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Mouse SNP Summary
Symbol
Name
ID
Rr560608
regulatory region 560608
MGI:8022740

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212338440
MGI SNP Detail
Alliance Variant
Chr2:90793998 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1939 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237461841
MGI SNP Detail
Alliance Variant
Chr2:90794007 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1930 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251100356
MGI SNP Detail
Alliance Variant
Chr2:90794596 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1341 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs580613268
MGI SNP Detail
Alliance Variant
Chr2:90794632 Celf1 Intron
Celf1 mRNA-UTR
Celf1 Noncoding-Transcript-Variant
Rr560608 1305 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215675660
MGI SNP Detail
Alliance Variant
Chr2:90795121 Celf1 Intron
Celf1 mRNA-UTR
Celf1 Noncoding-Transcript-Variant
Rr560608 816 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs27428312
MGI SNP Detail
Alliance Variant
Chr2:90795398 Celf1 Intron
Celf1 mRNA-UTR
Celf1 Noncoding-Transcript-Variant
Rr560607 within coordinates of
Rr560608 539 bp proximal
SNP A/G A A A A A A A A A A G A G A
rs253688275
MGI SNP Detail
Alliance Variant
Chr2:90795668 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 269 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27428311
MGI SNP Detail
Alliance Variant
Chr2:90795732 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 205 bp proximal
SNP C/T C C C C C C C C C C T C T C
rs236607533
MGI SNP Detail
Alliance Variant
Chr2:90795769 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 168 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27428310
MGI SNP Detail
Alliance Variant
Chr2:90795774 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 163 bp proximal
SNP G/T G G G G G G G G G G T G T G
rs220256968
MGI SNP Detail
Alliance Variant
Chr2:90795895 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 42 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs244907332
MGI SNP Detail
Alliance Variant
Chr2:90795900 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 37 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262288671
MGI SNP Detail
Alliance Variant
Chr2:90796098 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27428309
MGI SNP Detail
Alliance Variant
Chr2:90796125 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 within coordinates of
SNP G/T T T T T T T T T T T G T G T
rs239155503
MGI SNP Detail
Alliance Variant
Chr2:90796126 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257798085
MGI SNP Detail
Alliance Variant
Chr2:90796316 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27428308
MGI SNP Detail
Alliance Variant
Chr2:90796355 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 11 bp distal
SNP A/G A A A A A A G A A A A A A A
rs247255222
MGI SNP Detail
Alliance Variant
Chr2:90796413 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 69 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264534739
MGI SNP Detail
Alliance Variant
Chr2:90796414 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 70 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228411357
MGI SNP Detail
Alliance Variant
Chr2:90796428 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 84 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27428307
MGI SNP Detail
Alliance Variant
Chr2:90796532 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 188 bp distal
SNP A/T A A A A A A T A A A T A T A
rs215030931
MGI SNP Detail
Alliance Variant
Chr2:90796551 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 207 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234370976
MGI SNP Detail
Alliance Variant
Chr2:90796639 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 295 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247613201
MGI SNP Detail
Alliance Variant
Chr2:90796729 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 385 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs216780624
MGI SNP Detail
Alliance Variant
Chr2:90796816 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 472 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236436027
MGI SNP Detail
Alliance Variant
Chr2:90796835 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 491 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs255535183
MGI SNP Detail
Alliance Variant
Chr2:90796851 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 507 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221309473
MGI SNP Detail
Alliance Variant
Chr2:90796866 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 522 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236331672
MGI SNP Detail
Alliance Variant
Chr2:90797183 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 839 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261944906
MGI SNP Detail
Alliance Variant
Chr2:90797308 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 964 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27428306
MGI SNP Detail
Alliance Variant
Chr2:90797309 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 965 bp distal
SNP A/G A A A A A A G A A A G A G A
rs583009379
MGI SNP Detail
Alliance Variant
Chr2:90797338 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 994 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239246735
MGI SNP Detail
Alliance Variant
Chr2:90797369 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1025 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33129791
MGI SNP Detail
Alliance Variant
Chr2:90797406 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1062 bp distal
SNP C/T C T C T T
rs221768942
MGI SNP Detail
Alliance Variant
Chr2:90797432 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1088 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241271484
MGI SNP Detail
Alliance Variant
Chr2:90797454 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1110 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261227132
MGI SNP Detail
Alliance Variant
Chr2:90797548 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1204 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs228978831
MGI SNP Detail
Alliance Variant
Chr2:90797572 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1228 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242805938
MGI SNP Detail
Alliance Variant
Chr2:90797760 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1416 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265375945
MGI SNP Detail
Alliance Variant
Chr2:90797761 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1417 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs227623452
MGI SNP Detail
Alliance Variant
Chr2:90797830 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1486 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247636952
MGI SNP Detail
Alliance Variant
Chr2:90797873 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1529 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27428305
MGI SNP Detail
Alliance Variant
Chr2:90797973 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1629 bp distal
SNP C/T T T T T T T C T T T C T C T
rs229529181
MGI SNP Detail
Alliance Variant
Chr2:90798087 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1743 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252752112
MGI SNP Detail
Alliance Variant
Chr2:90798138 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1794 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212857903
MGI SNP Detail
Alliance Variant
Chr2:90798274 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1930 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238360316
MGI SNP Detail
Alliance Variant
Chr2:90798336 Celf1 Intron
Celf1 Noncoding-Transcript-Variant
Rr560608 1992 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 47 of 47

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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