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Mouse SNP Summary
Symbol
Name
ID
Rr561703
regulatory region 561703
MGI:8023835

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Showing SNP(s) 1 - 100 of 139

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214029959
MGI SNP Detail
Chr2:102378004 Rr561703 1972 bp proximal
SNP A/T A T
rs49776538
MGI SNP Detail
Chr2:102378011 Rr561703 1965 bp proximal
SNP C/T C C T
rs27361765
MGI SNP Detail
Chr2:102378038 Rr561703 1938 bp proximal
SNP C/G G G C G G G G C G G C G G G G
rs27361764
MGI SNP Detail
Chr2:102378083 Rr561703 1893 bp proximal
SNP A/G G G G G G A G G G G G
rs48143334
MGI SNP Detail
Chr2:102378097 Rr561703 1879 bp proximal
SNP A/T T T A
rs46564940
MGI SNP Detail
Chr2:102378123 Rr561703 1853 bp proximal
SNP A/G A A G
rs45680878
MGI SNP Detail
Chr2:102378124 Rr561703 1852 bp proximal
SNP A/G A A G
rs233968111
MGI SNP Detail
Chr2:102378187 Rr561703 1789 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216758500
MGI SNP Detail
Chr2:102378192 Rr561703 1784 bp proximal
SNP A/G G A
rs50656153
MGI SNP Detail
Chr2:102378202 Rr561703 1774 bp proximal
SNP C/T T T C
rs50841623
MGI SNP Detail
Chr2:102378245 Rr561703 1731 bp proximal
SNP G/T T T G
rs48566485
MGI SNP Detail
Chr2:102378256 Rr561703 1720 bp proximal
SNP A/T A A T
rs226950321
MGI SNP Detail
Chr2:102378267 Rr561703 1709 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46507931
MGI SNP Detail
Chr2:102378297 Rr561703 1679 bp proximal
SNP A/G G G A
rs251896847
MGI SNP Detail
Chr2:102378329 Rr561703 1647 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46888274
MGI SNP Detail
Chr2:102378340 Rr561703 1636 bp proximal
SNP A/G G G A
rs238371100
MGI SNP Detail
Chr2:102378414 Rr561703 1562 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27361763
MGI SNP Detail
Chr2:102378498 Rr561703 1478 bp proximal
SNP A/T T T T T T A T T T T T
rs224022017
MGI SNP Detail
Chr2:102378573 Rr561703 1403 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27361762
MGI SNP Detail
Chr2:102378597 Rr561703 1379 bp proximal
SNP A/C C C C C C C C C C C C A A
rs250355050
MGI SNP Detail
Chr2:102378614 Rr561703 1362 bp proximal
SNP A/G A G
rs263736075
MGI SNP Detail
Chr2:102378617 Rr561703 1359 bp proximal
SNP A/T T A
rs254204652
MGI SNP Detail
Chr2:102378646 Rr561703 1330 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs47056853
MGI SNP Detail
Chr2:102378760 Rr561703 1216 bp proximal
SNP T T T T
rs227713040
MGI SNP Detail
Chr2:102378764 Rr561703 1212 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52240974
MGI SNP Detail
Chr2:102378775 Rr561703 1201 bp proximal
SNP A/G A A A A A A G G A A A A A A A A A A A A G A A G G A A A A A A G A A G A A A A A A A A A A G A A A A A A A
rs244269257
MGI SNP Detail
Chr2:102378810 Rr561703 1166 bp proximal
SNP C/G G C
rs586511967
MGI SNP Detail
Chr2:102378823 Rr561703 1153 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579403175
MGI SNP Detail
Chr2:102378860 Rr561703 1116 bp proximal
SNP C/T C T C C C T C C C C C C C C C T C T C C T T C C C T C C T T C C C T C T C T C C C
rs581157999
MGI SNP Detail
Chr2:102378868 Rr561703 1108 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs255762354
MGI SNP Detail
Chr2:102378879 Rr561703 1097 bp proximal
SNP A/T A T
rs586370956
MGI SNP Detail
Chr2:102378906 Rr561703 1070 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579828674
MGI SNP Detail
Chr2:102378928 Rr561703 1048 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235519090
MGI SNP Detail
Chr2:102379055 Rr561703 921 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260996945
MGI SNP Detail
Chr2:102379075 Rr561703 901 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49697241
MGI SNP Detail
Chr2:102379120 Rr561703 856 bp proximal
SNP C/G G C G C
rs27361761
MGI SNP Detail
Chr2:102379153 Rr561703 823 bp proximal
SNP C/T T T T T T C T T T T T
rs49444639
MGI SNP Detail
Chr2:102379173 Rr561703 803 bp proximal
SNP C/T C T T T T
rs260127026
MGI SNP Detail
Chr2:102379189 Rr561703 787 bp proximal
SNP C/G G C
rs233401873
MGI SNP Detail
Chr2:102379190 Rr561703 786 bp proximal
SNP A/T T A
rs46029069
MGI SNP Detail
Chr2:102379232 Rr561703 744 bp proximal
SNP C/T T C T C T
rs216466024
MGI SNP Detail
Chr2:102379249 Rr561703 727 bp proximal
SNP A/G A G
rs220615373
MGI SNP Detail
Chr2:102379338 Rr561703 638 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50665373
MGI SNP Detail
Chr2:102379371 Rr561703 605 bp proximal
SNP C/G G C
rs266068821
MGI SNP Detail
Chr2:102379374 Rr561703 602 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51974091
MGI SNP Detail
Chr2:102379391 Rr561703 585 bp proximal
SNP A/G G A A G
rs45786977
MGI SNP Detail
Chr2:102379434 Rr561703 542 bp proximal
SNP A/G G A A G
rs46058824
MGI SNP Detail
Chr2:102379438 Rr561703 538 bp proximal
SNP A/G G A A G
rs227681730
MGI SNP Detail
Chr2:102379441 Rr561703 535 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51895663
MGI SNP Detail
Chr2:102379472 Rr561703 504 bp proximal
SNP A/C C A A C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257926328
MGI SNP Detail
Chr2:102379509 Rr561703 467 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50737905
MGI SNP Detail
Chr2:102379530 Rr561703 446 bp proximal
SNP A/G A G G A
rs47253029
MGI SNP Detail
Chr2:102379532 Rr561703 444 bp proximal
SNP A/T T A A T
rs219219344
MGI SNP Detail
Chr2:102379594 Rr561703 382 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239664071
MGI SNP Detail
Chr2:102379599 Rr561703 377 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50318114
MGI SNP Detail
Chr2:102379630 Rr561703 346 bp proximal
SNP C/T T T C
rs27361760
MGI SNP Detail
Chr2:102379650 Rr561703 326 bp proximal
SNP G/T G G G T G G G G G
rs50758430
MGI SNP Detail
Chr2:102379670 Rr561703 306 bp proximal
SNP A/G A A G
rs48900589
MGI SNP Detail
Chr2:102379677 Rr561703 299 bp proximal
SNP C/T T T C
rs51378115
MGI SNP Detail
Chr2:102379723 Rr561703 253 bp proximal
SNP A/G A A G
rs27361759
MGI SNP Detail
Chr2:102379739 Rr561703 237 bp proximal
SNP A/C C C C C C A C C C C C
rs49004030
MGI SNP Detail
Chr2:102379765 Rr561703 211 bp proximal
SNP G/T G T G T
rs46552735
MGI SNP Detail
Chr2:102379785 Rr561703 191 bp proximal
SNP C/T C T C T
rs48186230
MGI SNP Detail
Chr2:102379828 Rr561703 148 bp proximal
SNP C/G C G
rs48191008
MGI SNP Detail
Chr2:102379842 Rr561703 134 bp proximal
SNP C/T C T C T
rs47086841
MGI SNP Detail
Chr2:102379847 Rr561703 129 bp proximal
SNP C/G G C G C
rs240019986
MGI SNP Detail
Chr2:102379858 Rr561703 118 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27361758
MGI SNP Detail
Chr2:102379895 Rr561703 81 bp proximal
SNP A/G A G A A A A G A A G A A A A
rs229266275
MGI SNP Detail
Chr2:102379930 Rr561703 46 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51130373
MGI SNP Detail
Chr2:102379954 Rr561703 22 bp proximal
SNP C/T T C T C
rs264460873
MGI SNP Detail
Chr2:102379960 Rr561703 16 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27361757
MGI SNP Detail
Chr2:102379970 Rr561703 6 bp proximal
SNP C/T C T C C C C T C C T C C C C
rs47220067
MGI SNP Detail
Chr2:102380017 Rr561703 within coordinates of
SNP A/T T A T A
rs48576172
MGI SNP Detail
Chr2:102380018 Rr561703 within coordinates of
SNP C/T C T C T
rs50845078
MGI SNP Detail
Chr2:102380043 Rr561703 within coordinates of
SNP C/T T C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243691497
MGI SNP Detail
Chr2:102380049 Rr561703 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213140033
MGI SNP Detail
Chr2:102380055 Rr561703 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27361756
MGI SNP Detail
Chr2:102380058 Rr561703 within coordinates of
SNP A/G A A A A A G A A
rs264227839
MGI SNP Detail
Chr2:102380131 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27361755
MGI SNP Detail
Chr2:102380134 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/C A A A A A A A A A A A C C
rs27361754
MGI SNP Detail
Chr2:102380144 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/G G G G G G A G G G G G
rs27361753
MGI SNP Detail
Chr2:102380230 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/C C A C C C C C C A A C C C C
rs220043595
MGI SNP Detail
Chr2:102380282 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238650164
MGI SNP Detail
Chr2:102380283 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262511027
MGI SNP Detail
Chr2:102380286 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27361752
MGI SNP Detail
Chr2:102380299 Cpgi11977 within coordinates of
Rr561703 within coordinates of
SNP C/T C C C C C C C C C C C C C T T
rs241878809
MGI SNP Detail
Alliance Variant
Chr2:102380443 Cpgi11977 within coordinates of
Pamr1 mRNA-UTR
Pamr1 Noncoding-Transcript-Variant
Rr561703 76 bp distal
SNP G G G
rs51389014
MGI SNP Detail
Alliance Variant
Chr2:102380444 Cpgi11977 within coordinates of
Pamr1 mRNA-UTR
Pamr1 Noncoding-Transcript-Variant
Rr561703 77 bp distal
Tssr19095 within coordinates of
SNP C/G C G
rs587176877
MGI SNP Detail
Alliance Variant
Chr2:102380473 Cpgi11977 within coordinates of
Pamr1 mRNA-UTR
Pamr1 Noncoding-Transcript-Variant
Rr561703 106 bp distal
Tssr19096 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228482068
MGI SNP Detail
Alliance Variant
Chr2:102380489 Cpgi11977 within coordinates of
Pamr1 mRNA-UTR
Pamr1 Noncoding-Transcript-Variant
Rr561703 122 bp distal
Tssr19097 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581465691
MGI SNP Detail
Alliance Variant
Chr2:102380543 Cpgi11977 within coordinates of
Pamr1 Coding-Synonymous
Pamr1 Noncoding-Transcript-Variant
Rr561703 176 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259352929
MGI SNP Detail
Alliance Variant
Chr2:102380634 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 267 bp distal
SNP C/T C T
rs216344283
MGI SNP Detail
Alliance Variant
Chr2:102380649 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 282 bp distal
SNP C/G C G
rs232267685
MGI SNP Detail
Alliance Variant
Chr2:102380656 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 289 bp distal
SNP A/G A G
rs255544550
MGI SNP Detail
Alliance Variant
Chr2:102380707 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 340 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27361751
MGI SNP Detail
Alliance Variant
Chr2:102380723 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 356 bp distal
SNP C/T C C T C C C C C C C T T C C C C
rs228008294
MGI SNP Detail
Alliance Variant
Chr2:102380737 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 370 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254648605
MGI SNP Detail
Alliance Variant
Chr2:102380870 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 503 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27361750
MGI SNP Detail
Alliance Variant
Chr2:102380906 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 539 bp distal
SNP G/T G G T G G G G G G G T T G G G G
rs27361749
MGI SNP Detail
Alliance Variant
Chr2:102380959 Pamr1 Intron
Pamr1 Noncoding-Transcript-Variant
Rr561703 592 bp distal
SNP A/G A A G A A A A A A A G G A A A A
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Showing SNP(s) 1 - 100 of 139

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory