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Mouse SNP Summary
Symbol
Name
ID 		Rr559377
regulatory region 559377
MGI:8021509

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227062655
MGI SNP Detail
Alliance Variant		 Chr2:74548382 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1967 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T T
rs247192916
MGI SNP Detail
Alliance Variant		 Chr2:74548491 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1858 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C T C C C T C C C C C C C C C C C C
rs257497618
MGI SNP Detail
Alliance Variant		 Chr2:74548568 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1781 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C T C C C T C C C C C C C C C C C C
rs226582448
MGI SNP Detail
Alliance Variant		 Chr2:74548668 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1681 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580414574
MGI SNP Detail
Alliance Variant		 Chr2:74548724 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1625 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583662416
MGI SNP Detail
Alliance Variant		 Chr2:74548827 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1522 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A G A A A A A G A A A A A A A A A A A A
rs27967849
MGI SNP Detail
Alliance Variant		 Chr2:74548846 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1503 bp proximal
 SNP C/T C C C C C C C C C T C C T C
rs213115434
MGI SNP Detail
Alliance Variant		 Chr2:74548899 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1450 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235554079
MGI SNP Detail
Alliance Variant		 Chr2:74548911 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1438 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27967848
MGI SNP Detail
Alliance Variant		 Chr2:74548993 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1356 bp proximal
 SNP C/T T T T T T T T T C T T C
rs221858407
MGI SNP Detail
Alliance Variant		 Chr2:74549013 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1336 bp proximal
 SNP A/G G A
rs27967847
MGI SNP Detail
Alliance Variant		 Chr2:74549101 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1248 bp proximal
 SNP C/T C C C C C C C C C T C C T C
rs586225642
MGI SNP Detail
Alliance Variant		 Chr2:74549115 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1234 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232908840
MGI SNP Detail
Alliance Variant		 Chr2:74549166 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1183 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252034772
MGI SNP Detail
Alliance Variant		 Chr2:74549260 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1089 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219688284
MGI SNP Detail
Alliance Variant		 Chr2:74549320 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1029 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232506625
MGI SNP Detail
Alliance Variant		 Chr2:74549338 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 1011 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255716212
MGI SNP Detail
Alliance Variant		 Chr2:74549405 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 944 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C T C C C T C C C C C C C C C C C C
rs221419692
MGI SNP Detail
Alliance Variant		 Chr2:74549425 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 924 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247077896
MGI SNP Detail
Alliance Variant		 Chr2:74549442 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 907 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266081944
MGI SNP Detail
Alliance Variant		 Chr2:74549443 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 906 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220848062
MGI SNP Detail
Alliance Variant		 Chr2:74549499 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 850 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240986201
MGI SNP Detail
Alliance Variant		 Chr2:74549516 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 833 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257268265
MGI SNP Detail
Alliance Variant		 Chr2:74549539 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 810 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226498132
MGI SNP Detail
Alliance Variant		 Chr2:74549611 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 738 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243982372
MGI SNP Detail
Alliance Variant		 Chr2:74549641 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 708 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261866799
MGI SNP Detail
Alliance Variant		 Chr2:74549668 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 681 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579817061
MGI SNP Detail
Alliance Variant		 Chr2:74549706 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 643 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583556421
MGI SNP Detail
Alliance Variant		 Chr2:74549795 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 554 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586226383
MGI SNP Detail
Alliance Variant		 Chr2:74549822 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 527 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233942236
MGI SNP Detail
Alliance Variant		 Chr2:74550016 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 333 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A C A A A C A A A A A A A C A A A A
rs254629395
MGI SNP Detail
Alliance Variant		 Chr2:74550031 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 318 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C T C C C C C C C C C C C C
rs217425726
MGI SNP Detail
Alliance Variant		 Chr2:74550045 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 304 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G A G G G A G G G G G G G G G G G G
rs4223222
MGI SNP Detail
Alliance Variant		 Chr2:74550106 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 243 bp proximal
 SNP A/G G G G G G G G A
rs4223223
MGI SNP Detail
Alliance Variant		 Chr2:74550154 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 195 bp proximal
 SNP G/T G G G G G G G T
rs4223224
MGI SNP Detail
Alliance Variant		 Chr2:74550155 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 194 bp proximal
 SNP A/G G G G G G G G A
rs4223225
MGI SNP Detail
Alliance Variant		 Chr2:74550160 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 189 bp proximal
 SNP A/G G G G G G G G A
rs4223226
MGI SNP Detail
Alliance Variant		 Chr2:74550225 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 124 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C T T T T
rs4223227
MGI SNP Detail
Alliance Variant		 Chr2:74550247 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 102 bp proximal
 SNP A/G G G G G G G G A
rs4223228
MGI SNP Detail
Alliance Variant		 Chr2:74550304 Hoxd3 Intron
Igs15 within coordinates of
Rr559377 45 bp proximal
 SNP C/T T T T T T T T T C T T T C T T C T T
rs4223229
MGI SNP Detail
Alliance Variant		 Chr2:74550406 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 within coordinates of
 SNP A/T T T T T T T T A
rs4223230
MGI SNP Detail
Alliance Variant		 Chr2:74550427 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 within coordinates of
 SNP C/G C C C C C C C G
rs27967846
MGI SNP Detail
Alliance Variant		 Chr2:74550442 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 within coordinates of
 SNP C/G G G G G G G G G G C G G C G
rs220809103
MGI SNP Detail
Alliance Variant		 Chr2:74550539 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 32 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241085841
MGI SNP Detail
Alliance Variant		 Chr2:74550540 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 33 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250877154
MGI SNP Detail
Alliance Variant		 Chr2:74550596 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 89 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219993770
MGI SNP Detail
Alliance Variant		 Chr2:74550610 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 103 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241096273
MGI SNP Detail
Alliance Variant		 Chr2:74550667 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 160 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264851722
MGI SNP Detail
Alliance Variant		 Chr2:74550686 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 179 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C G C C C G C C C C C C C G C C C C
rs233122765
MGI SNP Detail
Alliance Variant		 Chr2:74550691 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 184 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251093435
MGI SNP Detail
Alliance Variant		 Chr2:74550697 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 190 bp distal
 SNP C/T C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257126120
MGI SNP Detail
Alliance Variant		 Chr2:74550720 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 213 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226948880
MGI SNP Detail
Alliance Variant		 Chr2:74550760 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 253 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246141312
MGI SNP Detail
Alliance Variant		 Chr2:74550819 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 312 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580847491
MGI SNP Detail
Alliance Variant		 Chr2:74550863 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 356 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213691030
MGI SNP Detail
Alliance Variant		 Chr2:74550878 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 371 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231280447
MGI SNP Detail
Alliance Variant		 Chr2:74550945 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 438 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249199752
MGI SNP Detail
Alliance Variant		 Chr2:74551033 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 526 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582916454
MGI SNP Detail
Alliance Variant		 Chr2:74551066 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 559 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs587375579
MGI SNP Detail
Alliance Variant		 Chr2:74551185 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 678 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213678484
MGI SNP Detail
Alliance Variant		 Chr2:74551215 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 708 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A C A A A C A A A A A A A C A A A A
rs239918381
MGI SNP Detail
Alliance Variant		 Chr2:74551243 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 736 bp distal
Rr559378 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27967845
MGI SNP Detail
Alliance Variant		 Chr2:74551412 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 905 bp distal
Rr559378 within coordinates of
 SNP C/G G G G G G G G G G C G G C G
rs215449662
MGI SNP Detail
Alliance Variant		 Chr2:74551439 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 932 bp distal
Rr559378 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234526248
MGI SNP Detail
Alliance Variant		 Chr2:74551498 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 991 bp distal
Rr559378 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251031144
MGI SNP Detail
Alliance Variant		 Chr2:74551603 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1096 bp distal
Rr559378 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220105025
MGI SNP Detail
Alliance Variant		 Chr2:74551615 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1108 bp distal
Rr559378 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243591734
MGI SNP Detail
Alliance Variant		 Chr2:74551649 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1142 bp distal
Rr559378 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C T C C C T C C C C C C C T C C C C
rs256000243
MGI SNP Detail
Alliance Variant		 Chr2:74551661 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1154 bp distal
Rr559378 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226152441
MGI SNP Detail
Alliance Variant		 Chr2:74551800 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1293 bp distal
Rr559378 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581749824
MGI SNP Detail
Alliance Variant		 Chr2:74551912 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1405 bp distal
Rr559378 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248317699
MGI SNP Detail
Alliance Variant		 Chr2:74551951 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1444 bp distal
Rr559378 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257032092
MGI SNP Detail
Alliance Variant		 Chr2:74552235 Hoxd3 Intron
Hoxd4 Intron
Hoxd4 Noncoding-Transcript-Variant
Igs15 within coordinates of
Rr559377 1728 bp distal
Rr559379 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory