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Mouse SNP Summary
Symbol
Name
ID
Rr558458
regulatory region 558458
MGI:8020590

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248335652
MGI SNP Detail
Chr2:69551160 Rr558458 1957 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265488121
MGI SNP Detail
Chr2:69551166 Rr558458 1951 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232462253
MGI SNP Detail
Chr2:69551199 Rr558458 1918 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243856719
MGI SNP Detail
Chr2:69551225 Rr558458 1892 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214475887
MGI SNP Detail
Chr2:69551229 Rr558458 1888 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs223666104
MGI SNP Detail
Chr2:69551249 Rr558458 1868 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243214843
MGI SNP Detail
Chr2:69551355 Rr558458 1762 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218454800
MGI SNP Detail
Chr2:69551359 Rr558458 1758 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243344689
MGI SNP Detail
Chr2:69551371 Rr558458 1746 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259017228
MGI SNP Detail
Chr2:69551406 Rr558458 1711 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217542991
MGI SNP Detail
Chr2:69551407 Rr558458 1710 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232253581
MGI SNP Detail
Chr2:69551429 Rr558458 1688 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs250954878
MGI SNP Detail
Chr2:69551431 Rr558458 1686 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219962469
MGI SNP Detail
Chr2:69551482 Rr558458 1635 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs236999604
MGI SNP Detail
Chr2:69551531 Rr558458 1586 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261345283
MGI SNP Detail
Chr2:69551532 Rr558458 1585 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs225647999
MGI SNP Detail
Chr2:69551549 Rr558458 1568 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251029886
MGI SNP Detail
Chr2:69551565 Rr558458 1552 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263167428
MGI SNP Detail
Chr2:69551620 Rr558458 1497 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233127126
MGI SNP Detail
Chr2:69551621 Rr558458 1496 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237532916
MGI SNP Detail
Chr2:69551632 Rr558458 1485 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs50385054
MGI SNP Detail
Chr2:69551635 Rr558458 1482 bp proximal
SNP T T T T T
rs223543243
MGI SNP Detail
Chr2:69551648 Rr558458 1469 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243250239
MGI SNP Detail
Chr2:69551727 Rr558458 1390 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265959573
MGI SNP Detail
Chr2:69551733 Rr558458 1384 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234132361
MGI SNP Detail
Chr2:69551744 Rr558458 1373 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257657455
MGI SNP Detail
Chr2:69551863 Rr558458 1254 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217076097
MGI SNP Detail
Chr2:69551891 Rr558458 1226 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232313693
MGI SNP Detail
Chr2:69551918 Rr558458 1199 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246056666
MGI SNP Detail
Chr2:69551971 Rr558458 1146 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214111725
MGI SNP Detail
Chr2:69551978 Rr558458 1139 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229631585
MGI SNP Detail
Chr2:69552105 Rr558458 1012 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256061166
MGI SNP Detail
Chr2:69552188 Rr558458 929 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225859324
MGI SNP Detail
Chr2:69552253 Rr558458 864 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240078249
MGI SNP Detail
Chr2:69552255 Rr558458 862 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262855399
MGI SNP Detail
Chr2:69552280 Rr558458 837 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs221342032
MGI SNP Detail
Chr2:69552335 Rr558458 782 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237579328
MGI SNP Detail
Chr2:69552379 Rr558458 738 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584544780
MGI SNP Detail
Chr2:69552557 Rr558458 560 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578974623
MGI SNP Detail
Chr2:69552562 Rr558458 555 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256239965
MGI SNP Detail
Chr2:69552598 Rr558458 519 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218038139
MGI SNP Detail
Chr2:69552841 Rr558457 within coordinates of
Rr558458 276 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245065562
MGI SNP Detail
Chr2:69552878 Rr558457 within coordinates of
Rr558458 239 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264055962
MGI SNP Detail
Alliance Variant
Chr2:69552935 Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 182 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235218671
MGI SNP Detail
Alliance Variant
Chr2:69552946 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 171 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252432302
MGI SNP Detail
Alliance Variant
Chr2:69552968 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 149 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265793870
MGI SNP Detail
Alliance Variant
Chr2:69553035 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 82 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226025732
MGI SNP Detail
Alliance Variant
Chr2:69553042 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 75 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246089014
MGI SNP Detail
Alliance Variant
Chr2:69553049 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 68 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212404433
MGI SNP Detail
Alliance Variant
Chr2:69553057 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 60 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229672796
MGI SNP Detail
Alliance Variant
Chr2:69553098 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 19 bp proximal
Tssr24445 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253649316
MGI SNP Detail
Alliance Variant
Chr2:69553100 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 17 bp proximal
Tssr24445 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs217532352
MGI SNP Detail
Alliance Variant
Chr2:69553134 Cpgi11715 within coordinates of
Ppig Noncoding-Transcript-Variant
Rr397018 within coordinates of
Rr558457 within coordinates of
Rr558458 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs242822342
MGI SNP Detail
Alliance Variant
Chr2:69553257 Cpgi11715 within coordinates of
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 119 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C
rs258395454
MGI SNP Detail
Alliance Variant
Chr2:69553291 Cpgi11715 within coordinates of
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 153 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221363956
MGI SNP Detail
Alliance Variant
Chr2:69553298 Cpgi11715 within coordinates of
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 160 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs231272714
MGI SNP Detail
Alliance Variant
Chr2:69553333 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 195 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs250463018
MGI SNP Detail
Alliance Variant
Chr2:69553374 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 236 bp distal
SNP C/G/T T T T T T T T T T T T T T T T T T T T T G C T T T T C T T T T C T T T T T T C T T T T T T T C T T G T
rs217981671
MGI SNP Detail
Alliance Variant
Chr2:69553375 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 237 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs242149715
MGI SNP Detail
Alliance Variant
Chr2:69553376 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558457 within coordinates of
Rr558458 238 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G
rs586448490
MGI SNP Detail
Alliance Variant
Chr2:69553488 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 350 bp distal
Rr558459 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T T T T T T
rs580369876
MGI SNP Detail
Alliance Variant
Chr2:69553491 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 353 bp distal
Rr558459 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265953040
MGI SNP Detail
Alliance Variant
Chr2:69553562 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 424 bp distal
Rr558459 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226766596
MGI SNP Detail
Alliance Variant
Chr2:69553570 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 432 bp distal
Rr558459 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581972471
MGI SNP Detail
Alliance Variant
Chr2:69553572 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 434 bp distal
Rr558459 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs585108799
MGI SNP Detail
Alliance Variant
Chr2:69553580 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 442 bp distal
Rr558459 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579492142
MGI SNP Detail
Alliance Variant
Chr2:69553651 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 513 bp distal
Rr558459 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248039785
MGI SNP Detail
Alliance Variant
Chr2:69553679 Cpgi11715 within coordinates of
Ppig Intron
Ppig mRNA-UTR
Ppig Noncoding-Transcript-Variant
Rr558458 541 bp distal
Rr558459 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs260067590
MGI SNP Detail
Alliance Variant
Chr2:69553734 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 596 bp distal
Rr558459 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226065288
MGI SNP Detail
Alliance Variant
Chr2:69553849 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Ppig Splice-Site
Rr558458 711 bp distal
Rr558459 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239947593
MGI SNP Detail
Alliance Variant
Chr2:69553875 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 737 bp distal
Rr558459 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256278730
MGI SNP Detail
Alliance Variant
Chr2:69553921 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 783 bp distal
Rr558459 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs229726030
MGI SNP Detail
Alliance Variant
Chr2:69554066 Cpgi11715 within coordinates of
Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 928 bp distal
Rr558459 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254269057
MGI SNP Detail
Alliance Variant
Chr2:69554103 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 965 bp distal
Rr558459 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217736749
MGI SNP Detail
Alliance Variant
Chr2:69554131 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 993 bp distal
Rr558459 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233525710
MGI SNP Detail
Alliance Variant
Chr2:69554137 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 999 bp distal
Rr558459 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32906041
MGI SNP Detail
Alliance Variant
Chr2:69554197 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1059 bp distal
SNP A/G A G A A A
rs215667344
MGI SNP Detail
Alliance Variant
Chr2:69554270 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1132 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231215228
MGI SNP Detail
Alliance Variant
Chr2:69554327 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1189 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250403346
MGI SNP Detail
Alliance Variant
Chr2:69554396 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1258 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211923849
MGI SNP Detail
Alliance Variant
Chr2:69554409 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1271 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33697372
MGI SNP Detail
Alliance Variant
Chr2:69554640 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1502 bp distal
SNP A/G A G A A A
rs227278387
MGI SNP Detail
Alliance Variant
Chr2:69554792 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1654 bp distal
SNP A/G G G G G G G G G G G G G A G G A G G G
rs6275537
MGI SNP Detail
Alliance Variant
Chr2:69554924 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1786 bp distal
SNP A/G G A
rs6275559
MGI SNP Detail
Alliance Variant
Chr2:69554948 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1810 bp distal
SNP G/T G G T G G G G
rs239884219
MGI SNP Detail
Alliance Variant
Chr2:69554992 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1854 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6275652
MGI SNP Detail
Alliance Variant
Chr2:69554996 Ppig Intron
Ppig Noncoding-Transcript-Variant
Rr558458 1858 bp distal
SNP A/G G A
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Showing SNP(s) 1 - 87 of 87

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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