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Mouse SNP Summary
Symbol
Name
ID 		Rr559124
regulatory region 559124
MGI:8021256

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223953232
MGI SNP Detail		 Chr2:73108983 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1600 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27950358
MGI SNP Detail		 Chr2:73109084 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1499 bp proximal
 SNP A/G G G G G G G A G G A A G G A
rs27950357
MGI SNP Detail		 Chr2:73109098 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1485 bp proximal
 SNP A/C A A A A A A C A A C C A A C A
rs27950356
MGI SNP Detail		 Chr2:73109116 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1467 bp proximal
 SNP C/T T T T T T T C T T C T T C T
rs235557220
MGI SNP Detail		 Chr2:73109128 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1455 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27950355
MGI SNP Detail		 Chr2:73109243 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1340 bp proximal
 SNP C/T T T T T T T T T T T T T T T C
rs233436820
MGI SNP Detail		 Chr2:73109337 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1246 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6245110
MGI SNP Detail		 Chr2:73109403 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1180 bp proximal
 SNP G/T G G G G G G G T T G G T T G G T
rs6245651
MGI SNP Detail		 Chr2:73109490 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1093 bp proximal
 SNP A/C C C C C C C C A A C C A A C C A C
rs6258380
MGI SNP Detail		 Chr2:73109532 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 1051 bp proximal
 SNP A/G A A A A A A A G G A A G G A A G A
rs245154725
MGI SNP Detail		 Chr2:73109606 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 977 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214528274
MGI SNP Detail		 Chr2:73109618 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 965 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229952579
MGI SNP Detail		 Chr2:73109619 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 964 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6258996
MGI SNP Detail		 Chr2:73109704 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 879 bp proximal
 SNP A/G G A
rs6259414
MGI SNP Detail		 Chr2:73109733 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 850 bp proximal
 SNP C/T C T
rs239451484
MGI SNP Detail		 Chr2:73109740 Cpgi11770 within coordinates of
Rr559122 within coordinates of
Rr559124 843 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264163349
MGI SNP Detail		 Chr2:73109916 Rr559122 within coordinates of
Rr559124 667 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27950354
MGI SNP Detail		 Chr2:73110119 Rr559122 within coordinates of
Rr559124 464 bp proximal
 SNP C/T C C C C C C T C C T T C C T C
rs233409780
MGI SNP Detail		 Chr2:73110672 Rr559124 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27950353
MGI SNP Detail		 Chr2:73110724 Rr559124 within coordinates of
 SNP A/G A A A A A A G A A G A A G
rs249480838
MGI SNP Detail		 Chr2:73110990 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27950352
MGI SNP Detail		 Chr2:73111009 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/G G G G G G G C G G C C G G C
rs235615096
MGI SNP Detail		 Chr2:73111033 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T C T T C T T T C T T T T T T T C T T C T
rs261764105
MGI SNP Detail		 Chr2:73111038 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226688169
MGI SNP Detail		 Chr2:73111061 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248726057
MGI SNP Detail		 Chr2:73111367 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27950351
MGI SNP Detail		 Chr2:73111374 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T C C C C C C T C C T T C C T C
rs232644380
MGI SNP Detail		 Chr2:73111377 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245215976
MGI SNP Detail		 Chr2:73111479 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258526277
MGI SNP Detail		 Chr2:73111480 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs27950350
MGI SNP Detail		 Chr2:73111519 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T T T T T T T C T T C C T T C T
rs27950349
MGI SNP Detail		 Chr2:73111567 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP C/T C C C C C C T C C T T C C T C
rs27950348
MGI SNP Detail		 Chr2:73111586 Cpgi11771 within coordinates of
Rr559124 within coordinates of
 SNP A/C C C C C C C A C C A A C C A C
rs242113763
MGI SNP Detail		 Chr2:73111602 Rr559124 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254682491
MGI SNP Detail		 Chr2:73111609 Rr559124 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216092697
MGI SNP Detail		 Chr2:73111762 Rr559124 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233464446
MGI SNP Detail		 Chr2:73111965 Rr559124 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27950347
MGI SNP Detail		 Chr2:73111971 Rr559124 within coordinates of
 SNP C/T C C C C C C T C C T T C C T C
rs27950346
MGI SNP Detail		 Chr2:73112120 Rr559124 within coordinates of
 SNP A/T A A A A A A T A A T T A A T A
rs229727075
MGI SNP Detail		 Chr2:73112174 Rr559124 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261304593
MGI SNP Detail		 Chr2:73112175 Rr559124 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27950345
MGI SNP Detail		 Chr2:73112407 Rr559124 51 bp distal
 SNP A/G A A A A A A A A A A A A A G A
rs220515230
MGI SNP Detail		 Chr2:73112476 Rr559124 120 bp distal
 SNP C/T C T
rs250722598
MGI SNP Detail		 Chr2:73112522 Rr559124 166 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263360354
MGI SNP Detail		 Chr2:73112525 Rr559124 169 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27950344
MGI SNP Detail		 Chr2:73112530 Rr559124 174 bp distal
 SNP A/T A A A A A A T A A T T T A A T A A
rs581185001
MGI SNP Detail		 Chr2:73112560 Rr559124 204 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239196727
MGI SNP Detail		 Chr2:73112597 Rr559124 241 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258584292
MGI SNP Detail		 Chr2:73112611 Rr559124 255 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs6312536
MGI SNP Detail		 Chr2:73112632 Rr559124 276 bp distal
 SNP A/T A A A A A T T A T T A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250069880
MGI SNP Detail		 Chr2:73112659 Rr559124 303 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27950343
MGI SNP Detail		 Chr2:73112675 Rr559124 319 bp distal
 SNP C/T C C C C C C C C C T T C C C C
rs265955951
MGI SNP Detail		 Chr2:73112701 Rr559124 345 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233947051
MGI SNP Detail		 Chr2:73113090 Rr559124 734 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257284191
MGI SNP Detail		 Chr2:73113252 Rr559124 896 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215724128
MGI SNP Detail		 Chr2:73113270 Rr559124 914 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27950342
MGI SNP Detail		 Chr2:73113362 Rr559124 1006 bp distal
 SNP A/G G G G G G G A G G A A G G A G
rs243738875
MGI SNP Detail		 Chr2:73113376 Rr559124 1020 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214256713
MGI SNP Detail		 Chr2:73113377 Rr559124 1021 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583695941
MGI SNP Detail
Alliance Variant		 Chr2:73113462 Cir1 mRNA-UTR
Rr559124 1106 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T C C T T C T T T C T T T T T T T T T T T
rs229802506
MGI SNP Detail
Alliance Variant		 Chr2:73113463 Cir1 mRNA-UTR
Rr559124 1107 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T T A A A T T A A T A A A T A A A A A A T A A A A
rs586838476
MGI SNP Detail
Alliance Variant		 Chr2:73113503 Cir1 mRNA-UTR
Rr559124 1147 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580828428
MGI SNP Detail
Alliance Variant		 Chr2:73113505 Cir1 mRNA-UTR
Rr559124 1149 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256040504
MGI SNP Detail
Alliance Variant		 Chr2:73113549 Cir1 mRNA-UTR
Rr559124 1193 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs217774270
MGI SNP Detail
Alliance Variant		 Chr2:73113550 Cir1 mRNA-UTR
Rr559124 1194 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs585145796
MGI SNP Detail
Alliance Variant		 Chr2:73113606 Cir1 mRNA-UTR
Rr559124 1250 bp distal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579333292
MGI SNP Detail
Alliance Variant		 Chr2:73113631 Cir1 mRNA-UTR
Rr559124 1275 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A C C A A C A A A C A A A A A A A A A A A A
rs581101531
MGI SNP Detail
Alliance Variant		 Chr2:73113647 Cir1 mRNA-UTR
Rr559124 1291 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 68 of 68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory