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Mouse SNP Summary
Symbol
Name
ID 		Rr556445
regulatory region 556445
MGI:8018577

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258576611
MGI SNP Detail
Alliance Variant		 Chr2:45005419 Rr556444 within coordinates of
Rr556445 1978 bp proximal
Zeb2 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227185932
MGI SNP Detail
Alliance Variant		 Chr2:45005469 Rr556444 within coordinates of
Rr556445 1928 bp proximal
Zeb2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G G G G A G G G A G G G G G G G G G G G G
rs247510437
MGI SNP Detail
Alliance Variant		 Chr2:45005562 Rr556444 within coordinates of
Rr556445 1835 bp proximal
Zeb2 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T G G T T T T G T T T T T T T T G T T T G T T T T T T T G T T T T
rs264888773
MGI SNP Detail
Alliance Variant		 Chr2:45005723 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1674 bp proximal
Zeb2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G G G G A G G G A G G G G G G G G G G G G
rs218242017
MGI SNP Detail
Alliance Variant		 Chr2:45005758 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1639 bp proximal
Zeb2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239858391
MGI SNP Detail
Alliance Variant		 Chr2:45005780 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1617 bp proximal
Zeb2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257724564
MGI SNP Detail
Alliance Variant		 Chr2:45006071 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1326 bp proximal
Zeb2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228225995
MGI SNP Detail
Alliance Variant		 Chr2:45006114 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1283 bp proximal
Zeb2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257664119
MGI SNP Detail
Alliance Variant		 Chr2:45006166 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1231 bp proximal
Zeb2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T C C T T T T C T T T T T T T C T T T C T T T T T T T C T T T T
rs264602149
MGI SNP Detail
Alliance Variant		 Chr2:45006218 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1179 bp proximal
Zeb2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G T T G G G G T G G G G G G G G T G G G T G G G G G G G G G G G G
rs50958528
MGI SNP Detail
Alliance Variant		 Chr2:45006256 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1141 bp proximal
Zeb2 Intron
 SNP G G G G
rs253602090
MGI SNP Detail
Alliance Variant		 Chr2:45006388 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 1009 bp proximal
Zeb2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs212813749
MGI SNP Detail
Alliance Variant		 Chr2:45006509 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 888 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229663569
MGI SNP Detail
Alliance Variant		 Chr2:45006639 Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 758 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244328971
MGI SNP Detail
Alliance Variant		 Chr2:45006846 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 551 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213447295
MGI SNP Detail
Alliance Variant		 Chr2:45006891 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 506 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233461316
MGI SNP Detail
Alliance Variant		 Chr2:45007069 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 328 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP A A A A A A A A A A A A A A A A A A A A A A A
rs262854502
MGI SNP Detail
Alliance Variant		 Chr2:45007070 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 327 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580484939
MGI SNP Detail
Alliance Variant		 Chr2:45007133 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 264 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T C C T T T C T T T T T T T T T C T T T T T T T T T T T
rs242021080
MGI SNP Detail
Alliance Variant		 Chr2:45007145 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 252 bp proximal
Zeb2 Intron
Zeb2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A G G A A A G A A A A A A A A A A G A A A A A A A A A A A
rs256268935
MGI SNP Detail
Alliance Variant		 Chr2:45007351 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556444 within coordinates of
Rr556445 46 bp proximal
Tssr23989 within coordinates of
Zeb2 mRNA-UTR
Zeb2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs218185834
MGI SNP Detail		 Chr2:45007477 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556445 within coordinates of
Tssr23992 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239795019
MGI SNP Detail		 Chr2:45007563 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556445 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225145515
MGI SNP Detail		 Chr2:45007566 Cpgi11634 within coordinates of
Rr373117 within coordinates of
Rr556445 within coordinates of
 SNP C C C
rs222087277
MGI SNP Detail		 Chr2:45008001 Rr556445 128 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C C C C G C C C G C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50781878
MGI SNP Detail		 Chr2:45008038 Rr556445 165 bp distal
 SNP T T T T T
rs266222390
MGI SNP Detail		 Chr2:45008087 Rr556445 214 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A A A A A A A G A A A G A A A A A A G A A A A
rs52490679
MGI SNP Detail		 Chr2:45008198 Rr556445 325 bp distal
 SNP C C C C
rs245426974
MGI SNP Detail		 Chr2:45008245 Gm28643 within coordinates of
Rr556445 372 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254252259
MGI SNP Detail		 Chr2:45008363 Gm28643 within coordinates of
Rr556445 490 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223140402
MGI SNP Detail		 Chr2:45008375 Gm28643 within coordinates of
Rr556445 502 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244317685
MGI SNP Detail		 Chr2:45008388 Gm28643 within coordinates of
Rr556445 515 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213435560
MGI SNP Detail		 Chr2:45008700 Gm28643 within coordinates of
Rr556445 827 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32837476
MGI SNP Detail		 Chr2:45008710 Gm28643 within coordinates of
Rr556445 837 bp distal
 SNP C/T T T C T T T
rs252073895
MGI SNP Detail		 Chr2:45008715 Gm28643 within coordinates of
Rr556445 842 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33198717
MGI SNP Detail		 Chr2:45008829 Gm28643 within coordinates of
Rr556445 956 bp distal
 SNP C/T C C T C C C
rs239375926
MGI SNP Detail		 Chr2:45008845 Gm28643 within coordinates of
Rr556445 972 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C C A A A A C A A A A A A A A C A A A C A A A A A A C A A A A
rs261490970
MGI SNP Detail		 Chr2:45009222 Gm28643 within coordinates of
Rr556445 1349 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C C T T T T C T T T T T T T T C T T T C T T T T T T T T T T T T
rs212093466
MGI SNP Detail		 Chr2:45009275 Gm28643 within coordinates of
Rr556445 1402 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T T A A A A T A A A A A A A A T A A A T A A A A A A A T A A A A
rs232933064
MGI SNP Detail		 Chr2:45009282 Gm28643 within coordinates of
Rr556445 1409 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251317691
MGI SNP Detail		 Chr2:45009379 Gm28643 within coordinates of
Rr556445 1506 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G G G G A G G G A G G G G G G G A G G G G
rs222024059
MGI SNP Detail		 Chr2:45009504 Gm28643 within coordinates of
Rr556445 1631 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247966193
MGI SNP Detail		 Chr2:45009517 Gm28643 within coordinates of
Rr556445 1644 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585500910
MGI SNP Detail		 Chr2:45009752 Gm28643 within coordinates of
Rr556445 1879 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C C C C G C C C G C C C C C C C C C C C C
rs6278318
MGI SNP Detail		 Chr2:45009831 Gm28643 within coordinates of
Rr556445 1958 bp distal
 SNP C/T T C
rs6278319
MGI SNP Detail		 Chr2:45009832 Gm28643 within coordinates of
Rr556445 1959 bp distal
 SNP A/G G A
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Showing SNP(s) 1 - 46 of 46
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory