Rr558928 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr558928
regulatory region 558928
MGI:8021060

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Showing SNP(s) 1 - 96 of 96

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs241666221 MGI SNP Detail Alliance Variant	Chr2:72025395	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1985 bp proximal	SNP	C/G																																C																		G
rs232991378 MGI SNP Detail Alliance Variant	Chr2:72025429	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1951 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27968814 MGI SNP Detail Alliance Variant	Chr2:72025436	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1944 bp proximal	SNP	A/C		C			C	C		C		C			C								A					C	C			C					C	C				C														C
rs582118387 MGI SNP Detail Alliance Variant	Chr2:72025461	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1919 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs585463019 MGI SNP Detail Alliance Variant	Chr2:72025487	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1893 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs27968813 MGI SNP Detail Alliance Variant	Chr2:72025563	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1817 bp proximal	SNP	A/G		A			G	G		G		G			A								G					A	G			A					G	G				A		A												A
rs227505305 MGI SNP Detail Alliance Variant	Chr2:72025580	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1800 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs243523240 MGI SNP Detail Alliance Variant	Chr2:72025607	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1773 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs214049895 MGI SNP Detail Alliance Variant	Chr2:72025700	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1680 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27968812 MGI SNP Detail Alliance Variant	Chr2:72025733	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1647 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A														A
rs249646058 MGI SNP Detail Alliance Variant	Chr2:72025745	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1635 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs218489344 MGI SNP Detail Alliance Variant	Chr2:72025762	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1618 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27968811 MGI SNP Detail Alliance Variant	Chr2:72025777	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1603 bp proximal	SNP	A/G		G		G	A	A		A		A			G								G					G	A			G					A	A				G
rs263136813 MGI SNP Detail Alliance Variant	Chr2:72025809	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1571 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs261010173 MGI SNP Detail Alliance Variant	Chr2:72025826	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1554 bp proximal	SNP	C/T																																T																		C
rs222227013 MGI SNP Detail Alliance Variant	Chr2:72025833	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1547 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs217900876 MGI SNP Detail Alliance Variant	Chr2:72025911	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1469 bp proximal	SNP	A/G																																A																		G
rs578823883 MGI SNP Detail Alliance Variant	Chr2:72025914	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1466 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs581724042 MGI SNP Detail Alliance Variant	Chr2:72025926	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1454 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs27968810 MGI SNP Detail Alliance Variant	Chr2:72025969	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1411 bp proximal	SNP	C/G		C			C	C		C		C			C								G					C	C			C					C	C				C														C
rs218201620 MGI SNP Detail Alliance Variant	Chr2:72026117	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1263 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs245274854 MGI SNP Detail Alliance Variant	Chr2:72026173	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1207 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs264106334 MGI SNP Detail Alliance Variant	Chr2:72026221	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1159 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs226103248 MGI SNP Detail Alliance Variant	Chr2:72026235	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1145 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		C	G	G	G	G	G	G	G	G	G	G	G	G
rs27968809 MGI SNP Detail Alliance Variant	Chr2:72026241	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1139 bp proximal	SNP	C/T		T		T	C	C		C		C			T								C					T	C			T					C	C				T														T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs585582914 MGI SNP Detail Alliance Variant	Chr2:72026269	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1111 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27968808 MGI SNP Detail Alliance Variant	Chr2:72026326	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1054 bp proximal	SNP	C/G		G			C	C		C		C			G								C					G	C			G					C	C				G														G
rs27968807 MGI SNP Detail Alliance Variant	Chr2:72026392	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 988 bp proximal	SNP	C/G		C		C	G	G		G		G			C								C					C	G			C					G	G				C														C
rs238013415 MGI SNP Detail Alliance Variant	Chr2:72026416	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 964 bp proximal	SNP	C/T																																C																		T
rs243775996 MGI SNP Detail Alliance Variant	Chr2:72026445	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 935 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27968806 MGI SNP Detail Alliance Variant	Chr2:72026465	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 915 bp proximal	SNP	C/T		C		C	T	T		T		T			C								C					C	T			C					T	T				C		C												C
rs49993359 MGI SNP Detail Alliance Variant	Chr2:72026473	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 907 bp proximal	SNP	A/G				A	G																					A
rs27968805 MGI SNP Detail Alliance Variant	Chr2:72026476	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 904 bp proximal	SNP	A/C/T		A		A	C			T		T			A								A					A	T			A										A														A
rs27968804 MGI SNP Detail Alliance Variant	Chr2:72026487	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 893 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs27968803 MGI SNP Detail Alliance Variant	Chr2:72026502	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 878 bp proximal	SNP	A/G		G		G	A	A		A		A			G								G					G	A			G					A	A				G		G												G
rs252582229 MGI SNP Detail Alliance Variant	Chr2:72026519	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 861 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs216150026 MGI SNP Detail Alliance Variant	Chr2:72026522	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 858 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs232300404 MGI SNP Detail Alliance Variant	Chr2:72026693	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 687 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		T	G	G	G	G
rs252396347 MGI SNP Detail Alliance Variant	Chr2:72026728	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 652 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C		C	C	C	C	C
rs51415615 MGI SNP Detail Alliance Variant	Chr2:72026729	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 651 bp proximal	SNP	A/G				G	A																					G
rs235511266 MGI SNP Detail Alliance Variant	Chr2:72026781	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 599 bp proximal	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T			T	T	T	T
rs263764670 MGI SNP Detail Alliance Variant	Chr2:72026782	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 598 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		T	A	A	A	A
rs226934777 MGI SNP Detail Alliance Variant	Chr2:72026791	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 589 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs247961041 MGI SNP Detail Alliance Variant	Chr2:72026911	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 469 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs49150206 MGI SNP Detail Alliance Variant	Chr2:72026917	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 463 bp proximal	SNP	A/G				A	G																					A
rs27968802 MGI SNP Detail Alliance Variant	Chr2:72026950	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 430 bp proximal	SNP	A/G		G		G	A	A		A		A			G								A					G	A			G					A	A				G		G												G
rs27968801 MGI SNP Detail Alliance Variant	Chr2:72026986	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 394 bp proximal	SNP	A/C		C		C	A	A		A		A			C								C					C	A			C					A	A				C		C												C
rs256263528 MGI SNP Detail Alliance Variant	Chr2:72027017	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 363 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs227798389 MGI SNP Detail Alliance Variant	Chr2:72027021	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 359 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs47459781 MGI SNP Detail Alliance Variant	Chr2:72027146	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558927 within coordinates of Rr558928 234 bp proximal	SNP	A/G					A																					G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs27968800 MGI SNP Detail Alliance Variant	Chr2:72027215	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 165 bp proximal	SNP	C/T		T			C	C		C		C			T			T					C					T	C			T					C	C				T														T
rs580348905 MGI SNP Detail Alliance Variant	Chr2:72027238	Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 142 bp proximal	SNP	A/G	G	G	G		A	A	G	A	A	A	A	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	A	A	G	G	G	A	A	A	A	G	A	G	G	A		G	A	A	G	G	A	G	G	G	A	G	G	G
rs233673391 MGI SNP Detail Alliance Variant	Chr2:72027245	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 135 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs246226052 MGI SNP Detail Alliance Variant	Chr2:72027246	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 134 bp proximal	SNP	G/T	G	G	G				G					G	G	G	G	G	G	G	G	G		G	G		G	G				G	G	G					G		G	G			G			G	G		G	G	T		G	G	G
rs216222275 MGI SNP Detail Alliance Variant	Chr2:72027311	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 69 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs27968799 MGI SNP Detail Alliance Variant	Chr2:72027334	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 46 bp proximal	SNP	A/G		A		A	G	G		G		G			A								G					A	G			A					G	G				A														A
rs49450172 MGI SNP Detail Alliance Variant	Chr2:72027364	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 16 bp proximal	SNP	A/T				A	T																					A
rs50321866 MGI SNP Detail Alliance Variant	Chr2:72027365	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 15 bp proximal	SNP	G/T				G	T																					G
rs246115970 MGI SNP Detail Alliance Variant	Chr2:72027371	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 9 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs51581618 MGI SNP Detail Alliance Variant	Chr2:72027382	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 within coordinates of	SNP	A/C					A																					C
rs27968798 MGI SNP Detail Alliance Variant	Chr2:72027413	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 within coordinates of	SNP	A/G		A			G	G		G		G			A								G					A	G			A					G	G				A														A
rs27968797 MGI SNP Detail Alliance Variant	Chr2:72027459	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 within coordinates of	SNP	C/T		T			C	C		C		C			T								C					T	C			T					C	C				T		T												T
rs219146940 MGI SNP Detail Alliance Variant	Chr2:72027664	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs580225430 MGI SNP Detail Alliance Variant	Chr2:72027856	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 132 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs265073943 MGI SNP Detail Alliance Variant	Chr2:72027863	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 139 bp distal	SNP	A/C																																A																		C
rs32818683 MGI SNP Detail Alliance Variant	Chr2:72027892	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 168 bp distal	SNP	G/T				G	T											G										G
rs237410319 MGI SNP Detail Alliance Variant	Chr2:72027901	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 177 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs33439668 MGI SNP Detail Alliance Variant	Chr2:72027905	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 181 bp distal	SNP	C/T				T	C											T										T
rs220391444 MGI SNP Detail Alliance Variant	Chr2:72028003	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 279 bp distal	SNP	A/G	G	G			G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G		G	G	A	G	G	G	G
rs244967686 MGI SNP Detail Alliance Variant	Chr2:72028034	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 310 bp distal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs33508605 MGI SNP Detail Alliance Variant	Chr2:72028102	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 378 bp distal	SNP	C/T				C	T											C										C
rs234578800 MGI SNP Detail Alliance Variant	Chr2:72028130	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 406 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27968796 MGI SNP Detail Alliance Variant	Chr2:72028181	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 457 bp distal	SNP	A/G		G		G	A	A		A		A			G			G					A					G	A			G					A	A				G														G
rs259683829 MGI SNP Detail Alliance Variant	Chr2:72028219	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 495 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs225492536 MGI SNP Detail Alliance Variant	Chr2:72028240	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 516 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs27968795 MGI SNP Detail Alliance Variant	Chr2:72028303	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 579 bp distal	SNP	A/C		C		C	A	A		A		A			C			C					A					C	A			C					A	A				C														C
rs27968794 MGI SNP Detail Alliance Variant	Chr2:72028332	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 608 bp distal	SNP	C/T		T		T	C	C		C		C			T			T					C					T	C			T					C	C				T		T												T
rs229330007 MGI SNP Detail Alliance Variant	Chr2:72028371	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 647 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs32817747 MGI SNP Detail Alliance Variant	Chr2:72028400	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 676 bp distal	SNP	G/T				G	T											G										G
rs33449394 MGI SNP Detail Alliance Variant	Chr2:72028402	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 678 bp distal	SNP	A/G				A	G											A										A
rs232910277 MGI SNP Detail Alliance Variant	Chr2:72028418	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 694 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs27968793 MGI SNP Detail Alliance Variant	Chr2:72028485	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 761 bp distal	SNP	G/T		T		T	G	G		G		G			T			T					G					T	G			T					G	G				T														T
rs213816119 MGI SNP Detail Alliance Variant	Chr2:72028546	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 822 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27968792 MGI SNP Detail Alliance Variant	Chr2:72028575	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 851 bp distal	SNP	A/T		A			A	A		A		A			A								A					A	A			A					A	A				A		T												A
rs232250622 MGI SNP Detail Alliance Variant	Chr2:72028663	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 939 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27968791 MGI SNP Detail Alliance Variant	Chr2:72028813	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1089 bp distal	SNP	A/G		A			G	G		G		G			A			A					G					A	G			A					G	G				A														A
rs583756817 MGI SNP Detail Alliance Variant	Chr2:72029059	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1335 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs219923083 MGI SNP Detail Alliance Variant	Chr2:72029084	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1360 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs48037461 MGI SNP Detail Alliance Variant	Chr2:72029085	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1361 bp distal	SNP	A/C					C																					A
rs48515646 MGI SNP Detail Alliance Variant	Chr2:72029089	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1365 bp distal	SNP	C/G				G	C																					G
rs226352575 MGI SNP Detail Alliance Variant	Chr2:72029302	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1578 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs240202039 MGI SNP Detail Alliance Variant	Chr2:72029313	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1589 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs27968790 MGI SNP Detail Alliance Variant	Chr2:72029394	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1670 bp distal	SNP	G/T		T			T	T		T		T			T								G					T	T			T					T	T				T														T
rs225554949 MGI SNP Detail Alliance Variant	Chr2:72029417	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1693 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs239458208 MGI SNP Detail Alliance Variant	Chr2:72029587	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1863 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs261691945 MGI SNP Detail Alliance Variant	Chr2:72029686	Gm75163 within coordinates of Rapgef4 Intron Rapgef4 Noncoding-Transcript-Variant Rr558928 1962 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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