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Mouse SNP Summary
Symbol
Name
ID
Rr556759
regulatory region 556759
MGI:8018891

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Showing SNP(s) 1 - 100 of 175

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586642508
MGI SNP Detail
Chr2:50581826 Rr556759 1998 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47676695
MGI SNP Detail
Chr2:50581833 Rr556759 1991 bp proximal
SNP G G G G G
rs47514833
MGI SNP Detail
Chr2:50581841 Rr556759 1983 bp proximal
SNP A A A A A
rs46822653
MGI SNP Detail
Chr2:50581853 Rr556759 1971 bp proximal
SNP C/G C C C G
rs52709620
MGI SNP Detail
Chr2:50581918 Rr556759 1906 bp proximal
SNP T T T T T
rs50059385
MGI SNP Detail
Chr2:50581971 Rr556759 1853 bp proximal
SNP A/G A A A G
rs580618489
MGI SNP Detail
Chr2:50581984 Rr556759 1840 bp proximal
SNP C/T C C C C T C C C C C C C C C C C C C C C C
rs583886563
MGI SNP Detail
Chr2:50581988 Rr556759 1836 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G
rs587016134
MGI SNP Detail
Chr2:50581999 Rr556759 1825 bp proximal
SNP C/T T T T T C C C C T T C C C C C C T C T T C T T T T C T T T C C T T T C C C T C T T T C T T T C T T T T
rs237452498
MGI SNP Detail
Chr2:50582003 Rr556759 1821 bp proximal
SNP C/G C G
rs52442504
MGI SNP Detail
Chr2:50582013 Rr556759 1811 bp proximal
SNP A/G A A A G
rs49200597
MGI SNP Detail
Chr2:50582049 Rr556759 1775 bp proximal
SNP C C C C C
rs251836073
MGI SNP Detail
Chr2:50582133 Rr556759 1691 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs46141188
MGI SNP Detail
Chr2:50582136 Rr556759 1688 bp proximal
SNP T T T T T
rs47412270
MGI SNP Detail
Chr2:50582157 Rr556759 1667 bp proximal
SNP C C C C C C
rs50454941
MGI SNP Detail
Chr2:50582170 Rr556759 1654 bp proximal
SNP A A A A A A
rs217216423
MGI SNP Detail
Chr2:50582185 Rr556759 1639 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51929341
MGI SNP Detail
Chr2:50582229 Rr556759 1595 bp proximal
SNP G G G G G G
rs51349368
MGI SNP Detail
Chr2:50582249 Rr556759 1575 bp proximal
SNP C C C C C C
rs108734430
MGI SNP Detail
Chr2:50582288 Rr556759 1536 bp proximal
SNP T T T T T T
rs238684629
MGI SNP Detail
Chr2:50582309 Rr556759 1515 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257103303
MGI SNP Detail
Chr2:50582324 Rr556759 1500 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48939818
MGI SNP Detail
Chr2:50582330 Rr556759 1494 bp proximal
SNP C C C C C C
rs239137630
MGI SNP Detail
Chr2:50582332 Rr556759 1492 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259700459
MGI SNP Detail
Chr2:50582344 Rr556759 1480 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51720901
MGI SNP Detail
Chr2:50582348 Rr556759 1476 bp proximal
SNP C C C C C C
rs228050691
MGI SNP Detail
Chr2:50582362 Rr556759 1462 bp proximal
SNP C C C
rs387083493
MGI SNP Detail
Chr2:50582389 Rr556759 1435 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T A T T A A T T T A T T T T T T T T T T T T A T T T T T A
rs264884013
MGI SNP Detail
Chr2:50582404 Rr556759 1420 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241712661
MGI SNP Detail
Chr2:50582433 Rr556759 1391 bp proximal
SNP T T T
rs261007488
MGI SNP Detail
Chr2:50582452 Rr556759 1372 bp proximal
SNP C C C
rs224062042
MGI SNP Detail
Chr2:50582453 Rr556759 1371 bp proximal
SNP A A A
rs244044507
MGI SNP Detail
Chr2:50582493 Rr556759 1331 bp proximal
SNP G G G
rs214188547
MGI SNP Detail
Chr2:50582553 Rr556759 1271 bp proximal
SNP T T T
rs217647815
MGI SNP Detail
Chr2:50582566 Rr556759 1258 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231519967
MGI SNP Detail
Chr2:50582610 Rr556759 1214 bp proximal
SNP C C C
rs583359983
MGI SNP Detail
Chr2:50582612 Rr556759 1212 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234707201
MGI SNP Detail
Chr2:50582700 Rr556759 1124 bp proximal
SNP C/T T C
rs244869884
MGI SNP Detail
Chr2:50582756 Rr556759 1068 bp proximal
SNP C/T T T T T T T T T T T C T T T T C T T T T C T C T
rs253292858
MGI SNP Detail
Chr2:50582757 Rr556759 1067 bp proximal
SNP A/C A C
rs212124614
MGI SNP Detail
Chr2:50582763 Rr556759 1061 bp proximal
SNP A/C A C
rs230904741
MGI SNP Detail
Chr2:50582797 Rr556759 1027 bp proximal
SNP G/T G T
rs262115722
MGI SNP Detail
Chr2:50582803 Rr556759 1021 bp proximal
SNP G/T G T
rs387147265
MGI SNP Detail
Chr2:50582812 Rr556759 1012 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C A C C A A C C C A C C C C C C C C C C C C A C C C C C A
rs581045826
MGI SNP Detail
Chr2:50582841 Rr556759 983 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C T T C C C T C C C C C C C C C C C C T C C C C C T
rs223602290
MGI SNP Detail
Chr2:50582842 Rr556759 982 bp proximal
SNP A A A
rs246730876
MGI SNP Detail
Chr2:50582889 Rr556759 935 bp proximal
SNP A A A
rs261553229
MGI SNP Detail
Chr2:50582917 Rr556759 907 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233412337
MGI SNP Detail
Chr2:50582964 Rr556759 860 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs51955584
MGI SNP Detail
Chr2:50582974 Rr556759 850 bp proximal
SNP C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48782666
MGI SNP Detail
Chr2:50582975 Rr556759 849 bp proximal
SNP A A A A A A
rs48048506
MGI SNP Detail
Chr2:50583044 Rr556759 780 bp proximal
SNP C C C C C C
rs47605413
MGI SNP Detail
Chr2:50583068 Rr556759 756 bp proximal
SNP C C C C C C
rs51637974
MGI SNP Detail
Chr2:50583114 Rr556759 710 bp proximal
SNP C/T T C
rs232841126
MGI SNP Detail
Chr2:50583115 Rr556759 709 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48193709
MGI SNP Detail
Chr2:50583119 Rr556759 705 bp proximal
SNP A/C A C
rs46703898
MGI SNP Detail
Chr2:50583125 Rr556759 699 bp proximal
SNP T T T T
rs47246770
MGI SNP Detail
Chr2:50583133 Rr556759 691 bp proximal
SNP C/T T T T C T
rs386844772
MGI SNP Detail
Chr2:50583136 Rr556759 688 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C T T C C C T C C C C C C C C C C C C T C C C C C T
rs47951752
MGI SNP Detail
Chr2:50583137 Rr556759 687 bp proximal
SNP T T T T T T
rs220678490
MGI SNP Detail
Chr2:50583158 Rr556759 666 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49715398
MGI SNP Detail
Chr2:50583165 Rr556759 659 bp proximal
SNP T T T T T T
rs51649549
MGI SNP Detail
Chr2:50583178 Rr556759 646 bp proximal
SNP G G G G G G
rs221989001
MGI SNP Detail
Chr2:50583184 Rr556759 640 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs48607281
MGI SNP Detail
Chr2:50583208 Rr556759 616 bp proximal
SNP C C C C
rs387427401
MGI SNP Detail
Chr2:50583212 Rr556759 612 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A G A A A G A A A A A A A A A A A A G A A A A A G
rs50130391
MGI SNP Detail
Chr2:50583214 Rr556759 610 bp proximal
SNP T T T T T
rs47068397
MGI SNP Detail
Chr2:50583252 Rr556759 572 bp proximal
SNP A A A A A
rs242524743
MGI SNP Detail
Chr2:50583254 Rr556759 570 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs45777916
MGI SNP Detail
Chr2:50583262 Rr556759 562 bp proximal
SNP T T T T T
rs47378156
MGI SNP Detail
Chr2:50583272 Rr556759 552 bp proximal
SNP G G G G G
rs47700476
MGI SNP Detail
Chr2:50583276 Rr556759 548 bp proximal
SNP G G G G G
rs48440541
MGI SNP Detail
Chr2:50583342 Rr556759 482 bp proximal
SNP T T T T T
rs49309765
MGI SNP Detail
Chr2:50583367 Rr556759 457 bp proximal
SNP T T T T T
rs247115207
MGI SNP Detail
Chr2:50583387 Rr556759 437 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217998696
MGI SNP Detail
Chr2:50583400 Rr556759 424 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237202532
MGI SNP Detail
Chr2:50583412 Rr556759 412 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249041988
MGI SNP Detail
Chr2:50583418 Rr556759 406 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs387310919
MGI SNP Detail
Chr2:50583462 Rr556759 362 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A G G A A A G A A A A A A A A A A A A G A A A A A G
rs214945514
MGI SNP Detail
Chr2:50583484 Rr556759 340 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs231550545
MGI SNP Detail
Chr2:50583560 Rr556759 264 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251417272
MGI SNP Detail
Chr2:50583638 Rr556759 186 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222026453
MGI SNP Detail
Chr2:50583744 Rr556759 80 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234061415
MGI SNP Detail
Chr2:50583817 Rr556759 7 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs387335045
MGI SNP Detail
Chr2:50583879 Rr556759 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T
rs50434938
MGI SNP Detail
Chr2:50583912 Rr556759 within coordinates of
SNP G G G G G G
rs226213309
MGI SNP Detail
Chr2:50583930 Rr556759 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48400317
MGI SNP Detail
Chr2:50584021 Rr556759 within coordinates of
SNP G/T G T T T T
rs51147189
MGI SNP Detail
Chr2:50584033 Rr556759 within coordinates of
SNP T T T T T T
rs46737883
MGI SNP Detail
Chr2:50584035 Rr556759 within coordinates of
SNP C C C C C C
rs51753454
MGI SNP Detail
Chr2:50584187 Rr556759 within coordinates of
SNP C C C C C C
rs387166032
MGI SNP Detail
Chr2:50584196 Rr556759 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G A G G G A G G G G G G G G G G G G A G G G G G A
rs387397921
MGI SNP Detail
Chr2:50584266 Rr556759 14 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C A C C C C C C C C C C C C C C C C C
rs387751523
MGI SNP Detail
Chr2:50584329 Rr556759 77 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A
rs387133704
MGI SNP Detail
Chr2:50584331 Rr556759 79 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T T T T T T T C T T T T T
rs257888894
MGI SNP Detail
Chr2:50584369 Rr556759 117 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226594400
MGI SNP Detail
Chr2:50584413 Rr556759 161 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578832390
MGI SNP Detail
Chr2:50584422 Rr556759 170 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48124281
MGI SNP Detail
Chr2:50584430 Rr556759 178 bp distal
SNP C/G C C C G
rs51433409
MGI SNP Detail
Chr2:50584437 Rr556759 185 bp distal
SNP A A A A A A
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Showing SNP(s) 1 - 100 of 175

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory