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Mouse SNP Summary
Symbol
Name
ID
Rr561039
regulatory region 561039
MGI:8023171

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219986073
MGI SNP Detail
Alliance Variant
Chr2:92811571 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1910 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240284090
MGI SNP Detail
Alliance Variant
Chr2:92811608 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1873 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259715459
MGI SNP Detail
Alliance Variant
Chr2:92811609 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1872 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27382479
MGI SNP Detail
Alliance Variant
Chr2:92811638 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1843 bp proximal
SNP A/T A A T A A A A A A A A A A A A A A
rs27382478
MGI SNP Detail
Alliance Variant
Chr2:92811676 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1805 bp proximal
SNP G/T T T T T T T G T T T T T T T T
rs261414261
MGI SNP Detail
Alliance Variant
Chr2:92811729 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1752 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229147952
MGI SNP Detail
Alliance Variant
Chr2:92811795 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1686 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250696134
MGI SNP Detail
Alliance Variant
Chr2:92811869 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1612 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27382477
MGI SNP Detail
Alliance Variant
Chr2:92811978 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1503 bp proximal
SNP C/G G C G G G G G G G G G G G G G G
rs226181122
MGI SNP Detail
Alliance Variant
Chr2:92812026 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1455 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27382476
MGI SNP Detail
Alliance Variant
Chr2:92812126 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1355 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs27382475
MGI SNP Detail
Alliance Variant
Chr2:92812241 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1240 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs27382474
MGI SNP Detail
Alliance Variant
Chr2:92812314 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1167 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs264345156
MGI SNP Detail
Alliance Variant
Chr2:92812315 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1166 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212315035
MGI SNP Detail
Alliance Variant
Chr2:92812349 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1132 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237516064
MGI SNP Detail
Alliance Variant
Chr2:92812390 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1091 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27382473
MGI SNP Detail
Alliance Variant
Chr2:92812433 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1048 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs219953810
MGI SNP Detail
Alliance Variant
Chr2:92812457 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1024 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233535868
MGI SNP Detail
Alliance Variant
Chr2:92812516 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 965 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs253397257
MGI SNP Detail
Alliance Variant
Chr2:92812518 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 963 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225869259
MGI SNP Detail
Alliance Variant
Chr2:92812545 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 936 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248134488
MGI SNP Detail
Alliance Variant
Chr2:92812560 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 921 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs264591850
MGI SNP Detail
Alliance Variant
Chr2:92812561 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 920 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs225459731
MGI SNP Detail
Alliance Variant
Chr2:92812736 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 745 bp proximal
SNP A/T A T
rs237520951
MGI SNP Detail
Alliance Variant
Chr2:92812781 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 700 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27382472
MGI SNP Detail
Alliance Variant
Chr2:92812848 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 633 bp proximal
SNP C/T T T T T T T T T T C T T C T
rs226145622
MGI SNP Detail
Alliance Variant
Chr2:92812886 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 595 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs6357021
MGI SNP Detail
Alliance Variant
Chr2:92812921 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 560 bp proximal
SNP C/T C T
rs258185750
MGI SNP Detail
Alliance Variant
Chr2:92812977 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 504 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234255051
MGI SNP Detail
Alliance Variant
Chr2:92812994 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 487 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6357125
MGI SNP Detail
Alliance Variant
Chr2:92812996 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 485 bp proximal
SNP A/G A A A A A A A G G A A A G A A G A
rs212571597
MGI SNP Detail
Alliance Variant
Chr2:92813001 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 480 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6357554
MGI SNP Detail
Alliance Variant
Chr2:92813046 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 435 bp proximal
SNP C/T T T T T T T T C C T T T C T T C T
rs245346736
MGI SNP Detail
Alliance Variant
Chr2:92813086 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 395 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214802540
MGI SNP Detail
Alliance Variant
Chr2:92813093 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 388 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234377219
MGI SNP Detail
Alliance Variant
Chr2:92813137 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 344 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253269908
MGI SNP Detail
Alliance Variant
Chr2:92813169 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 312 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6358629
MGI SNP Detail
Alliance Variant
Chr2:92813262 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 219 bp proximal
SNP C/T T T T T T T T C C T T T C T T C T
rs6359095
MGI SNP Detail
Alliance Variant
Chr2:92813332 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 149 bp proximal
SNP A/G A A A A A A A A G A A A G A A G A
rs255309497
MGI SNP Detail
Alliance Variant
Chr2:92813348 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 133 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220909049
MGI SNP Detail
Alliance Variant
Chr2:92813406 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 75 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237468162
MGI SNP Detail
Alliance Variant
Chr2:92813504 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 2 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256179211
MGI SNP Detail
Alliance Variant
Chr2:92813574 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 72 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27382471
MGI SNP Detail
Alliance Variant
Chr2:92813594 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 92 bp distal
SNP C/T C C C C C C C C C C C C C T C
rs583604954
MGI SNP Detail
Alliance Variant
Chr2:92813640 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 138 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240022692
MGI SNP Detail
Alliance Variant
Chr2:92813700 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 198 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs27382470
MGI SNP Detail
Alliance Variant
Chr2:92813725 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 223 bp distal
SNP C/T C C T C C T C C T C C C C C C
rs27382469
MGI SNP Detail
Alliance Variant
Chr2:92813918 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 416 bp distal
SNP A/T A A A A A A A A A T A A T A
rs260360612
MGI SNP Detail
Alliance Variant
Chr2:92813936 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 434 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs585826515
MGI SNP Detail
Alliance Variant
Chr2:92813982 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 480 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27382468
MGI SNP Detail
Alliance Variant
Chr2:92814024 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 522 bp distal
SNP C/T T T T T T T C T T T C T T C T
rs225228252
MGI SNP Detail
Alliance Variant
Chr2:92814103 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561038 within coordinates of
Rr561039 601 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245224634
MGI SNP Detail
Alliance Variant
Chr2:92814254 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 752 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214667392
MGI SNP Detail
Alliance Variant
Chr2:92814271 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 769 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs579703384
MGI SNP Detail
Alliance Variant
Chr2:92814279 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 777 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27382467
MGI SNP Detail
Alliance Variant
Chr2:92814288 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 786 bp distal
SNP C/T C C C C C C C C C C T C C C C
rs27382466
MGI SNP Detail
Alliance Variant
Chr2:92814291 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 789 bp distal
SNP A/G G G A G G G G G G G G G G G G G G
rs27382465
MGI SNP Detail
Alliance Variant
Chr2:92814311 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 809 bp distal
SNP C/T T T T T T T C T T T C T T C T
rs217671460
MGI SNP Detail
Alliance Variant
Chr2:92814392 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 890 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240025049
MGI SNP Detail
Alliance Variant
Chr2:92814448 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 946 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27382464
MGI SNP Detail
Alliance Variant
Chr2:92814456 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 954 bp distal
SNP C/T C C C C C C C C C T C C T C
rs212555927
MGI SNP Detail
Alliance Variant
Chr2:92814472 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 970 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs231221809
MGI SNP Detail
Alliance Variant
Chr2:92814483 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 981 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250337321
MGI SNP Detail
Alliance Variant
Chr2:92814517 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1015 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220655774
MGI SNP Detail
Alliance Variant
Chr2:92814533 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1031 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27382463
MGI SNP Detail
Alliance Variant
Chr2:92814535 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1033 bp distal
SNP C/T C C C C C C C C C T C C T C
rs260269738
MGI SNP Detail
Alliance Variant
Chr2:92814604 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1102 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226268643
MGI SNP Detail
Alliance Variant
Chr2:92814641 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1139 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248458386
MGI SNP Detail
Alliance Variant
Chr2:92814644 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1142 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264674206
MGI SNP Detail
Alliance Variant
Chr2:92814660 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1158 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225098857
MGI SNP Detail
Alliance Variant
Chr2:92814749 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1247 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239101195
MGI SNP Detail
Alliance Variant
Chr2:92814869 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1367 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27382462
MGI SNP Detail
Alliance Variant
Chr2:92814915 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1413 bp distal
SNP A/G A A A A A A G A A A G A A G A
rs27382461
MGI SNP Detail
Alliance Variant
Chr2:92814978 Prdm11 Intron
Prdm11 Noncoding-Transcript-Variant
Rr561039 1476 bp distal
SNP C/T T T C C T T C T T C T C C T C C T T
rs258723042
MGI SNP Detail
Alliance Variant
Chr2:92815067 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1565 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218643302
MGI SNP Detail
Alliance Variant
Chr2:92815117 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1615 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235742920
MGI SNP Detail
Alliance Variant
Chr2:92815187 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1685 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248809134
MGI SNP Detail
Alliance Variant
Chr2:92815248 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1746 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212582147
MGI SNP Detail
Alliance Variant
Chr2:92815254 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1752 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29819523
MGI SNP Detail
Alliance Variant
Chr2:92815293 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1791 bp distal
SNP A/G G G A G G A G
rs250299470
MGI SNP Detail
Alliance Variant
Chr2:92815300 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1798 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27382460
MGI SNP Detail
Alliance Variant
Chr2:92815314 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1812 bp distal
SNP A/C A A C C A A C A A A C A C A A C A A A
rs233505978
MGI SNP Detail
Alliance Variant
Chr2:92815320 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1818 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27382459
MGI SNP Detail
Alliance Variant
Chr2:92815372 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1870 bp distal
SNP A/T T T A A T T A T A T A T A A T A A T T
rs226629753
MGI SNP Detail
Alliance Variant
Chr2:92815458 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1956 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs243989203
MGI SNP Detail
Alliance Variant
Chr2:92815485 Prdm11 Intron
Prdm11 mRNA-UTR
Prdm11 Noncoding-Transcript-Variant
Rr561039 1983 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 86 of 86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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