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Mouse SNP Summary
Symbol
Name
ID
Rr557412
regulatory region 557412
MGI:8019544

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255338351
MGI SNP Detail
Alliance Variant
Chr2:59059099 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1989 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs212181952
MGI SNP Detail
Alliance Variant
Chr2:59059123 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1965 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230830424
MGI SNP Detail
Alliance Variant
Chr2:59059136 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1952 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262117788
MGI SNP Detail
Alliance Variant
Chr2:59059235 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1853 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223202381
MGI SNP Detail
Alliance Variant
Chr2:59059237 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1851 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247660067
MGI SNP Detail
Alliance Variant
Chr2:59059239 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1849 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs259394589
MGI SNP Detail
Alliance Variant
Chr2:59059240 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1848 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221932265
MGI SNP Detail
Alliance Variant
Chr2:59059308 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1780 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241571174
MGI SNP Detail
Alliance Variant
Chr2:59059319 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1769 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253592048
MGI SNP Detail
Alliance Variant
Chr2:59059364 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1724 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224004515
MGI SNP Detail
Alliance Variant
Chr2:59059444 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1644 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs28027350
MGI SNP Detail
Alliance Variant
Chr2:59059627 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1461 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs28027349
MGI SNP Detail
Alliance Variant
Chr2:59059685 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1403 bp proximal
SNP C/T T T T T T T C T T T C C T T C T C
rs231126671
MGI SNP Detail
Alliance Variant
Chr2:59059701 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1387 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28027348
MGI SNP Detail
Alliance Variant
Chr2:59059740 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1348 bp proximal
SNP A/G A A A A A A A A A G G A A A G
rs28027347
MGI SNP Detail
Alliance Variant
Chr2:59059853 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1235 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs28027346
MGI SNP Detail
Alliance Variant
Chr2:59059929 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1159 bp proximal
SNP A/G A A A A A A G A A A G G A A G A G
rs249213264
MGI SNP Detail
Alliance Variant
Chr2:59059930 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1158 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212115779
MGI SNP Detail
Alliance Variant
Chr2:59059937 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1151 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237348806
MGI SNP Detail
Alliance Variant
Chr2:59059960 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1128 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250838845
MGI SNP Detail
Alliance Variant
Chr2:59060051 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1037 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28027345
MGI SNP Detail
Alliance Variant
Chr2:59060168 Pkp4 Intron
Pkp4 mRNA-UTR
Pkp4 Noncoding-Transcript-Variant
Rr557412 920 bp proximal
SNP C/T T T T T T T C T T T T T T T T
rs238102269
MGI SNP Detail
Alliance Variant
Chr2:59060202 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Pkp4 Splice-Site
Rr557412 886 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263269514
MGI SNP Detail
Alliance Variant
Chr2:59060230 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 858 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221894962
MGI SNP Detail
Alliance Variant
Chr2:59060237 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 851 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219701790
MGI SNP Detail
Alliance Variant
Chr2:59060244 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 844 bp proximal
SNP C/G G C
rs28027344
MGI SNP Detail
Alliance Variant
Chr2:59060260 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 828 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs248162162
MGI SNP Detail
Alliance Variant
Chr2:59060298 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 790 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218343599
MGI SNP Detail
Alliance Variant
Chr2:59060373 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 715 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245590331
MGI SNP Detail
Alliance Variant
Chr2:59060527 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 561 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262639596
MGI SNP Detail
Alliance Variant
Chr2:59060537 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 551 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223900313
MGI SNP Detail
Alliance Variant
Chr2:59060560 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 528 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246146130
MGI SNP Detail
Alliance Variant
Chr2:59060631 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 457 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28027343
MGI SNP Detail
Alliance Variant
Chr2:59060638 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 450 bp proximal
SNP C/T C C C C C C C C C C C C C C T
rs228782097
MGI SNP Detail
Alliance Variant
Chr2:59060680 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 408 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28027342
MGI SNP Detail
Alliance Variant
Chr2:59060696 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 392 bp proximal
SNP C/T C C C C C C C C C T T C C C T
rs256386135
MGI SNP Detail
Alliance Variant
Chr2:59060760 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 328 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28027341
MGI SNP Detail
Alliance Variant
Chr2:59060821 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 267 bp proximal
SNP G/T G G G G G G T G G G G G G G G
rs255337492
MGI SNP Detail
Alliance Variant
Chr2:59060876 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 212 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214886103
MGI SNP Detail
Alliance Variant
Chr2:59060925 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 163 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs240163366
MGI SNP Detail
Alliance Variant
Chr2:59060958 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 130 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265009751
MGI SNP Detail
Alliance Variant
Chr2:59060964 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 124 bp proximal
SNP C/T C T
rs216525161
MGI SNP Detail
Alliance Variant
Chr2:59060967 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 121 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235081542
MGI SNP Detail
Alliance Variant
Chr2:59061092 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs28027340
MGI SNP Detail
Alliance Variant
Chr2:59061095 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G G G G G G G A G G G G G G G
rs28027339
MGI SNP Detail
Alliance Variant
Chr2:59061107 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP G/T T T T T T T T T T T T T T T G
rs236231867
MGI SNP Detail
Alliance Variant
Chr2:59061109 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230734374
MGI SNP Detail
Alliance Variant
Chr2:59061153 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/T A T
rs583195598
MGI SNP Detail
Alliance Variant
Chr2:59061163 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28027338
MGI SNP Detail
Alliance Variant
Chr2:59061205 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C C C C T C T C C C C T C T T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223926805
MGI SNP Detail
Alliance Variant
Chr2:59061239 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248602307
MGI SNP Detail
Alliance Variant
Chr2:59061247 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G A G G A G G G G G G A A A G G G G G A G G G G
rs260457891
MGI SNP Detail
Alliance Variant
Chr2:59061257 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs259829446
MGI SNP Detail
Alliance Variant
Chr2:59061260 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C T
rs243023589
MGI SNP Detail
Alliance Variant
Chr2:59061261 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs228513858
MGI SNP Detail
Alliance Variant
Chr2:59061293 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C T
rs229665996
MGI SNP Detail
Alliance Variant
Chr2:59061310 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G T G G G G
rs243655563
MGI SNP Detail
Alliance Variant
Chr2:59061319 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265300448
MGI SNP Detail
Alliance Variant
Chr2:59061344 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs231738415
MGI SNP Detail
Alliance Variant
Chr2:59061407 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 13 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587385952
MGI SNP Detail
Alliance Variant
Chr2:59061473 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 79 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28027337
MGI SNP Detail
Alliance Variant
Chr2:59061534 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 140 bp distal
SNP C/G C C C C C C C C C C G C C C C
rs246106052
MGI SNP Detail
Alliance Variant
Chr2:59061538 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 144 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216833392
MGI SNP Detail
Alliance Variant
Chr2:59061601 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 207 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229429726
MGI SNP Detail
Alliance Variant
Chr2:59061619 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 225 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242189874
MGI SNP Detail
Alliance Variant
Chr2:59061637 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 243 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581780557
MGI SNP Detail
Alliance Variant
Chr2:59061773 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 379 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248805361
MGI SNP Detail
Alliance Variant
Chr2:59061781 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 387 bp distal
SNP C/T T C
rs238007885
MGI SNP Detail
Alliance Variant
Chr2:59061782 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 388 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584115690
MGI SNP Detail
Alliance Variant
Chr2:59061783 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 389 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257861619
MGI SNP Detail
Alliance Variant
Chr2:59061834 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 440 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587082054
MGI SNP Detail
Alliance Variant
Chr2:59061856 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 462 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264443899
MGI SNP Detail
Alliance Variant
Chr2:59061877 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 483 bp distal
SNP C/T C T
rs215724248
MGI SNP Detail
Alliance Variant
Chr2:59061897 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 503 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234457485
MGI SNP Detail
Alliance Variant
Chr2:59061901 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 507 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254092762
MGI SNP Detail
Alliance Variant
Chr2:59061903 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 509 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223260576
MGI SNP Detail
Alliance Variant
Chr2:59061912 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 518 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A A
rs580633551
MGI SNP Detail
Alliance Variant
Chr2:59061937 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 543 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584347077
MGI SNP Detail
Alliance Variant
Chr2:59061979 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 585 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237009080
MGI SNP Detail
Alliance Variant
Chr2:59062001 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 607 bp distal
Rr557413 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261100458
MGI SNP Detail
Alliance Variant
Chr2:59062017 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 623 bp distal
Rr557413 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs222023489
MGI SNP Detail
Alliance Variant
Chr2:59062029 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 635 bp distal
Rr557413 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs28027336
MGI SNP Detail
Alliance Variant
Chr2:59062071 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 677 bp distal
Rr557413 within coordinates of
SNP A/C A A A A A A A A A A C A A A
rs262967843
MGI SNP Detail
Alliance Variant
Chr2:59062084 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 690 bp distal
Rr557413 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs232167069
MGI SNP Detail
Alliance Variant
Chr2:59062086 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 692 bp distal
Rr557413 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs28027335
MGI SNP Detail
Alliance Variant
Chr2:59062113 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 719 bp distal
Rr557413 within coordinates of
SNP C/T C C C C C C C C C C T C C C C
rs240103384
MGI SNP Detail
Alliance Variant
Chr2:59062137 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 743 bp distal
Rr557413 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259137800
MGI SNP Detail
Alliance Variant
Chr2:59062147 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 753 bp distal
Rr557413 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229375517
MGI SNP Detail
Alliance Variant
Chr2:59062192 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 798 bp distal
Rr557413 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242508488
MGI SNP Detail
Alliance Variant
Chr2:59062204 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 810 bp distal
Rr557413 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213065515
MGI SNP Detail
Alliance Variant
Chr2:59062240 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 846 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28027334
MGI SNP Detail
Alliance Variant
Chr2:59062262 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 868 bp distal
SNP C/T C C C C C C T C C C C C C C
rs256195954
MGI SNP Detail
Alliance Variant
Chr2:59062297 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 903 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28027333
MGI SNP Detail
Alliance Variant
Chr2:59062389 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 995 bp distal
SNP A/G A A A A A A A A A G G A A G A G
rs234797793
MGI SNP Detail
Alliance Variant
Chr2:59062417 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1023 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254033931
MGI SNP Detail
Alliance Variant
Chr2:59062418 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1024 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28027332
MGI SNP Detail
Alliance Variant
Chr2:59062492 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1098 bp distal
SNP C/T T T T T T T T T T C C T T T C
rs250011952
MGI SNP Detail
Alliance Variant
Chr2:59062498 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1104 bp distal
SNP A/C A C
rs28027331
MGI SNP Detail
Alliance Variant
Chr2:59062542 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1148 bp distal
SNP C/T C C C C C C C C C C T C C C
rs28027330
MGI SNP Detail
Alliance Variant
Chr2:59062582 Pkp4 Intron
Pkp4 Noncoding-Transcript-Variant
Rr557412 1188 bp distal
SNP C/T C C C C C C T C C C C C C C C
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Showing SNP(s) 1 - 100 of 120

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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