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Mouse SNP Summary
Symbol
Name
ID 		Rr557889
regulatory region 557889
MGI:8020021

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217566417
MGI SNP Detail
Alliance Variant		 Chr2:62448132 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1958 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235750495
MGI SNP Detail
Alliance Variant		 Chr2:62448151 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1939 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253231613
MGI SNP Detail
Alliance Variant		 Chr2:62448169 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1921 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs28039506
MGI SNP Detail
Alliance Variant		 Chr2:62448180 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1910 bp proximal
 SNP C/G G G G G G C G C C C G G C G G G
rs49145109
MGI SNP Detail
Alliance Variant		 Chr2:62448289 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1801 bp proximal
 SNP A/C C A
rs262225927
MGI SNP Detail
Alliance Variant		 Chr2:62448296 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1794 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219033261
MGI SNP Detail
Alliance Variant		 Chr2:62448349 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1741 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230224940
MGI SNP Detail
Alliance Variant		 Chr2:62448403 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1687 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253472884
MGI SNP Detail
Alliance Variant		 Chr2:62448455 Ifih1 Intron
Rr557887 within coordinates of
Rr557889 1635 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222453935
MGI SNP Detail
Alliance Variant		 Chr2:62448457 Ifih1 Intron
Rr557889 1633 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249871035
MGI SNP Detail
Alliance Variant		 Chr2:62448458 Ifih1 Intron
Rr557889 1632 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263384740
MGI SNP Detail
Alliance Variant		 Chr2:62448641 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1449 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244056579
MGI SNP Detail
Alliance Variant		 Chr2:62448687 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1403 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257503483
MGI SNP Detail
Alliance Variant		 Chr2:62448699 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1391 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582680669
MGI SNP Detail
Alliance Variant		 Chr2:62448718 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1372 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs52168726
MGI SNP Detail
Alliance Variant		 Chr2:62448726 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1364 bp proximal
 SNP A/G G G A
rs243411282
MGI SNP Detail
Alliance Variant		 Chr2:62448741 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1349 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs52080851
MGI SNP Detail
Alliance Variant		 Chr2:62448774 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1316 bp proximal
 SNP A/G G A
rs233242653
MGI SNP Detail
Alliance Variant		 Chr2:62448793 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1297 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs52382727
MGI SNP Detail
Alliance Variant		 Chr2:62448803 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1287 bp proximal
 SNP A/G G G A
rs215791232
MGI SNP Detail
Alliance Variant		 Chr2:62448813 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1277 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239051737
MGI SNP Detail
Alliance Variant		 Chr2:62448875 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1215 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs28039505
MGI SNP Detail
Alliance Variant		 Chr2:62448879 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1211 bp proximal
 SNP A/T A A T A A T A T T T T T T T A T A A
rs213252021
MGI SNP Detail
Alliance Variant		 Chr2:62448886 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1204 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230366531
MGI SNP Detail
Alliance Variant		 Chr2:62448887 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1203 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253396477
MGI SNP Detail
Alliance Variant		 Chr2:62448935 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1155 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48914372
MGI SNP Detail
Alliance Variant		 Chr2:62448942 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1148 bp proximal
 SNP A/C C A A A C
rs239233930
MGI SNP Detail
Alliance Variant		 Chr2:62448958 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1132 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48822054
MGI SNP Detail
Alliance Variant		 Chr2:62448978 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1112 bp proximal
 SNP A/T A T T T A
rs46165017
MGI SNP Detail
Alliance Variant		 Chr2:62448984 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1106 bp proximal
 SNP A/T A T T T A
rs246485952
MGI SNP Detail
Alliance Variant		 Chr2:62449015 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1075 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257273927
MGI SNP Detail
Alliance Variant		 Chr2:62449020 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1070 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47245887
MGI SNP Detail
Alliance Variant		 Chr2:62449040 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 1050 bp proximal
 SNP A/G A G A G A
rs50215946
MGI SNP Detail
Alliance Variant		 Chr2:62449107 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 983 bp proximal
 SNP A/T T A T A T
rs28039504
MGI SNP Detail
Alliance Variant		 Chr2:62449124 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 966 bp proximal
 SNP C/T C C T C C T C T T T T T C C C
rs48350038
MGI SNP Detail
Alliance Variant		 Chr2:62449130 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 960 bp proximal
 SNP C/T C T C T C
rs253300453
MGI SNP Detail
Alliance Variant		 Chr2:62449137 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 953 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28039503
MGI SNP Detail
Alliance Variant		 Chr2:62449194 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 896 bp proximal
 SNP A/G G G G G G A G A A A G G A G G G
rs28039502
MGI SNP Detail
Alliance Variant		 Chr2:62449214 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 876 bp proximal
 SNP A/C A C A A A A A A A C C C A A C A A
rs243889262
MGI SNP Detail
Alliance Variant		 Chr2:62449353 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 737 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28039501
MGI SNP Detail
Alliance Variant		 Chr2:62449437 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 653 bp proximal
 SNP C/T C C C C C T C C T T C C T C C C
rs28039500
MGI SNP Detail
Alliance Variant		 Chr2:62449448 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 642 bp proximal
 SNP A/G G A G G G G G G G A A A G G G G G
rs223792865
MGI SNP Detail
Alliance Variant		 Chr2:62449463 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 627 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247805917
MGI SNP Detail
Alliance Variant		 Chr2:62449488 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 602 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28039499
MGI SNP Detail
Alliance Variant		 Chr2:62449552 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 538 bp proximal
 SNP C/T C C T C C T C T T T T T T T C T C C
rs241417869
MGI SNP Detail
Alliance Variant		 Chr2:62449602 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 488 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258942874
MGI SNP Detail
Alliance Variant		 Chr2:62449634 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 456 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215896691
MGI SNP Detail
Alliance Variant		 Chr2:62449730 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 360 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236811090
MGI SNP Detail
Alliance Variant		 Chr2:62449756 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 334 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250884891
MGI SNP Detail
Alliance Variant		 Chr2:62449767 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 323 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29722306
MGI SNP Detail
Alliance Variant		 Chr2:62449834 Ifih1 Intron
Rr557888 within coordinates of
Rr557889 256 bp proximal
 SNP A/G G G A G G A G
rs585690364
MGI SNP Detail
Alliance Variant		 Chr2:62450014 Ifih1 Intron
Rr557889 76 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578723258
MGI SNP Detail
Alliance Variant		 Chr2:62450018 Ifih1 Intron
Rr557889 72 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T G
rs237141680
MGI SNP Detail
Alliance Variant		 Chr2:62450139 Ifih1 Intron
Rr557889 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255262624
MGI SNP Detail
Alliance Variant		 Chr2:62450245 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225757244
MGI SNP Detail
Alliance Variant		 Chr2:62450297 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248782042
MGI SNP Detail
Alliance Variant		 Chr2:62450357 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33291746
MGI SNP Detail
Alliance Variant		 Chr2:62450384 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/C C C A C C A C
rs29619411
MGI SNP Detail
Alliance Variant		 Chr2:62450400 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/C C C A C C A C
rs237760170
MGI SNP Detail
Alliance Variant		 Chr2:62450401 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29817294
MGI SNP Detail
Alliance Variant		 Chr2:62450403 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP C/T C C T C C T C
rs223579680
MGI SNP Detail
Alliance Variant		 Chr2:62450519 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247551850
MGI SNP Detail
Alliance Variant		 Chr2:62450620 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218546505
MGI SNP Detail
Alliance Variant		 Chr2:62450636 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232773297
MGI SNP Detail
Alliance Variant		 Chr2:62450660 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257589213
MGI SNP Detail
Alliance Variant		 Chr2:62450667 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215084338
MGI SNP Detail
Alliance Variant		 Chr2:62450694 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 18 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232468483
MGI SNP Detail
Alliance Variant		 Chr2:62450770 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 94 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251035911
MGI SNP Detail
Alliance Variant		 Chr2:62450773 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 97 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212513560
MGI SNP Detail
Alliance Variant		 Chr2:62450790 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 114 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28039498
MGI SNP Detail
Alliance Variant		 Chr2:62450868 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 192 bp distal
 SNP A/T T T A T A T T A A A A A A T A T
rs33237512
MGI SNP Detail
Alliance Variant		 Chr2:62451145 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 469 bp distal
 SNP A/G A A G
rs33313116
MGI SNP Detail
Alliance Variant		 Chr2:62451194 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 518 bp distal
 SNP A/T T T T A
rs29555319
MGI SNP Detail
Alliance Variant		 Chr2:62451247 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 571 bp distal
 SNP A/G A G A A G A
rs262802256
MGI SNP Detail
Alliance Variant		 Chr2:62451254 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 578 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28039497
MGI SNP Detail
Alliance Variant		 Chr2:62451311 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 635 bp distal
 SNP C/T T T T T T T C T T T T T T T T
rs29526478
MGI SNP Detail
Alliance Variant		 Chr2:62451352 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 676 bp distal
 SNP C/T T T C T T C T
rs254762365
MGI SNP Detail
Alliance Variant		 Chr2:62451371 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 695 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223660792
MGI SNP Detail
Alliance Variant		 Chr2:62451672 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 996 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241629694
MGI SNP Detail
Alliance Variant		 Chr2:62451775 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1099 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264079670
MGI SNP Detail
Alliance Variant		 Chr2:62451790 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1114 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28039496
MGI SNP Detail
Alliance Variant		 Chr2:62451791 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1115 bp distal
 SNP A/G G G A G G G G G G G G A A A G G A G G
rs252704140
MGI SNP Detail
Alliance Variant		 Chr2:62451849 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1173 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265354894
MGI SNP Detail
Alliance Variant		 Chr2:62451897 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1221 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28039495
MGI SNP Detail
Alliance Variant		 Chr2:62452016 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1340 bp distal
 SNP C/G G G G G G G C G G G G G G G G
rs244566750
MGI SNP Detail
Alliance Variant		 Chr2:62452064 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1388 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212641813
MGI SNP Detail
Alliance Variant		 Chr2:62452066 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1390 bp distal
 SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28039494
MGI SNP Detail
Alliance Variant		 Chr2:62452174 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1498 bp distal
 SNP C/T T T C T T T T T T T T C C C T T C T T
rs259726475
MGI SNP Detail
Alliance Variant		 Chr2:62452247 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1571 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217544557
MGI SNP Detail
Alliance Variant		 Chr2:62452254 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1578 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240966354
MGI SNP Detail
Alliance Variant		 Chr2:62452256 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1580 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28039493
MGI SNP Detail
Alliance Variant		 Chr2:62452316 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1640 bp distal
 SNP A/T A A A A A A T A A A A A A A A
rs220040863
MGI SNP Detail
Alliance Variant		 Chr2:62452334 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1658 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28039492
MGI SNP Detail
Alliance Variant		 Chr2:62452436 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1760 bp distal
 SNP A/G G G G G A G G G A A G G G G G
rs248844627
MGI SNP Detail
Alliance Variant		 Chr2:62452470 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1794 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218105057
MGI SNP Detail
Alliance Variant		 Chr2:62452471 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1795 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580509565
MGI SNP Detail
Alliance Variant		 Chr2:62452488 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1812 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28039491
MGI SNP Detail
Alliance Variant		 Chr2:62452490 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1814 bp distal
 SNP C/T T T T T T C T T T T T C T
rs107624003
MGI SNP Detail
Alliance Variant		 Chr2:62452533 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1857 bp distal
 SNP C/G G G C
rs241740775
MGI SNP Detail
Alliance Variant		 Chr2:62452555 Gm39839 within coordinates of
Ifih1 Intron
Rr557889 1879 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 106
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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