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Mouse SNP Summary
Symbol
Name
ID
Rr561284
regulatory region 561284
MGI:8023416

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27397875
MGI SNP Detail
Alliance Variant
Chr2:93640410 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1993 bp proximal
SNP C/T C C C C C C C C C C C C C C T
rs262560629
MGI SNP Detail
Alliance Variant
Chr2:93640443 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1960 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27397874
MGI SNP Detail
Alliance Variant
Chr2:93640446 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1957 bp proximal
SNP G/T T T T G T G T G
rs29518716
MGI SNP Detail
Alliance Variant
Chr2:93640451 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1952 bp proximal
SNP A/G A A G A G
rs252541366
MGI SNP Detail
Alliance Variant
Chr2:93640468 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561282 within coordinates of
Rr561284 1935 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217516983
MGI SNP Detail
Alliance Variant
Chr2:93640479 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1924 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T C
rs216243298
MGI SNP Detail
Alliance Variant
Chr2:93640560 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561281 within coordinates of
Rr561284 1843 bp proximal
SNP C/T T C
rs27397873
MGI SNP Detail
Alliance Variant
Chr2:93640620 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1783 bp proximal
SNP G/T G G G G G G G G G G G G G G T
rs27397872
MGI SNP Detail
Alliance Variant
Chr2:93640670 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1733 bp proximal
SNP A/C C C C C C C C C C C C C C C A
rs27397871
MGI SNP Detail
Alliance Variant
Chr2:93640702 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1701 bp proximal
SNP A/T A A A A A A A A A A T A A T T
rs261855591
MGI SNP Detail
Alliance Variant
Chr2:93640712 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1691 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223353300
MGI SNP Detail
Alliance Variant
Chr2:93640744 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1659 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs578657797
MGI SNP Detail
Alliance Variant
Chr2:93640778 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1625 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239978684
MGI SNP Detail
Alliance Variant
Chr2:93640801 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1602 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27397870
MGI SNP Detail
Alliance Variant
Chr2:93640940 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1463 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs222515105
MGI SNP Detail
Alliance Variant
Chr2:93641043 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1360 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242650447
MGI SNP Detail
Alliance Variant
Chr2:93641047 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1356 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C
rs27397869
MGI SNP Detail
Alliance Variant
Chr2:93641087 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1316 bp proximal
SNP C/T C C C C C C T C C C T C C T T
rs27397868
MGI SNP Detail
Alliance Variant
Chr2:93641109 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1294 bp proximal
SNP C/T C C C T T C T T T T C C T T C T T T
rs242256418
MGI SNP Detail
Alliance Variant
Chr2:93641128 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1275 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265100707
MGI SNP Detail
Alliance Variant
Chr2:93641159 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1244 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231241392
MGI SNP Detail
Alliance Variant
Chr2:93641277 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1126 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49127525
MGI SNP Detail
Alliance Variant
Chr2:93641292 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1111 bp proximal
SNP A/G A G A G
rs48671343
MGI SNP Detail
Alliance Variant
Chr2:93641296 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1107 bp proximal
SNP G/T T G T G
rs228712277
MGI SNP Detail
Alliance Variant
Chr2:93641305 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1098 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247711104
MGI SNP Detail
Alliance Variant
Chr2:93641318 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1085 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211838275
MGI SNP Detail
Alliance Variant
Chr2:93641320 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1083 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224152068
MGI SNP Detail
Alliance Variant
Chr2:93641348 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1055 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250363412
MGI SNP Detail
Alliance Variant
Chr2:93641373 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1030 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C A C C C C A C C C C C C C C C C C C
rs46351035
MGI SNP Detail
Alliance Variant
Chr2:93641377 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1026 bp proximal
SNP C/T T C T C
rs51250905
MGI SNP Detail
Alliance Variant
Chr2:93641383 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1020 bp proximal
SNP A/G G A G A
rs263319098
MGI SNP Detail
Alliance Variant
Chr2:93641400 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1003 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216669168
MGI SNP Detail
Alliance Variant
Chr2:93641403 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1000 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236254000
MGI SNP Detail
Alliance Variant
Chr2:93641453 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 950 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249522842
MGI SNP Detail
Alliance Variant
Chr2:93641460 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 943 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218297217
MGI SNP Detail
Alliance Variant
Chr2:93641477 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 926 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245265072
MGI SNP Detail
Alliance Variant
Chr2:93641512 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 891 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46779322
MGI SNP Detail
Alliance Variant
Chr2:93641547 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 856 bp proximal
SNP G/T G G G G T G G G T T T T T T G G G G G G G G G T G T T G G G G G G G G G G
rs223360322
MGI SNP Detail
Alliance Variant
Chr2:93641647 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 756 bp proximal
SNP A/G A G
rs223191917
MGI SNP Detail
Alliance Variant
Chr2:93641648 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 755 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245359396
MGI SNP Detail
Alliance Variant
Chr2:93641671 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 732 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258450139
MGI SNP Detail
Alliance Variant
Chr2:93641685 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 718 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228887208
MGI SNP Detail
Alliance Variant
Chr2:93641694 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 709 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241810941
MGI SNP Detail
Alliance Variant
Chr2:93641716 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 687 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254182456
MGI SNP Detail
Alliance Variant
Chr2:93641732 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 671 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224070941
MGI SNP Detail
Alliance Variant
Chr2:93641766 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 637 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254931979
MGI SNP Detail
Alliance Variant
Chr2:93641767 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 636 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214524699
MGI SNP Detail
Alliance Variant
Chr2:93641833 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 570 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C T C C C C T C C C C C C C T C C C C
rs231677788
MGI SNP Detail
Alliance Variant
Chr2:93641835 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 568 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs252853026
MGI SNP Detail
Alliance Variant
Chr2:93641839 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 564 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216657767
MGI SNP Detail
Alliance Variant
Chr2:93641856 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 547 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236390220
MGI SNP Detail
Alliance Variant
Chr2:93641976 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 427 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249459156
MGI SNP Detail
Alliance Variant
Chr2:93642068 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 335 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27397867
MGI SNP Detail
Alliance Variant
Chr2:93642172 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 231 bp proximal
SNP A/G A A A G G A G G G G G A A G G A G G G
rs582657453
MGI SNP Detail
Alliance Variant
Chr2:93642189 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 214 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236108588
MGI SNP Detail
Alliance Variant
Chr2:93642227 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 176 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33529710
MGI SNP Detail
Alliance Variant
Chr2:93642389 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 14 bp proximal
SNP C/T C T C C C
rs223644909
MGI SNP Detail
Alliance Variant
Chr2:93642431 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 7 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48277587
MGI SNP Detail
Alliance Variant
Chr2:93642606 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 182 bp distal
SNP A/G A G A G
rs252049367
MGI SNP Detail
Alliance Variant
Chr2:93642615 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 191 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs242770686
MGI SNP Detail
Alliance Variant
Chr2:93642619 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 195 bp distal
SNP G G G
rs241938967
MGI SNP Detail
Alliance Variant
Chr2:93642650 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 226 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254261964
MGI SNP Detail
Alliance Variant
Chr2:93642718 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 294 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32923699
MGI SNP Detail
Alliance Variant
Chr2:93642856 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 432 bp distal
SNP C/T T C T C
rs243496512
MGI SNP Detail
Alliance Variant
Chr2:93642875 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 451 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265223403
MGI SNP Detail
Alliance Variant
Chr2:93642882 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 458 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231480740
MGI SNP Detail
Alliance Variant
Chr2:93642887 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 463 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27397866
MGI SNP Detail
Alliance Variant
Chr2:93642902 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 478 bp distal
SNP C/G/T G G T T T C T T G C T C T C
rs260391648
MGI SNP Detail
Alliance Variant
Chr2:93642915 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 491 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228956259
MGI SNP Detail
Alliance Variant
Chr2:93642950 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 526 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243470954
MGI SNP Detail
Alliance Variant
Chr2:93642970 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 546 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51861337
MGI SNP Detail
Alliance Variant
Chr2:93642982 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 558 bp distal
SNP T T T T T
rs237842708
MGI SNP Detail
Alliance Variant
Chr2:93642999 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 575 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G A G G G G A G G G G G G G G G G G G
rs29716668
MGI SNP Detail
Alliance Variant
Chr2:93643004 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 580 bp distal
SNP A/C C C A C A
rs215353057
MGI SNP Detail
Alliance Variant
Chr2:93643012 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 588 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A G A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238091329
MGI SNP Detail
Alliance Variant
Chr2:93643087 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 663 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251990277
MGI SNP Detail
Alliance Variant
Chr2:93643097 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 673 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T C T T T T C T T T T T T T T T T T T
rs221989134
MGI SNP Detail
Alliance Variant
Chr2:93643111 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 687 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235280619
MGI SNP Detail
Alliance Variant
Chr2:93643129 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 705 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248487371
MGI SNP Detail
Alliance Variant
Chr2:93643155 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 731 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52352953
MGI SNP Detail
Alliance Variant
Chr2:93643223 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 799 bp distal
SNP A/G G A
rs33081114
MGI SNP Detail
Alliance Variant
Chr2:93643257 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 833 bp distal
SNP A/G A A G
rs27397865
MGI SNP Detail
Alliance Variant
Chr2:93643482 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1058 bp distal
SNP G/T T T T T T T T T T T G
rs262928469
MGI SNP Detail
Alliance Variant
Chr2:93643576 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1152 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252777905
MGI SNP Detail
Alliance Variant
Chr2:93643594 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1170 bp distal
SNP C/G G C
rs27397864
MGI SNP Detail
Alliance Variant
Chr2:93643647 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1223 bp distal
SNP A/G A A A A A A G A A A A A A A A A A G
rs29820815
MGI SNP Detail
Alliance Variant
Chr2:93643653 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1229 bp distal
SNP A/T T T A T A
rs228905079
MGI SNP Detail
Alliance Variant
Chr2:93643788 Ext2 Coding-Synonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1364 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243214059
MGI SNP Detail
Alliance Variant
Chr2:93643800 Ext2 Coding-Synonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1376 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264854397
MGI SNP Detail
Alliance Variant
Chr2:93643806 Ext2 Coding-Synonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1382 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs229965545
MGI SNP Detail
Alliance Variant
Chr2:93644016 Cpgi11950 within coordinates of
Ext2 Coding-Synonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1592 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256111826
MGI SNP Detail
Alliance Variant
Chr2:93644063 Ext2 Coding-NonSynonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1639 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T C T T T T C T T T T T T T C T T T T
rs215588471
MGI SNP Detail
Alliance Variant
Chr2:93644106 Ext2 Coding-Synonymous
Ext2 Noncoding-Transcript-Variant
Rr561284 1682 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C T C C C C T C C C C C C C C C C C C
rs240896731
MGI SNP Detail
Alliance Variant
Chr2:93644285 Ext2 mRNA-UTR
Ext2 Noncoding-Transcript-Variant
Rr561284 1861 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246111902
MGI SNP Detail
Alliance Variant
Chr2:93644349 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1925 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216841383
MGI SNP Detail
Alliance Variant
Chr2:93644365 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1941 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C A
rs235221381
MGI SNP Detail
Alliance Variant
Chr2:93644385 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1961 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G T G G G T
rs248266525
MGI SNP Detail
Alliance Variant
Chr2:93644408 Ext2 Intron
Ext2 Noncoding-Transcript-Variant
Rr561284 1984 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 98 of 98

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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