MGI:8017579

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265630297
MGI SNP Detail
Alliance Variant
Chr2:34163896 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1803 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257433837
MGI SNP Detail
Alliance Variant
Chr2:34163901 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1798 bp proximal
SNP C/T C T
rs27170642
MGI SNP Detail
Alliance Variant
Chr2:34163934 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1765 bp proximal
SNP C/T T T T T T T C T T T T T T T
rs256788316
MGI SNP Detail
Alliance Variant
Chr2:34163956 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1743 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27170641
MGI SNP Detail
Alliance Variant
Chr2:34163992 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1707 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs254604290
MGI SNP Detail
Alliance Variant
Chr2:34164059 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1640 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212185354
MGI SNP Detail
Alliance Variant
Chr2:34164148 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1551 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243270704
MGI SNP Detail
Alliance Variant
Chr2:34164238 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1461 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253939240
MGI SNP Detail
Alliance Variant
Chr2:34164290 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1409 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216005559
MGI SNP Detail
Alliance Variant
Chr2:34164356 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1343 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234061852
MGI SNP Detail
Alliance Variant
Chr2:34164361 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1338 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252008846
MGI SNP Detail
Alliance Variant
Chr2:34164387 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1312 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219588976
MGI SNP Detail
Alliance Variant
Chr2:34164432 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1267 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs235345573
MGI SNP Detail
Alliance Variant
Chr2:34164468 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1231 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260796204
MGI SNP Detail
Alliance Variant
Chr2:34164544 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1155 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27170640
MGI SNP Detail
Alliance Variant
Chr2:34164827 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 872 bp proximal
SNP A/G A A A A A A A A A A A A G A
rs249889011
MGI SNP Detail
Alliance Variant
Chr2:34164882 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 817 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs263390513
MGI SNP Detail
Alliance Variant
Chr2:34164923 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 776 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220444017
MGI SNP Detail
Alliance Variant
Chr2:34165020 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 679 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238086117
MGI SNP Detail
Alliance Variant
Chr2:34165025 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 674 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27170639
MGI SNP Detail
Alliance Variant
Chr2:34165101 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 598 bp proximal
SNP A/G A A A A A A G A A A A A A G G G
rs225744364
MGI SNP Detail
Alliance Variant
Chr2:34165144 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 555 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250126576
MGI SNP Detail
Alliance Variant
Chr2:34165224 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 475 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264724439
MGI SNP Detail
Alliance Variant
Chr2:34165890 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234007295
MGI SNP Detail
Alliance Variant
Chr2:34166012 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259351786
MGI SNP Detail
Alliance Variant
Chr2:34166106 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 44 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216107069
MGI SNP Detail
Alliance Variant
Chr2:34166150 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 88 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227413421
MGI SNP Detail
Alliance Variant
Chr2:34166510 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 448 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245831625
MGI SNP Detail
Alliance Variant
Chr2:34166538 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 476 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213586572
MGI SNP Detail
Alliance Variant
Chr2:34166677 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 615 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237253782
MGI SNP Detail
Alliance Variant
Chr2:34166727 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 665 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255355851
MGI SNP Detail
Alliance Variant
Chr2:34166741 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 679 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218962078
MGI SNP Detail
Alliance Variant
Chr2:34166805 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 743 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232366561
MGI SNP Detail
Alliance Variant
Chr2:34166901 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 839 bp distal
SNP A/G G A
rs239398638
MGI SNP Detail
Alliance Variant
Chr2:34166935 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 873 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251731045
MGI SNP Detail
Alliance Variant
Chr2:34167067 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1005 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252509948
MGI SNP Detail
Alliance Variant
Chr2:34167143 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1081 bp distal
SNP C/T C T
rs220592882
MGI SNP Detail
Alliance Variant
Chr2:34167212 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1150 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238047164
MGI SNP Detail
Alliance Variant
Chr2:34167257 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1195 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221544894
MGI SNP Detail
Alliance Variant
Chr2:34167262 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1200 bp distal
SNP A/T A T
rs27170638
MGI SNP Detail
Alliance Variant
Chr2:34167266 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1204 bp distal
SNP C/T C C C C C C T C C C C C T C
rs27170637
MGI SNP Detail
Alliance Variant
Chr2:34167321 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1259 bp distal
SNP C/T T T T T C T T T T T T C C C
rs27170636
MGI SNP Detail
Alliance Variant
Chr2:34167411 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1349 bp distal
SNP C/T C C C C C C C C C C C C C T
rs261749193
MGI SNP Detail
Alliance Variant
Chr2:34167417 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1355 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235271312
MGI SNP Detail
Alliance Variant
Chr2:34167508 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1446 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247872498
MGI SNP Detail
Alliance Variant
Chr2:34167548 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1486 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260090877
MGI SNP Detail
Alliance Variant
Chr2:34167613 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1551 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227539727
MGI SNP Detail
Alliance Variant
Chr2:34167672 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1610 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs584040467
MGI SNP Detail
Alliance Variant
Chr2:34167741 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1679 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587552088
MGI SNP Detail
Alliance Variant
Chr2:34167761 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1699 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581236450
MGI SNP Detail
Alliance Variant
Chr2:34167767 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1705 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245758037
MGI SNP Detail
Alliance Variant
Chr2:34167795 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1733 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213745187
MGI SNP Detail
Alliance Variant
Chr2:34167936 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1874 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228681002
MGI SNP Detail
Alliance Variant
Chr2:34167942 Pbx3 Intron
Pbx3 Noncoding-Transcript-Variant
Rr555447 1880 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 54 of 54

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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