About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr558673
regulatory region 558673
MGI:8020805

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 115

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251298884
MGI SNP Detail
Chr2:70933106 Rr558673 1996 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221457661
MGI SNP Detail
Chr2:70933116 Rr558673 1986 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236600814
MGI SNP Detail
Chr2:70933126 Rr558673 1976 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584056541
MGI SNP Detail
Chr2:70933297 Rr558673 1805 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs27971720
MGI SNP Detail
Chr2:70933318 Rr558673 1784 bp proximal
SNP A/G G G A A G G A G A G A A A A G
rs27971719
MGI SNP Detail
Chr2:70933327 Rr558673 1775 bp proximal
SNP A/G A A G A A G A G G G G G A
rs49600103
MGI SNP Detail
Chr2:70933342 Rr558673 1760 bp proximal
SNP C/G G C G C C
rs27971718
MGI SNP Detail
Chr2:70933350 Rr558673 1752 bp proximal
SNP C/T T T C C C C C C C C C C C C T
rs222469983
MGI SNP Detail
Chr2:70933361 Rr558673 1741 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586771460
MGI SNP Detail
Chr2:70933395 Rr558673 1707 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C G C C C C
rs242512125
MGI SNP Detail
Chr2:70933464 Rr558673 1638 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258795842
MGI SNP Detail
Chr2:70933488 Rr558673 1614 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227814316
MGI SNP Detail
Chr2:70933491 Rr558673 1611 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212620697
MGI SNP Detail
Chr2:70933503 Rr558673 1599 bp proximal
SNP T T T
rs265273550
MGI SNP Detail
Chr2:70933520 Rr558673 1582 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45936855
MGI SNP Detail
Chr2:70933521 Rr558673 1581 bp proximal
SNP A/G A G A G G
rs27971717
MGI SNP Detail
Chr2:70933584 Rr558673 1518 bp proximal
SNP A/G G G G G G G G G G A G G G G
rs27971716
MGI SNP Detail
Chr2:70933598 Rr558673 1504 bp proximal
SNP A/C A C C A A C C A C C C C C C C A
rs215764296
MGI SNP Detail
Chr2:70933647 Rr558673 1455 bp proximal
SNP T T T
rs27971715
MGI SNP Detail
Chr2:70933655 Rr558673 1447 bp proximal
SNP A/T A T T A A T T A T T T T A
rs27971714
MGI SNP Detail
Chr2:70933677 Rr558673 1425 bp proximal
SNP A/C A A C C A A C C A C C C C C C C C A
rs27971713
MGI SNP Detail
Chr2:70933714 Rr397033 within coordinates of
Rr558673 1388 bp proximal
SNP A/G A G G A A G G A G G G G G G A
rs581374744
MGI SNP Detail
Chr2:70933733 Rr397033 within coordinates of
Rr558673 1369 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27971712
MGI SNP Detail
Chr2:70933753 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1349 bp proximal
SNP C/T T C C T T C C T C C C C C C T
rs584534808
MGI SNP Detail
Chr2:70933767 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1335 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27971711
MGI SNP Detail
Chr2:70933781 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1321 bp proximal
SNP A/T T A A T T A A T A A T A A A A T
rs27971710
MGI SNP Detail
Chr2:70933843 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1259 bp proximal
SNP C/T T T C C T T C C T C C C C C C C T
rs27971709
MGI SNP Detail
Chr2:70933865 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1237 bp proximal
SNP A/G G G A A G G A A G A A A A A G
rs27971708
MGI SNP Detail
Chr2:70933885 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1217 bp proximal
SNP C/T C C T T C C T T C T T T T T T C
rs27971707
MGI SNP Detail
Chr2:70933953 Rr397033 within coordinates of
Rr558671 within coordinates of
Rr558673 1149 bp proximal
SNP A/G A A G G A A G G A G G G G G G A
rs27971706
MGI SNP Detail
Chr2:70934005 Rr558673 1097 bp proximal
SNP C/T T T C C T T C C T C C C C C C C T
rs242590927
MGI SNP Detail
Chr2:70934070 Rr558673 1032 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs47063775
MGI SNP Detail
Chr2:70934088 Rr558673 1014 bp proximal
SNP C C C
rs224690088
MGI SNP Detail
Chr2:70934126 Rr558673 976 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259393285
MGI SNP Detail
Chr2:70934155 Rr558673 947 bp proximal
SNP T T T
rs49995660
MGI SNP Detail
Chr2:70934197 Rr558673 905 bp proximal
SNP C C C
rs27971705
MGI SNP Detail
Chr2:70934233 Rr558673 869 bp proximal
SNP A/G A A G G A A G G A G G G G G G G A
rs27971704
MGI SNP Detail
Chr2:70934270 Rr558673 832 bp proximal
SNP C/T C T T C C T T C T T T T T T C
rs50577860
MGI SNP Detail
Chr2:70934330 Rr558673 772 bp proximal
SNP G/T G T T T
rs49310338
MGI SNP Detail
Chr2:70934360 Rr558673 742 bp proximal
SNP G/T G T T T
rs27971703
MGI SNP Detail
Chr2:70934378 Rr558673 724 bp proximal
SNP C/T T C C T T C C T C C C C C C C T
rs27971702
MGI SNP Detail
Chr2:70934484 Rr558673 618 bp proximal
SNP C/G C G G C C G G C G G G G G G G C
rs27971701
MGI SNP Detail
Chr2:70934513 Rr558673 589 bp proximal
SNP A/C C A A C C A A C A A A A A A A C
rs256397567
MGI SNP Detail
Chr2:70934537 Rr558673 565 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27971700
MGI SNP Detail
Chr2:70934598 Rr558673 504 bp proximal
SNP C/T T C C T T C C T C C C C C C C T
rs237545295
MGI SNP Detail
Chr2:70934618 Rr558673 484 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27971699
MGI SNP Detail
Chr2:70934628 Rr558673 474 bp proximal
SNP A/G A G G A A G G A G G A G G G G G A
rs51027554
MGI SNP Detail
Chr2:70934657 Rr558673 445 bp proximal
SNP A/G G A
rs221893435
MGI SNP Detail
Chr2:70934662 Rr558673 440 bp proximal
SNP A/G A G
rs586962681
MGI SNP Detail
Chr2:70934667 Rr558673 435 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234238837
MGI SNP Detail
Chr2:70934690 Rr558673 412 bp proximal
SNP C/T C C C T T C C C C T T T C C C C C C C T C C T C C T T T T C T C T T T C C C T C T T T C T C C C C C C C
rs49331745
MGI SNP Detail
Chr2:70934735 Rr558673 367 bp proximal
SNP C/T T C T C C
rs224934976
MGI SNP Detail
Chr2:70934750 Rr558673 352 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51094595
MGI SNP Detail
Chr2:70934770 Rr558673 332 bp proximal
SNP A/G A G A
rs47819114
MGI SNP Detail
Chr2:70934831 Rr558673 271 bp proximal
SNP A/G A G
rs46958073
MGI SNP Detail
Chr2:70934871 Rr558673 231 bp proximal
SNP A/T A T
rs27971698
MGI SNP Detail
Chr2:70934959 Rr558673 143 bp proximal
SNP A/G A G G A A G A A G A G G G G G A
rs50700608
MGI SNP Detail
Chr2:70934995 Rr558673 107 bp proximal
SNP A/G A G A A
rs222589059
MGI SNP Detail
Chr2:70935001 Rr558673 101 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs48927215
MGI SNP Detail
Chr2:70935007 Rr558673 95 bp proximal
SNP G/T G T G G
rs27971697
MGI SNP Detail
Chr2:70935100 Rr558673 2 bp proximal
SNP A/G A G G A A G G A G G G G G G A
rs230431568
MGI SNP Detail
Chr2:70935147 Rr558673 within coordinates of
SNP A/G G G A A G G G G A A A G G G G G G G A G G A G G A A A G G A G A A A G G G A G A A A G A G G A A G G G G
rs580685983
MGI SNP Detail
Chr2:70935149 Rr558673 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46580233
MGI SNP Detail
Chr2:70935211 Rr558673 within coordinates of
SNP C/T T C T T
rs50905197
MGI SNP Detail
Chr2:70935213 Rr558673 within coordinates of
SNP A/G A G A A
rs47526989
MGI SNP Detail
Chr2:70935224 Rr558673 within coordinates of
SNP A/T A T A T T
rs27971696
MGI SNP Detail
Chr2:70935280 Rr558673 within coordinates of
SNP C/T T C C C C C C C C C C C C C C
rs27971695
MGI SNP Detail
Chr2:70935341 Rr558673 within coordinates of
SNP G/T T T T T T T T T T T T G
rs49847076
MGI SNP Detail
Chr2:70935342 Rr558673 within coordinates of
SNP C C C
rs584305303
MGI SNP Detail
Chr2:70935353 Rr558673 5 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247515523
MGI SNP Detail
Chr2:70935398 Rr558673 50 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214092411
MGI SNP Detail
Chr2:70935436 Rr558673 88 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237828775
MGI SNP Detail
Chr2:70935563 Rr558673 215 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578526616
MGI SNP Detail
Chr2:70935637 Rr558673 289 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52102177
MGI SNP Detail
Chr2:70935731 Rr558673 383 bp distal
SNP C/T T C C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52521145
MGI SNP Detail
Chr2:70935737 Rr558673 389 bp distal
SNP G/T T G T G G
rs230406193
MGI SNP Detail
Chr2:70935744 Rr558673 396 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52226615
MGI SNP Detail
Chr2:70935756 Rr558673 408 bp distal
SNP C/T C T C T
rs107773857
MGI SNP Detail
Chr2:70935777 Rr558673 429 bp distal
SNP A/G A G G G
rs239158871
MGI SNP Detail
Chr2:70935802 Rr558673 454 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265684535
MGI SNP Detail
Chr2:70935803 Rr558673 455 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27971694
MGI SNP Detail
Chr2:70935861 Rr558673 513 bp distal
SNP A/T T T A A T T A A T A T A A A A A A T
rs247133753
MGI SNP Detail
Chr2:70935895 Rr558673 547 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45880828
MGI SNP Detail
Chr2:70935931 Rr558673 583 bp distal
SNP A/G A G A G G
rs46267747
MGI SNP Detail
Chr2:70935936 Rr558673 588 bp distal
SNP A/G G A G A A
rs48188301
MGI SNP Detail
Chr2:70935949 Rr558673 601 bp distal
SNP C/T T C T C C
rs27971693
MGI SNP Detail
Chr2:70935980 Rr558673 632 bp distal
SNP A/G G G A A G G A A G A G A A A A A G
rs227742357
MGI SNP Detail
Chr2:70936044 Rr558673 696 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247604789
MGI SNP Detail
Chr2:70936052 Rr558673 704 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs214575337
MGI SNP Detail
Chr2:70936091 Rr558673 743 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs108106287
MGI SNP Detail
Chr2:70936097 Rr558673 749 bp distal
SNP A/G A G G
rs107981302
MGI SNP Detail
Chr2:70936103 Rr558673 755 bp distal
SNP C/G C G G
rs211852498
MGI SNP Detail
Chr2:70936128 Rr558673 780 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230484872
MGI SNP Detail
Chr2:70936169 Rr558673 821 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252380797
MGI SNP Detail
Chr2:70936297 Rr558673 949 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217061185
MGI SNP Detail
Chr2:70936320 Rr558673 972 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232868958
MGI SNP Detail
Chr2:70936385 Rr558673 1037 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259439383
MGI SNP Detail
Chr2:70936415 Rr558673 1067 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221992746
MGI SNP Detail
Chr2:70936434 Rr558673 1086 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T
rs27971692
MGI SNP Detail
Chr2:70936534 Rr558673 1186 bp distal
SNP A/G A G A G G
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 115

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...