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Mouse SNP Summary
Symbol
Name
ID
Rr558862
regulatory region 558862
MGI:8020994

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583545532
MGI SNP Detail
Alliance Variant
Chr2:71726828 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1932 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251819292
MGI SNP Detail
Alliance Variant
Chr2:71726837 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1923 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213634721
MGI SNP Detail
Alliance Variant
Chr2:71726838 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1922 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232141284
MGI SNP Detail
Alliance Variant
Chr2:71726882 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1878 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260852119
MGI SNP Detail
Alliance Variant
Chr2:71726883 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1877 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221116442
MGI SNP Detail
Alliance Variant
Chr2:71726889 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1871 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249734223
MGI SNP Detail
Alliance Variant
Chr2:71726993 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1767 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260717311
MGI SNP Detail
Alliance Variant
Chr2:71727008 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1752 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220791689
MGI SNP Detail
Alliance Variant
Chr2:71727143 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1617 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241529201
MGI SNP Detail
Alliance Variant
Chr2:71727159 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1601 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs27983359
MGI SNP Detail
Alliance Variant
Chr2:71727169 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1591 bp proximal
SNP A/G G G A A A A G G G G A G A A A G G G G
rs226804972
MGI SNP Detail
Alliance Variant
Chr2:71727180 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1580 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241710317
MGI SNP Detail
Alliance Variant
Chr2:71727199 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1561 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264956816
MGI SNP Detail
Alliance Variant
Chr2:71727209 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1551 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233194053
MGI SNP Detail
Alliance Variant
Chr2:71727268 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1492 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260235299
MGI SNP Detail
Alliance Variant
Chr2:71727273 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1487 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27983358
MGI SNP Detail
Alliance Variant
Chr2:71727355 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1405 bp proximal
SNP A/G A G G G G A A G A G A G G G A G A A
rs227699380
MGI SNP Detail
Alliance Variant
Chr2:71727458 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1302 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234379119
MGI SNP Detail
Alliance Variant
Chr2:71727467 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1293 bp proximal
SNP A/G A G
rs213553961
MGI SNP Detail
Alliance Variant
Chr2:71727553 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1207 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232015186
MGI SNP Detail
Alliance Variant
Chr2:71727565 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1195 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27983357
MGI SNP Detail
Alliance Variant
Chr2:71727601 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1159 bp proximal
SNP A/G G G G G G A A G A G A G G G A G A A
rs213167585
MGI SNP Detail
Alliance Variant
Chr2:71727605 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1155 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239164024
MGI SNP Detail
Alliance Variant
Chr2:71727636 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1124 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27983356
MGI SNP Detail
Alliance Variant
Chr2:71727682 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 1078 bp proximal
SNP C/T C C C C C T T C T C T C C C T C T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220710403
MGI SNP Detail
Alliance Variant
Chr2:71727791 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 969 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C A
rs27983355
MGI SNP Detail
Alliance Variant
Chr2:71727811 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 949 bp proximal
SNP C/T T T T T T C T C T C T T T C T C C
rs251011241
MGI SNP Detail
Alliance Variant
Chr2:71727918 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 842 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220581439
MGI SNP Detail
Alliance Variant
Chr2:71727934 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 826 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244313004
MGI SNP Detail
Alliance Variant
Chr2:71727951 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 809 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262153442
MGI SNP Detail
Alliance Variant
Chr2:71727981 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 779 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226610049
MGI SNP Detail
Alliance Variant
Chr2:71728020 Pdk1 Coding-Synonymous
Pdk1 Noncoding-Transcript-Variant
Rr558862 740 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33314536
MGI SNP Detail
Alliance Variant
Chr2:71728112 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Pdk1 Splice-Site
Rr558862 648 bp proximal
SNP C/G G C C C
rs33189283
MGI SNP Detail
Alliance Variant
Chr2:71728120 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 640 bp proximal
SNP C/T T C C C
rs29670626
MGI SNP Detail
Alliance Variant
Chr2:71728179 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 581 bp proximal
SNP A/G A G G G
rs29868791
MGI SNP Detail
Alliance Variant
Chr2:71728187 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 573 bp proximal
SNP A/T T A T T A T
rs256498953
MGI SNP Detail
Alliance Variant
Chr2:71728217 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 543 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579677130
MGI SNP Detail
Alliance Variant
Chr2:71728237 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 523 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs230790015
MGI SNP Detail
Alliance Variant
Chr2:71728289 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 471 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583937125
MGI SNP Detail
Alliance Variant
Chr2:71728304 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 456 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29624447
MGI SNP Detail
Alliance Variant
Chr2:71728416 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 344 bp proximal
SNP A/C C A A C A
rs242096840
MGI SNP Detail
Alliance Variant
Chr2:71728419 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 341 bp proximal
SNP C/T T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254668879
MGI SNP Detail
Alliance Variant
Chr2:71728452 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 308 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27983354
MGI SNP Detail
Alliance Variant
Chr2:71728455 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 305 bp proximal
SNP A/C C A A A A A A A A A A A A A A
rs234442565
MGI SNP Detail
Alliance Variant
Chr2:71728457 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 303 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251025628
MGI SNP Detail
Alliance Variant
Chr2:71728554 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 206 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T
rs220022632
MGI SNP Detail
Alliance Variant
Chr2:71728557 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 203 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27983353
MGI SNP Detail
Alliance Variant
Chr2:71728562 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 198 bp proximal
SNP A/C A A A A C C C A A A C A C C
rs261694779
MGI SNP Detail
Alliance Variant
Chr2:71728631 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 129 bp proximal
SNP A/G A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226052370
MGI SNP Detail
Alliance Variant
Chr2:71728669 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 91 bp proximal
SNP G/T G G G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251901659
MGI SNP Detail
Alliance Variant
Chr2:71728673 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 87 bp proximal
SNP G/T T T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257640964
MGI SNP Detail
Alliance Variant
Chr2:71728682 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 78 bp proximal
SNP C/T T T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584762738
MGI SNP Detail
Alliance Variant
Chr2:71728717 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 43 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578296682
MGI SNP Detail
Alliance Variant
Chr2:71728733 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 27 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580840520
MGI SNP Detail
Alliance Variant
Chr2:71728752 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 8 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221513359
MGI SNP Detail
Alliance Variant
Chr2:71728757 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 3 bp proximal
SNP A/G G G G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51706475
MGI SNP Detail
Alliance Variant
Chr2:71728767 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP C/T C T C T
rs256517050
MGI SNP Detail
Alliance Variant
Chr2:71728774 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228412426
MGI SNP Detail
Alliance Variant
Chr2:71728776 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49518350
MGI SNP Detail
Alliance Variant
Chr2:71728816 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A A A
rs264836600
MGI SNP Detail
Alliance Variant
Chr2:71728842 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP G/T T T T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48367986
MGI SNP Detail
Alliance Variant
Chr2:71728851 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/C C A C A
rs248824775
MGI SNP Detail
Alliance Variant
Chr2:71728868 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215118586
MGI SNP Detail
Alliance Variant
Chr2:71728869 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51977466
MGI SNP Detail
Alliance Variant
Chr2:71728916 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP C C C
rs244679370
MGI SNP Detail
Alliance Variant
Chr2:71728935 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214196893
MGI SNP Detail
Alliance Variant
Chr2:71728953 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27983352
MGI SNP Detail
Alliance Variant
Chr2:71728956 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP G/T G T T T T T T T T T T
rs256025764
MGI SNP Detail
Alliance Variant
Chr2:71728978 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218508106
MGI SNP Detail
Alliance Variant
Chr2:71729034 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49212381
MGI SNP Detail
Alliance Variant
Chr2:71729049 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP C/T T C C
rs251574174
MGI SNP Detail
Alliance Variant
Chr2:71729089 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49848017
MGI SNP Detail
Alliance Variant
Chr2:71729223 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 69 bp distal
SNP A/G G A A
rs237676163
MGI SNP Detail
Alliance Variant
Chr2:71729267 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 113 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250517226
MGI SNP Detail
Alliance Variant
Chr2:71729307 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 153 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220485910
MGI SNP Detail
Alliance Variant
Chr2:71729322 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 168 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245288394
MGI SNP Detail
Alliance Variant
Chr2:71729462 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 308 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264105328
MGI SNP Detail
Alliance Variant
Chr2:71729490 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 336 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27983351
MGI SNP Detail
Alliance Variant
Chr2:71729545 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 391 bp distal
SNP C/T T C C C C T C T T C C C T C T T
rs50024246
MGI SNP Detail
Alliance Variant
Chr2:71729547 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 393 bp distal
SNP G/T T G T G
rs27983350
MGI SNP Detail
Alliance Variant
Chr2:71729602 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 448 bp distal
SNP A/G G A A A G G G A G A A A G G G G
rs228063374
MGI SNP Detail
Alliance Variant
Chr2:71729620 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 466 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27983349
MGI SNP Detail
Alliance Variant
Chr2:71729688 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 534 bp distal
SNP C/T T C C C T C T C T C C C T C T T
rs214786755
MGI SNP Detail
Alliance Variant
Chr2:71729705 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 551 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6166114
MGI SNP Detail
Alliance Variant
Chr2:71729782 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 628 bp distal
SNP A/T T A T A T A T
rs6166622
MGI SNP Detail
Alliance Variant
Chr2:71729850 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 696 bp distal
SNP C/T T C T C T C T
rs47258391
MGI SNP Detail
Alliance Variant
Chr2:71729859 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 705 bp distal
SNP A/G G A G A G
rs6166662
MGI SNP Detail
Alliance Variant
Chr2:71729867 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 713 bp distal
SNP C/G G C G C G C G
rs251456985
MGI SNP Detail
Alliance Variant
Chr2:71729880 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 726 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6166704
MGI SNP Detail
Alliance Variant
Chr2:71729895 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 741 bp distal
SNP G/T T G T G T G T
rs231778217
MGI SNP Detail
Alliance Variant
Chr2:71729938 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 784 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250842778
MGI SNP Detail
Alliance Variant
Chr2:71729955 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 801 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6167199
MGI SNP Detail
Alliance Variant
Chr2:71729971 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 817 bp distal
SNP A/G A G A G A G A
rs585064538
MGI SNP Detail
Alliance Variant
Chr2:71730010 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 856 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6167701
MGI SNP Detail
Alliance Variant
Chr2:71730039 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 885 bp distal
SNP A/T A A T T T T A A T T A A T T T A T A A
rs263852252
MGI SNP Detail
Alliance Variant
Chr2:71730058 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 904 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6167752
MGI SNP Detail
Alliance Variant
Chr2:71730064 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 910 bp distal
SNP G/T T T G G G G T T G G T T G G G T G T T
rs6167794
MGI SNP Detail
Alliance Variant
Chr2:71730094 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 940 bp distal
SNP A/T T T A A A T T A A T A T A A A T A T T
rs259004288
MGI SNP Detail
Alliance Variant
Chr2:71730111 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 957 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227977607
MGI SNP Detail
Alliance Variant
Chr2:71730138 Pdk1 Intron
Pdk1 Noncoding-Transcript-Variant
Rr558862 984 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 125

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory