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Mouse SNP Summary
Symbol
Name
ID 		Rr558490
regulatory region 558490
MGI:8020622

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261299658
MGI SNP Detail
Alliance Variant		 Chr2:69714124 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1913 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231815926
MGI SNP Detail
Alliance Variant		 Chr2:69714146 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1891 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249302333
MGI SNP Detail
Alliance Variant		 Chr2:69714256 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1781 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262452546
MGI SNP Detail
Alliance Variant		 Chr2:69714265 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1772 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs581684142
MGI SNP Detail
Alliance Variant		 Chr2:69714365 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1672 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231530425
MGI SNP Detail
Alliance Variant		 Chr2:69714368 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1669 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs49349951
MGI SNP Detail
Alliance Variant		 Chr2:69714369 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1668 bp proximal
 SNP C/G C C C G
rs213300070
MGI SNP Detail
Alliance Variant		 Chr2:69714385 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1652 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580679578
MGI SNP Detail
Alliance Variant		 Chr2:69714416 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1621 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228804067
MGI SNP Detail
Alliance Variant		 Chr2:69714422 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558487 within coordinates of
Rr558490 1615 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584411521
MGI SNP Detail
Alliance Variant		 Chr2:69714427 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558487 within coordinates of
Rr558490 1610 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578702044
MGI SNP Detail
Alliance Variant		 Chr2:69714451 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1586 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246409206
MGI SNP Detail
Alliance Variant		 Chr2:69714472 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1565 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581541010
MGI SNP Detail
Alliance Variant		 Chr2:69714489 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1548 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218654079
MGI SNP Detail
Alliance Variant		 Chr2:69714496 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1541 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27991875
MGI SNP Detail
Alliance Variant		 Chr2:69714573 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1464 bp proximal
 SNP C/T T T T T T T T T T T C T T C T
rs263238572
MGI SNP Detail
Alliance Variant		 Chr2:69714589 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1448 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584953804
MGI SNP Detail
Alliance Variant		 Chr2:69714630 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1407 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578846541
MGI SNP Detail
Alliance Variant		 Chr2:69714645 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1392 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs108509663
MGI SNP Detail
Alliance Variant		 Chr2:69714777 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1260 bp proximal
 SNP G/T G G T G T
rs232700428
MGI SNP Detail
Alliance Variant		 Chr2:69714787 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1250 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs249477605
MGI SNP Detail
Alliance Variant		 Chr2:69714794 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1243 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs582929054
MGI SNP Detail
Alliance Variant		 Chr2:69714841 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1196 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs218854308
MGI SNP Detail
Alliance Variant		 Chr2:69714842 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1195 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241932750
MGI SNP Detail
Alliance Variant		 Chr2:69714879 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1158 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27991874
MGI SNP Detail
Alliance Variant		 Chr2:69714965 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 1072 bp proximal
 SNP C/G C C C C C C C C C C G C C G C
rs224331058
MGI SNP Detail
Alliance Variant		 Chr2:69715052 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 985 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246477559
MGI SNP Detail
Alliance Variant		 Chr2:69715053 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 984 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265129851
MGI SNP Detail
Alliance Variant		 Chr2:69715061 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 976 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs586225969
MGI SNP Detail
Alliance Variant		 Chr2:69715120 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 917 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231063692
MGI SNP Detail
Alliance Variant		 Chr2:69715217 Mettl5 Intron
Mettl5 Noncoding-Transcript-Variant
Rr558490 820 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3657805
MGI SNP Detail
Alliance Variant		 Chr2:69715820 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558490 217 bp proximal
 SNP A/G A G G A
rs254820644
MGI SNP Detail
Alliance Variant		 Chr2:69715839 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558490 198 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27991873
MGI SNP Detail
Alliance Variant		 Chr2:69715852 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558490 185 bp proximal
 SNP C/T C C C C C C C C C C C C C C T
rs247761985
MGI SNP Detail
Alliance Variant		 Chr2:69715909 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558490 128 bp proximal
Tssr24451 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216153216
MGI SNP Detail
Alliance Variant		 Chr2:69715968 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558488 within coordinates of
Rr558490 69 bp proximal
Tssr24451 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231779921
MGI SNP Detail
Alliance Variant		 Chr2:69716009 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558488 within coordinates of
Rr558490 28 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252803203
MGI SNP Detail
Alliance Variant		 Chr2:69716016 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Rr558488 within coordinates of
Rr558490 21 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27991872
MGI SNP Detail
Alliance Variant		 Chr2:69716082 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 within coordinates of
 SNP A/G A A A A A A A A A G A A G A
rs27991871
MGI SNP Detail
Alliance Variant		 Chr2:69716266 Cpgi11720 within coordinates of
Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 within coordinates of
 SNP G/T G G G G G G G G G G G G T G
rs243419247
MGI SNP Detail
Alliance Variant		 Chr2:69716434 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212717622
MGI SNP Detail
Alliance Variant		 Chr2:69716436 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235528403
MGI SNP Detail
Alliance Variant		 Chr2:69716566 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 19 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578496059
MGI SNP Detail
Alliance Variant		 Chr2:69716578 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 31 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27991870
MGI SNP Detail
Alliance Variant		 Chr2:69716645 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 98 bp distal
 SNP C/T C T T T C C C C C T T T C T C C C C
rs224181910
MGI SNP Detail
Alliance Variant		 Chr2:69716661 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 114 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241230390
MGI SNP Detail
Alliance Variant		 Chr2:69716706 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 159 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27991869
MGI SNP Detail
Alliance Variant		 Chr2:69716778 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 231 bp distal
 SNP C/T T T T T C C C C T T T T C T C
rs220190927
MGI SNP Detail
Alliance Variant		 Chr2:69716957 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 410 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs236020109
MGI SNP Detail
Alliance Variant		 Chr2:69717116 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 569 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254882958
MGI SNP Detail
Alliance Variant		 Chr2:69717157 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 610 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222217374
MGI SNP Detail
Alliance Variant		 Chr2:69717208 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 661 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248614522
MGI SNP Detail
Alliance Variant		 Chr2:69717224 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 677 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265615817
MGI SNP Detail
Alliance Variant		 Chr2:69717268 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 721 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232715902
MGI SNP Detail
Alliance Variant		 Chr2:69717296 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 749 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243284301
MGI SNP Detail
Alliance Variant		 Chr2:69717343 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 796 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212622997
MGI SNP Detail
Alliance Variant		 Chr2:69717361 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 814 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235465672
MGI SNP Detail
Alliance Variant		 Chr2:69717399 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 852 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254582776
MGI SNP Detail
Alliance Variant		 Chr2:69717424 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 877 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216153677
MGI SNP Detail
Alliance Variant		 Chr2:69717484 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 937 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238610834
MGI SNP Detail
Alliance Variant		 Chr2:69717495 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 948 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262071172
MGI SNP Detail
Alliance Variant		 Chr2:69717507 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 960 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220060373
MGI SNP Detail
Alliance Variant		 Chr2:69717523 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 976 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581828817
MGI SNP Detail
Alliance Variant		 Chr2:69717527 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 980 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230048007
MGI SNP Detail
Alliance Variant		 Chr2:69717714 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1167 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249095188
MGI SNP Detail
Alliance Variant		 Chr2:69717802 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1255 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585540279
MGI SNP Detail
Alliance Variant		 Chr2:69717827 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1280 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579844378
MGI SNP Detail
Alliance Variant		 Chr2:69717875 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1328 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222095985
MGI SNP Detail
Alliance Variant		 Chr2:69717940 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1393 bp distal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583326904
MGI SNP Detail
Alliance Variant		 Chr2:69717944 Mettl5 mRNA-UTR
Mettl5 Noncoding-Transcript-Variant
Mettl5os within coordinates of
Rr558490 1397 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251790638
MGI SNP Detail		 Chr2:69717960 Mettl5os within coordinates of
Rr558490 1413 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263294847
MGI SNP Detail		 Chr2:69717964 Mettl5os within coordinates of
Rr558490 1417 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586161001
MGI SNP Detail		 Chr2:69717999 Mettl5os within coordinates of
Rr558490 1452 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246302492
MGI SNP Detail		 Chr2:69718004 Mettl5os within coordinates of
Rr558490 1457 bp distal
 SNP C/T T C
rs243577885
MGI SNP Detail		 Chr2:69718005 Mettl5os within coordinates of
Rr558490 1458 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257245935
MGI SNP Detail		 Chr2:69718107 Mettl5os within coordinates of
Rr558490 1560 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265889195
MGI SNP Detail		 Chr2:69718126 Mettl5os within coordinates of
Rr558490 1579 bp distal
 SNP G/T T G
rs236862884
MGI SNP Detail		 Chr2:69718149 Mettl5os within coordinates of
Rr558490 1602 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256597822
MGI SNP Detail		 Chr2:69718291 Mettl5os within coordinates of
Rr558490 1744 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs587420624
MGI SNP Detail		 Chr2:69718461 Mettl5os within coordinates of
Rr558490 1914 bp distal
 SNP A/G A A A G G G A A A A G A G A G A A G G G A G G
rs579662322
MGI SNP Detail		 Chr2:69718465 Mettl5os within coordinates of
Rr558490 1918 bp distal
 SNP A/G A A A G A A A A A A A A A A A
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Showing SNP(s) 1 - 81 of 81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory