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Mouse SNP Summary
Symbol
Name
ID 		Rr561526
regulatory region 561526
MGI:8023658

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27362129
MGI SNP Detail		 Chr2:101467961 Rr561526 1995 bp proximal
 SNP C/T T C T T T T C T T C C C T T C T T
rs583972053
MGI SNP Detail		 Chr2:101467977 Rr561526 1979 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217815555
MGI SNP Detail		 Chr2:101468163 Rr561526 1793 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs47204468
MGI SNP Detail		 Chr2:101468188 Rr561526 1768 bp proximal
 SNP C/T T T C
rs260020357
MGI SNP Detail		 Chr2:101468220 Rr561526 1736 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs228669369
MGI SNP Detail		 Chr2:101468263 Rr561526 1693 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs246660014
MGI SNP Detail		 Chr2:101468264 Rr561526 1692 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs52024647
MGI SNP Detail		 Chr2:101468276 Rr561526 1680 bp proximal
 SNP C/T C C T
rs47833974
MGI SNP Detail		 Chr2:101468278 Rr561526 1678 bp proximal
 SNP A/G A G G A
rs255682517
MGI SNP Detail		 Chr2:101468326 Rr561526 1630 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262153365
MGI SNP Detail		 Chr2:101468329 Rr561526 1627 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49265857
MGI SNP Detail		 Chr2:101468359 Rr561526 1597 bp proximal
 SNP A/G G A A G
rs249072572
MGI SNP Detail		 Chr2:101468428 Rr561526 1528 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32908324
MGI SNP Detail		 Chr2:101468438 Rr561526 1518 bp proximal
 SNP C/T C T C T C
rs234533805
MGI SNP Detail		 Chr2:101468447 Rr561526 1509 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs27362128
MGI SNP Detail		 Chr2:101468487 Rr561526 1469 bp proximal
 SNP A/G A A A A A A A A A A G A A G A
rs27362127
MGI SNP Detail		 Chr2:101468569 Rr561526 1387 bp proximal
 SNP A/G G G A G G G G G G G G A A G G G G G G
rs29539464
MGI SNP Detail
Alliance Variant		 Chr2:101468603 Rag1 mRNA-UTR
Rr561526 1353 bp proximal
 SNP A/G G A G A G
rs261487745
MGI SNP Detail
Alliance Variant		 Chr2:101468649 Rag1 mRNA-UTR
Rr561526 1307 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217962464
MGI SNP Detail
Alliance Variant		 Chr2:101468776 Rag1 mRNA-UTR
Rr561526 1180 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235025332
MGI SNP Detail
Alliance Variant		 Chr2:101468810 Rag1 mRNA-UTR
Rr561526 1146 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252528357
MGI SNP Detail
Alliance Variant		 Chr2:101468852 Rag1 mRNA-UTR
Rr561526 1104 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27362126
MGI SNP Detail
Alliance Variant		 Chr2:101468916 Rag1 mRNA-UTR
Rr561526 1040 bp proximal
 SNP A/T T A T T T T T T T A T T T T T T
rs249327929
MGI SNP Detail
Alliance Variant		 Chr2:101468918 Rag1 mRNA-UTR
Rr561526 1038 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263272891
MGI SNP Detail
Alliance Variant		 Chr2:101468956 Rag1 mRNA-UTR
Rr561526 1000 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223176270
MGI SNP Detail
Alliance Variant		 Chr2:101468983 Rag1 mRNA-UTR
Rr561526 973 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243257870
MGI SNP Detail
Alliance Variant		 Chr2:101469015 Rag1 mRNA-UTR
Rr561526 941 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257100084
MGI SNP Detail
Alliance Variant		 Chr2:101469024 Rag1 mRNA-UTR
Rr561526 932 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236607579
MGI SNP Detail
Alliance Variant		 Chr2:101469071 Rag1 mRNA-UTR
Rr561526 885 bp proximal
 SNP A/C A C
rs260405130
MGI SNP Detail
Alliance Variant		 Chr2:101469072 Rag1 mRNA-UTR
Rr561526 884 bp proximal
 SNP C/T C T
rs260850981
MGI SNP Detail
Alliance Variant		 Chr2:101469082 Rag1 mRNA-UTR
Rr561526 874 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs232668556
MGI SNP Detail
Alliance Variant		 Chr2:101469085 Rag1 mRNA-UTR
Rr561526 871 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256925902
MGI SNP Detail
Alliance Variant		 Chr2:101469108 Rag1 mRNA-UTR
Rr561526 848 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217516761
MGI SNP Detail
Alliance Variant		 Chr2:101469117 Rag1 mRNA-UTR
Rr561526 839 bp proximal
 SNP A/G A G
rs237615512
MGI SNP Detail
Alliance Variant		 Chr2:101469162 Rag1 mRNA-UTR
Rr561526 794 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249583272
MGI SNP Detail
Alliance Variant		 Chr2:101469173 Rag1 mRNA-UTR
Rr561526 783 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs587323162
MGI SNP Detail
Alliance Variant		 Chr2:101469189 Rag1 mRNA-UTR
Rr561526 767 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs49277109
MGI SNP Detail
Alliance Variant		 Chr2:101469198 Rag1 mRNA-UTR
Rr561526 758 bp proximal
 SNP G/T G T
rs235149961
MGI SNP Detail
Alliance Variant		 Chr2:101469201 Rag1 mRNA-UTR
Rr561526 755 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs51399503
MGI SNP Detail
Alliance Variant		 Chr2:101469221 Rag1 mRNA-UTR
Rr561526 735 bp proximal
 SNP A/G G A
rs48535802
MGI SNP Detail
Alliance Variant		 Chr2:101469257 Rag1 mRNA-UTR
Rr561526 699 bp proximal
 SNP C/T T C
rs237754609
MGI SNP Detail
Alliance Variant		 Chr2:101469292 Rag1 mRNA-UTR
Rr561526 664 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580080069
MGI SNP Detail
Alliance Variant		 Chr2:101469322 Rag1 mRNA-UTR
Rr561526 634 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs45904890
MGI SNP Detail
Alliance Variant		 Chr2:101469338 Rag1 mRNA-UTR
Rr561526 618 bp proximal
 SNP C/T C T C
rs45838254
MGI SNP Detail
Alliance Variant		 Chr2:101469340 Rag1 mRNA-UTR
Rr561526 616 bp proximal
 SNP A/C C A C A C
rs27362125
MGI SNP Detail
Alliance Variant		 Chr2:101469399 Rag1 mRNA-UTR
Rr561526 557 bp proximal
 SNP C/G G G G G G G G G G G C G G C G
rs223661051
MGI SNP Detail
Alliance Variant		 Chr2:101469424 Rag1 mRNA-UTR
Rr561526 532 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49503950
MGI SNP Detail
Alliance Variant		 Chr2:101469454 Rag1 mRNA-UTR
Rr561526 502 bp proximal
 SNP C/T C T C T C
rs50813814
MGI SNP Detail
Alliance Variant		 Chr2:101469467 Rag1 mRNA-UTR
Rr561526 489 bp proximal
 SNP A/G G A G A G
rs218264875
MGI SNP Detail
Alliance Variant		 Chr2:101469480 Rag1 mRNA-UTR
Rr561526 476 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243105865
MGI SNP Detail
Alliance Variant		 Chr2:101469500 Rag1 mRNA-UTR
Rr561526 456 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50691780
MGI SNP Detail
Alliance Variant		 Chr2:101469529 Rag1 mRNA-UTR
Rr561526 427 bp proximal
 SNP A/G A G A G A
rs47537199
MGI SNP Detail
Alliance Variant		 Chr2:101469533 Rag1 mRNA-UTR
Rr561526 423 bp proximal
 SNP C/T T C T C T
rs583529987
MGI SNP Detail
Alliance Variant		 Chr2:101469534 Rag1 mRNA-UTR
Rr561526 422 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245685096
MGI SNP Detail
Alliance Variant		 Chr2:101469536 Rag1 mRNA-UTR
Rr561526 420 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265216110
MGI SNP Detail
Alliance Variant		 Chr2:101469538 Rag1 mRNA-UTR
Rr561526 418 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G G
rs229567608
MGI SNP Detail
Alliance Variant		 Chr2:101469561 Rag1 mRNA-UTR
Rr561526 395 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs242887201
MGI SNP Detail
Alliance Variant		 Chr2:101469573 Rag1 mRNA-UTR
Rr561526 383 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46528061
MGI SNP Detail
Alliance Variant		 Chr2:101469605 Rag1 mRNA-UTR
Rr561526 351 bp proximal
 SNP C/T C T
rs27362124
MGI SNP Detail
Alliance Variant		 Chr2:101469799 Rag1 mRNA-UTR
Rr561526 157 bp proximal
 SNP A/C C C C C C C C C C A C C A C
rs50197875
MGI SNP Detail
Alliance Variant		 Chr2:101469813 Rag1 mRNA-UTR
Rr561526 143 bp proximal
 SNP A/T A T A T A
rs27362123
MGI SNP Detail
Alliance Variant		 Chr2:101469834 Rag1 mRNA-UTR
Rr561526 122 bp proximal
 SNP C/T C C T C C C C T C C T T T C C T C C
rs51562156
MGI SNP Detail
Alliance Variant		 Chr2:101469838 Rag1 mRNA-UTR
Rr561526 118 bp proximal
 SNP A/G G A G A
rs108747244
MGI SNP Detail
Alliance Variant		 Chr2:101469874 Rag1 mRNA-UTR
Rr561526 82 bp proximal
 SNP A/G A G A G G A
rs27362122
MGI SNP Detail
Alliance Variant		 Chr2:101469957 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP C/T C C T C C C C C C T T C T C C C C
rs27362121
MGI SNP Detail
Alliance Variant		 Chr2:101469958 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP A/G G G G G G G A G G A G G A G
rs250650435
MGI SNP Detail
Alliance Variant		 Chr2:101470021 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46549781
MGI SNP Detail
Alliance Variant		 Chr2:101470052 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP A/G G A G G A
rs27362120
MGI SNP Detail
Alliance Variant		 Chr2:101470208 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP A/G G G A G G G G G G G A A G A G G G G G
rs27362119
MGI SNP Detail
Alliance Variant		 Chr2:101470247 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP C/T T T C T T T T C T T C C C C T T C T T
rs27362118
MGI SNP Detail
Alliance Variant		 Chr2:101470321 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP A/G G G A G G G G G G G G A A G A G G G G G
rs248445001
MGI SNP Detail
Alliance Variant		 Chr2:101470327 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262902892
MGI SNP Detail
Alliance Variant		 Chr2:101470368 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230597638
MGI SNP Detail
Alliance Variant		 Chr2:101470473 Rag1 mRNA-UTR
Rr561526 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236448313
MGI SNP Detail
Alliance Variant		 Chr2:101470514 Rag1 mRNA-UTR
Rr561526 22 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27362117
MGI SNP Detail
Alliance Variant		 Chr2:101470535 Rag1 mRNA-UTR
Rr561526 43 bp distal
 SNP A/T T A T T T T T T T A T T T T T
rs27362116
MGI SNP Detail
Alliance Variant		 Chr2:101470578 Rag1 mRNA-UTR
Rr561526 86 bp distal
Tssr25365 within coordinates of
 SNP A/G A G A A A A G A A G G G G A A G A A
rs27362115
MGI SNP Detail
Alliance Variant		 Chr2:101470671 Rag1 mRNA-UTR
Rr561526 179 bp distal
 SNP A/T A T T T T A T T A A A A T T A T T
rs246421469
MGI SNP Detail
Alliance Variant		 Chr2:101470675 Rag1 mRNA-UTR
Rr561526 183 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216823283
MGI SNP Detail
Alliance Variant		 Chr2:101470681 Rag1 mRNA-UTR
Rr561526 189 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A
rs27362114
MGI SNP Detail
Alliance Variant		 Chr2:101470744 Rag1 mRNA-UTR
Rr561526 252 bp distal
 SNP A/G A G A A A A G A G G G G G A G G A A
rs256301099
MGI SNP Detail
Alliance Variant		 Chr2:101470774 Rag1 mRNA-UTR
Rr561526 282 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213605826
MGI SNP Detail
Alliance Variant		 Chr2:101470781 Rag1 mRNA-UTR
Rr561526 289 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230489110
MGI SNP Detail
Alliance Variant		 Chr2:101470786 Rag1 mRNA-UTR
Rr561526 294 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250569828
MGI SNP Detail
Alliance Variant		 Chr2:101470858 Rag1 mRNA-UTR
Rr561526 366 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27362113
MGI SNP Detail
Alliance Variant		 Chr2:101470968 Rag1 mRNA-UTR
Rr561526 476 bp distal
 SNP G/T T G T T T T T T G G T G T T T T T
rs27362112
MGI SNP Detail
Alliance Variant		 Chr2:101471007 Rag1 mRNA-UTR
Rr561526 515 bp distal
 SNP A/G A A G A A A A G A A G G G G A A G A A
rs27362111
MGI SNP Detail
Alliance Variant		 Chr2:101471058 Rag1 mRNA-UTR
Rr561526 566 bp distal
 SNP A/G G G A G G G G A G G A A A A G G A G G
rs27362110
MGI SNP Detail
Alliance Variant		 Chr2:101471086 Rag1 mRNA-UTR
Rr561526 594 bp distal
 SNP G/T T T G T T T T T T G G T T G T T
rs245798930
MGI SNP Detail
Alliance Variant		 Chr2:101471088 Rag1 mRNA-UTR
Rr561526 596 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27362109
MGI SNP Detail
Alliance Variant		 Chr2:101471107 Rag1 mRNA-UTR
Rr561526 615 bp distal
 SNP C/T C C T C C C C C C T T C C T C C
rs52033912
MGI SNP Detail
Alliance Variant		 Chr2:101471137 Rag1 mRNA-UTR
Rr561526 645 bp distal
 SNP A/G A G A G A
rs48490459
MGI SNP Detail
Alliance Variant		 Chr2:101471151 Rag1 mRNA-UTR
Rr561526 659 bp distal
 SNP A/G G A G A G
rs253670985
MGI SNP Detail
Alliance Variant		 Chr2:101471159 Rag1 mRNA-UTR
Rr561526 667 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27362108
MGI SNP Detail
Alliance Variant		 Chr2:101471230 Rag1 mRNA-UTR
Rr561526 738 bp distal
 SNP C/T T C T C T C C C T
rs27362107
MGI SNP Detail
Alliance Variant		 Chr2:101471300 Rag1 mRNA-UTR
Rr561526 808 bp distal
 SNP A/G G G A G G G G A G G A A A G G A G G
rs46746605
MGI SNP Detail
Alliance Variant		 Chr2:101471393 Rag1 mRNA-UTR
Rr561526 901 bp distal
 SNP A/C A C A C A
rs231788374
MGI SNP Detail
Alliance Variant		 Chr2:101471408 Rag1 mRNA-UTR
Rr561526 916 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50866773
MGI SNP Detail
Alliance Variant		 Chr2:101471410 Rag1 mRNA-UTR
Rr561526 918 bp distal
 SNP C/G C G C G C
rs265065341
MGI SNP Detail
Alliance Variant		 Chr2:101471411 Rag1 mRNA-UTR
Rr561526 919 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 123
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory