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Mouse SNP Summary
Symbol
Name
ID
Rr558962
regulatory region 558962
MGI:8021094

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582997321
MGI SNP Detail
Alliance Variant
Chr2:72194884 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1990 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260235676
MGI SNP Detail
Alliance Variant
Chr2:72194915 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1959 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G A G G G A G G G G G G G A G G G G
rs27985929
MGI SNP Detail
Alliance Variant
Chr2:72194940 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1934 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs27985928
MGI SNP Detail
Alliance Variant
Chr2:72194941 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1933 bp proximal
SNP A/C A A A A A A A A A A C A A A A A C
rs219513716
MGI SNP Detail
Alliance Variant
Chr2:72195051 Map3k20 Coding-Synonymous
Map3k20 Noncoding-Transcript-Variant
Rr558962 1823 bp proximal
SNP C/T T C
rs27985927
MGI SNP Detail
Alliance Variant
Chr2:72195060 Map3k20 Coding-Synonymous
Map3k20 Noncoding-Transcript-Variant
Rr558962 1814 bp proximal
SNP C/T T T T T T T C T T T C C T T C T C
rs27985926
MGI SNP Detail
Alliance Variant
Chr2:72195124 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1750 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs257291556
MGI SNP Detail
Alliance Variant
Chr2:72195143 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1731 bp proximal
SNP A/G A G
rs242194458
MGI SNP Detail
Alliance Variant
Chr2:72195185 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1689 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232486364
MGI SNP Detail
Alliance Variant
Chr2:72195201 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1673 bp proximal
SNP A/T A T
rs217388599
MGI SNP Detail
Alliance Variant
Chr2:72195237 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1637 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27985925
MGI SNP Detail
Alliance Variant
Chr2:72195241 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1633 bp proximal
SNP C/T C C C C C C C C C C T C C C C C T
rs253461923
MGI SNP Detail
Alliance Variant
Chr2:72195277 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1597 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27985924
MGI SNP Detail
Alliance Variant
Chr2:72195435 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1439 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs243795732
MGI SNP Detail
Alliance Variant
Chr2:72195482 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1392 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260713304
MGI SNP Detail
Alliance Variant
Chr2:72195484 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1390 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27985923
MGI SNP Detail
Alliance Variant
Chr2:72195488 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1386 bp proximal
SNP A/C A A A A A A A A C A A C A
rs240509086
MGI SNP Detail
Alliance Variant
Chr2:72195597 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1277 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259564553
MGI SNP Detail
Alliance Variant
Chr2:72195616 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1258 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27985922
MGI SNP Detail
Alliance Variant
Chr2:72195644 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1230 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs581487697
MGI SNP Detail
Alliance Variant
Chr2:72195703 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1171 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264617021
MGI SNP Detail
Alliance Variant
Chr2:72195709 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1165 bp proximal
SNP A/C C A
rs228555083
MGI SNP Detail
Alliance Variant
Chr2:72195711 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1163 bp proximal
SNP C/G G C
rs27985921
MGI SNP Detail
Alliance Variant
Chr2:72195748 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1126 bp proximal
SNP C/G C C C C C C G C C C G C C C C C G
rs249224055
MGI SNP Detail
Alliance Variant
Chr2:72195752 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1122 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27985920
MGI SNP Detail
Alliance Variant
Chr2:72195775 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1099 bp proximal
SNP A/T T T T T T T A T T T A T T T T T A
rs233325128
MGI SNP Detail
Alliance Variant
Chr2:72195787 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1087 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248860936
MGI SNP Detail
Alliance Variant
Chr2:72195799 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1075 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27985919
MGI SNP Detail
Alliance Variant
Chr2:72195925 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 949 bp proximal
SNP A/C C C C C C C C C C C A C C C C C A
rs233850391
MGI SNP Detail
Alliance Variant
Chr2:72195996 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 878 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27985918
MGI SNP Detail
Alliance Variant
Chr2:72196014 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 860 bp proximal
SNP A/G G G G G G G G G G G A G G G G G A
rs27985917
MGI SNP Detail
Alliance Variant
Chr2:72196028 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 846 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs27985916
MGI SNP Detail
Alliance Variant
Chr2:72196046 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 828 bp proximal
SNP A/G A A A A A A G A A A G G A A G G
rs239182704
MGI SNP Detail
Alliance Variant
Chr2:72196055 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 819 bp proximal
SNP A/G A G
rs238910844
MGI SNP Detail
Alliance Variant
Chr2:72196135 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 739 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27985915
MGI SNP Detail
Alliance Variant
Chr2:72196144 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 730 bp proximal
SNP C/T T T T T T T C T T T C T T T T T C
rs220770615
MGI SNP Detail
Alliance Variant
Chr2:72196215 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 659 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240650332
MGI SNP Detail
Alliance Variant
Chr2:72196236 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 638 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252925696
MGI SNP Detail
Alliance Variant
Chr2:72196281 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 593 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583555457
MGI SNP Detail
Alliance Variant
Chr2:72196297 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 577 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586837490
MGI SNP Detail
Alliance Variant
Chr2:72196326 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 548 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27985914
MGI SNP Detail
Alliance Variant
Chr2:72196349 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 525 bp proximal
SNP C/T C C C C C C C C C C T C C C C C T
rs240363896
MGI SNP Detail
Alliance Variant
Chr2:72196353 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 521 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230739265
MGI SNP Detail
Alliance Variant
Chr2:72196355 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 519 bp proximal
SNP C/T T C
rs27985913
MGI SNP Detail
Alliance Variant
Chr2:72196387 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 487 bp proximal
SNP A/C A A A A A A A A A A C A A A A A C
rs219974516
MGI SNP Detail
Alliance Variant
Chr2:72196568 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 306 bp proximal
SNP C/G G C
rs244365233
MGI SNP Detail
Alliance Variant
Chr2:72196585 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 289 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G G A A G A A A G A A A A A A A A A A A A
rs27985912
MGI SNP Detail
Alliance Variant
Chr2:72196626 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 248 bp proximal
SNP A/G A A A A A A G A A A G A A A A A G
rs27985911
MGI SNP Detail
Alliance Variant
Chr2:72196656 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 218 bp proximal
SNP A/T T T T T T T A T T T A T T T T T A
rs248993518
MGI SNP Detail
Alliance Variant
Chr2:72196660 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558961 within coordinates of
Rr558962 214 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27985910
MGI SNP Detail
Alliance Variant
Chr2:72196758 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 116 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs27985909
MGI SNP Detail
Alliance Variant
Chr2:72196843 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 31 bp proximal
SNP A/G A A A A A A G A A A G A A A A A G
rs27985908
MGI SNP Detail
Alliance Variant
Chr2:72196966 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/G G G G G G G G G G G G G G A G
rs214168874
MGI SNP Detail
Alliance Variant
Chr2:72196981 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236999866
MGI SNP Detail
Alliance Variant
Chr2:72197008 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252349658
MGI SNP Detail
Alliance Variant
Chr2:72197065 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212721128
MGI SNP Detail
Alliance Variant
Chr2:72197083 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247534428
MGI SNP Detail
Alliance Variant
Chr2:72197128 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP G/T T G
rs266170563
MGI SNP Detail
Alliance Variant
Chr2:72197130 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/G G A
rs27985907
MGI SNP Detail
Alliance Variant
Chr2:72197172 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/G A A A A A A G A A A G G A A G A G
rs238471587
MGI SNP Detail
Alliance Variant
Chr2:72197174 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP G/T T G
rs256814993
MGI SNP Detail
Alliance Variant
Chr2:72197184 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27985906
MGI SNP Detail
Alliance Variant
Chr2:72197234 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 15 bp distal
SNP A/G G G G G G G A G G G G G A G
rs579799552
MGI SNP Detail
Alliance Variant
Chr2:72197259 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 40 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27985905
MGI SNP Detail
Alliance Variant
Chr2:72197270 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 51 bp distal
SNP A/C A A A A A A C A A A C A A C A
rs27985904
MGI SNP Detail
Alliance Variant
Chr2:72197367 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 148 bp distal
SNP A/G G G G G G G A G G G A G G A G
rs257793934
MGI SNP Detail
Alliance Variant
Chr2:72197422 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 203 bp distal
SNP C/T C T
rs27985903
MGI SNP Detail
Alliance Variant
Chr2:72197429 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 210 bp distal
SNP C/T C C C C C T C C T C C T
rs226847125
MGI SNP Detail
Alliance Variant
Chr2:72197430 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 211 bp distal
SNP C/T C T
rs228221090
MGI SNP Detail
Alliance Variant
Chr2:72197481 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 262 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27985902
MGI SNP Detail
Alliance Variant
Chr2:72197539 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 320 bp distal
SNP G/T T T T T T T T T T T G T T T T T G
rs27985901
MGI SNP Detail
Alliance Variant
Chr2:72197652 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 433 bp distal
SNP C/T T T T T T T C T T T C C T T C T C
rs27985900
MGI SNP Detail
Alliance Variant
Chr2:72197686 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 467 bp distal
SNP C/T T T T T T T C T T T C C T T C T C
rs27985899
MGI SNP Detail
Alliance Variant
Chr2:72197729 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 510 bp distal
SNP A/G A A A A A A A A A A G A A A A A G
rs27985898
MGI SNP Detail
Alliance Variant
Chr2:72197788 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 569 bp distal
SNP C/T T T T T T T C T T T C C T T C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27985897
MGI SNP Detail
Alliance Variant
Chr2:72197857 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 638 bp distal
SNP A/G A A A A A A G A A A G A A G A
rs247351492
MGI SNP Detail
Alliance Variant
Chr2:72197872 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 653 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214975344
MGI SNP Detail
Alliance Variant
Chr2:72197873 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 654 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G A G G G A G G G G G G G G G G G G
rs230681178
MGI SNP Detail
Alliance Variant
Chr2:72198067 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 848 bp distal
SNP C/T T C
rs27985896
MGI SNP Detail
Alliance Variant
Chr2:72198076 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 857 bp distal
SNP A/G A A A A A A G A A A G G A A G A G
rs214243544
MGI SNP Detail
Alliance Variant
Chr2:72198156 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 937 bp distal
SNP A/C C A
rs236653402
MGI SNP Detail
Alliance Variant
Chr2:72198197 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 978 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256678253
MGI SNP Detail
Alliance Variant
Chr2:72198317 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1098 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27985895
MGI SNP Detail
Alliance Variant
Chr2:72198348 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1129 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs243019839
MGI SNP Detail
Alliance Variant
Chr2:72198383 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1164 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27985894
MGI SNP Detail
Alliance Variant
Chr2:72198394 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1175 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs27985893
MGI SNP Detail
Alliance Variant
Chr2:72198438 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1219 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs27985892
MGI SNP Detail
Alliance Variant
Chr2:72198503 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1284 bp distal
SNP A/G G G G G G G G G G G A G G G G G A
rs27985891
MGI SNP Detail
Alliance Variant
Chr2:72198540 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1321 bp distal
SNP C/T C C C C C C T C C C T C C T C
rs27985890
MGI SNP Detail
Alliance Variant
Chr2:72198579 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1360 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs243926146
MGI SNP Detail
Alliance Variant
Chr2:72198607 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1388 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T T A A T A A A T A A A A A A A A A A A A
rs254595227
MGI SNP Detail
Alliance Variant
Chr2:72198638 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1419 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27985889
MGI SNP Detail
Alliance Variant
Chr2:72198712 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1493 bp distal
SNP A/T T T T T T T T T T T A T T A T
rs247296276
MGI SNP Detail
Alliance Variant
Chr2:72198773 Map3k20 Coding-Synonymous
Map3k20 Noncoding-Transcript-Variant
Rr558962 1554 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T G G T T G T T T G T T T T T T T G T T T T
rs215103054
MGI SNP Detail
Alliance Variant
Chr2:72198776 Map3k20 Coding-Synonymous
Map3k20 Noncoding-Transcript-Variant
Rr558962 1557 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A A C C A C C C A C C C C C C C C C C C C
rs232776692
MGI SNP Detail
Alliance Variant
Chr2:72198847 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1628 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27985888
MGI SNP Detail
Alliance Variant
Chr2:72198852 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1633 bp distal
SNP C/T C C C C C C C C C C T C C C C C T
rs214707298
MGI SNP Detail
Alliance Variant
Chr2:72198853 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1634 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234315654
MGI SNP Detail
Alliance Variant
Chr2:72198857 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1638 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs261321459
MGI SNP Detail
Alliance Variant
Chr2:72198884 Map3k20 Intron
Map3k20 Noncoding-Transcript-Variant
Rr558962 1665 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 100 of 104

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory