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Mouse SNP Summary
Symbol
Name
ID 		Rr559466
regulatory region 559466
MGI:8021598

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239575649
MGI SNP Detail		 Chr2:75146783 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1950 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260230199
MGI SNP Detail		 Chr2:75146880 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1853 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50908010
MGI SNP Detail		 Chr2:75146909 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1824 bp proximal
 SNP T T T T T T
rs241523732
MGI SNP Detail		 Chr2:75147085 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1648 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251548146
MGI SNP Detail		 Chr2:75147096 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1637 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27964550
MGI SNP Detail		 Chr2:75147154 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1579 bp proximal
 SNP A/G G G G G G G G G G G A G G A G
rs230123713
MGI SNP Detail		 Chr2:75147156 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1577 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250245548
MGI SNP Detail		 Chr2:75147157 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1576 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27964549
MGI SNP Detail		 Chr2:75147231 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1502 bp proximal
 SNP A/G A A A A A A A A A A A G A
rs248046108
MGI SNP Detail		 Chr2:75147244 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1489 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262701924
MGI SNP Detail		 Chr2:75147248 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1485 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs27964548
MGI SNP Detail		 Chr2:75147268 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1465 bp proximal
 SNP A/G A A A A A A A A A A A A G A G G A
rs245964337
MGI SNP Detail		 Chr2:75147463 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1270 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G A G G G A G G G G G G G G G G G G
rs238659453
MGI SNP Detail		 Chr2:75147470 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1263 bp proximal
 SNP A/G G A
rs223427516
MGI SNP Detail		 Chr2:75147564 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1169 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236521384
MGI SNP Detail		 Chr2:75147660 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1073 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T T
rs27964547
MGI SNP Detail		 Chr2:75147726 2600014E21Rik within coordinates of
Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1007 bp proximal
 SNP C/T C C C C C C C C C C C T C C T C
rs586214760
MGI SNP Detail		 Chr2:75148241 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 492 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G A G G G A G G G G G G G G G G G G
rs27964546
MGI SNP Detail		 Chr2:75148362 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 371 bp proximal
 SNP C/T C C C C C C C C C C C T C
rs27964545
MGI SNP Detail		 Chr2:75148489 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 244 bp proximal
 SNP A/G G G G G G G A G G G G G A G
rs216299306
MGI SNP Detail		 Chr2:75148501 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 232 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232431609
MGI SNP Detail		 Chr2:75148543 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 190 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245389395
MGI SNP Detail		 Chr2:75148621 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 112 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214753811
MGI SNP Detail		 Chr2:75148684 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 49 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T G T T T G T T T T T T T G T T T T
rs230136583
MGI SNP Detail		 Chr2:75148694 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 39 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250671565
MGI SNP Detail		 Chr2:75148782 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 28 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27964544
MGI SNP Detail		 Chr2:75148868 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 114 bp distal
 SNP C/G C C C C C C G C C C G C C G C
rs27964543
MGI SNP Detail		 Chr2:75148941 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 187 bp distal
 SNP A/G A A A A A A G A A A G A A G A
rs580187504
MGI SNP Detail		 Chr2:75149001 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 247 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27964542
MGI SNP Detail		 Chr2:75149137 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 383 bp distal
 SNP C/T C C C C C C T C C C T C C T C
rs582369718
MGI SNP Detail		 Chr2:75149294 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 540 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A
rs585700404
MGI SNP Detail		 Chr2:75149296 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 542 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33543808
MGI SNP Detail		 Chr2:75149297 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 543 bp distal
 SNP A/T T T A
rs224840951
MGI SNP Detail		 Chr2:75149408 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 654 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs27964541
MGI SNP Detail		 Chr2:75149425 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 671 bp distal
 SNP A/C A A A A A A C A A A C A A C A
rs250466521
MGI SNP Detail		 Chr2:75149495 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 741 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50101562
MGI SNP Detail		 Chr2:75149522 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 768 bp distal
 SNP C/T C T T C
rs224819488
MGI SNP Detail		 Chr2:75149539 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 785 bp distal
 SNP C/T T C
rs265881862
MGI SNP Detail		 Chr2:75149558 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 804 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A G A A A G A A A A A A A A A A A A
rs250599431
MGI SNP Detail		 Chr2:75149685 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 931 bp distal
 SNP A/G A G
rs251657992
MGI SNP Detail		 Chr2:75149695 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 941 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C T C C C T C C C C C C C C C C C C
rs27964540
MGI SNP Detail		 Chr2:75149794 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1040 bp distal
 SNP C/T C C C C C C T C C C T C C T C
rs27964539
MGI SNP Detail		 Chr2:75149818 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1064 bp distal
 SNP A/G G G G G G G A G G G A G G A G
rs245028960
MGI SNP Detail		 Chr2:75149863 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1109 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G T G G G T G G G G G G G G G G G G
rs27964538
MGI SNP Detail		 Chr2:75149929 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1175 bp distal
 SNP C/T C C C C C C T C C C T C C T C
rs224548945
MGI SNP Detail		 Chr2:75149958 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1204 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244554366
MGI SNP Detail		 Chr2:75149976 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1222 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218491070
MGI SNP Detail		 Chr2:75150021 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1267 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C T C C C T C C C C C C C C C C C C
rs27964537
MGI SNP Detail		 Chr2:75150217 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1463 bp distal
 SNP A/G G G G G G G A G G G A G G A G
rs257019413
MGI SNP Detail		 Chr2:75150235 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1481 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A G A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214368926
MGI SNP Detail		 Chr2:75150266 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1512 bp distal
 SNP C/T T C
rs231130569
MGI SNP Detail		 Chr2:75150307 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1553 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27964536
MGI SNP Detail		 Chr2:75150404 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1650 bp distal
 SNP C/G C C C C C C C C C C C C G C C G C
rs217957030
MGI SNP Detail		 Chr2:75150454 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1700 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230729903
MGI SNP Detail		 Chr2:75150456 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1702 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260216231
MGI SNP Detail		 Chr2:75150516 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1762 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27964535
MGI SNP Detail		 Chr2:75150520 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1766 bp distal
 SNP C/T C C C C C C T C C C T C C C C
rs245051051
MGI SNP Detail		 Chr2:75150530 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1776 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265552782
MGI SNP Detail		 Chr2:75150539 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1785 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222004869
MGI SNP Detail		 Chr2:75150581 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1827 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T T
rs238995756
MGI SNP Detail		 Chr2:75150628 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1874 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A C A A A C A A A A A A A A A A A A
rs258374473
MGI SNP Detail		 Chr2:75150631 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1877 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224276056
MGI SNP Detail		 Chr2:75150668 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1914 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244643994
MGI SNP Detail		 Chr2:75150680 Gm39857 within coordinates of
Igs15 within coordinates of
Rr559466 1926 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T C T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 64 of 64
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory