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Mouse SNP Summary
Symbol
Name
ID
Rr562291
regulatory region 562291
MGI:8024423

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Showing SNP(s) 1 - 62 of 62

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SNP Density Heatmap
Chr2 from 105,629,094 bp to 105,633,557 bp
(4,464 bp)
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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27428922
MGI SNP Detail
Alliance Variant
Chr2:105629170 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1924 bp proximal
SNP C/T C C C C T C C C C T C C C C
rs6192175
MGI SNP Detail
Alliance Variant
Chr2:105629219 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1875 bp proximal
SNP C/T C T
rs6192189
MGI SNP Detail
Alliance Variant
Chr2:105629227 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1867 bp proximal
SNP C/T C C C C T C C T C C C T C C T C
rs230784814
MGI SNP Detail
Alliance Variant
Chr2:105629364 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1730 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243469277
MGI SNP Detail
Alliance Variant
Chr2:105629384 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1710 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212866043
MGI SNP Detail
Alliance Variant
Chr2:105629478 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1616 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs6193806
MGI SNP Detail
Alliance Variant
Chr2:105629557 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1537 bp proximal
SNP G/T T T T T G T T G T T G T T G T
rs248661545
MGI SNP Detail
Alliance Variant
Chr2:105629592 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1502 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215102359
MGI SNP Detail
Alliance Variant
Chr2:105629682 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1412 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582224665
MGI SNP Detail
Alliance Variant
Chr2:105629776 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1318 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238842849
MGI SNP Detail
Alliance Variant
Chr2:105629819 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1275 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262111993
MGI SNP Detail
Alliance Variant
Chr2:105629870 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1224 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27428921
MGI SNP Detail
Alliance Variant
Chr2:105629927 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1167 bp proximal
SNP A/T A A A A A T A A A A A A A A
rs27428920
MGI SNP Detail
Alliance Variant
Chr2:105630052 Elp4 Intron
Rr366618 within coordinates of
Rr562291 1042 bp proximal
SNP A/G A A A A A G A A A A A A A A
rs27428919
MGI SNP Detail
Alliance Variant
Chr2:105630226 Elp4 Intron
Rr562291 868 bp proximal
SNP A/C A A A A A C A A A A A A A A
rs222260211
MGI SNP Detail
Alliance Variant
Chr2:105630559 Elp4 Intron
Rr562291 535 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241947079
MGI SNP Detail
Alliance Variant
Chr2:105630560 Elp4 Intron
Rr562291 534 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251477978
MGI SNP Detail
Alliance Variant
Chr2:105630693 Elp4 Intron
Rr562291 401 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225531780
MGI SNP Detail
Alliance Variant
Chr2:105630977 Elp4 Intron
Rr562291 117 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27428918
MGI SNP Detail
Alliance Variant
Chr2:105631505 Elp4 Intron
Rr562291 within coordinates of
SNP A/G A A A A A G A A A A A A A A
rs265015619
MGI SNP Detail
Alliance Variant
Chr2:105631579 Elp4 Intron
Rr562291 22 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222994871
MGI SNP Detail
Alliance Variant
Chr2:105631726 Elp4 Intron
Rr562291 169 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236845340
MGI SNP Detail
Alliance Variant
Chr2:105631806 Elp4 Intron
Rr562291 249 bp distal
SNP A/C C C C C C C C C C C A A C C C C C C C A C A A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs256500829
MGI SNP Detail
Alliance Variant
Chr2:105631928 Elp4 Intron
Rr562291 371 bp distal
Rr562292 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228527629
MGI SNP Detail
Alliance Variant
Chr2:105631929 Elp4 Intron
Rr562291 372 bp distal
Rr562292 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27428917
MGI SNP Detail
Alliance Variant
Chr2:105631957 Elp4 Intron
Rr562291 400 bp distal
Rr562292 within coordinates of
SNP C/G C C C G G C C G C C G C
rs263093259
MGI SNP Detail
Alliance Variant
Chr2:105632181 Elp4 Intron
Rr562291 624 bp distal
Rr562292 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232946798
MGI SNP Detail
Alliance Variant
Chr2:105632189 Elp4 Intron
Rr562291 632 bp distal
Rr562292 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27428916
MGI SNP Detail
Alliance Variant
Chr2:105632208 Elp4 Intron
Rr562291 651 bp distal
Rr562292 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs215396016
MGI SNP Detail
Alliance Variant
Chr2:105632317 Elp4 Intron
Rr562291 760 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234881887
MGI SNP Detail
Alliance Variant
Chr2:105632343 Elp4 Intron
Rr562291 786 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27428915
MGI SNP Detail
Alliance Variant
Chr2:105632427 Elp4 Intron
Rr562291 870 bp distal
SNP C/T C C C C C T C C C C T C C T C
rs216780074
MGI SNP Detail
Alliance Variant
Chr2:105632434 Elp4 Intron
Rr562291 877 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235472087
MGI SNP Detail
Alliance Variant
Chr2:105632449 Elp4 Intron
Rr562291 892 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251572467
MGI SNP Detail
Alliance Variant
Chr2:105632477 Elp4 Intron
Rr562291 920 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584988866
MGI SNP Detail
Alliance Variant
Chr2:105632572 Elp4 Intron
Rr562291 1015 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51885161
MGI SNP Detail
Alliance Variant
Chr2:105632838 Elp4 Intron
Rr562291 1281 bp distal
SNP C/T T T T C C T C C T C T T T T T T T C C C C C C T C C T T C T T T T T T T C T T T T T C T T T C
rs238470332
MGI SNP Detail
Alliance Variant
Chr2:105632906 Elp4 Intron
Rr562291 1349 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs258151368
MGI SNP Detail
Alliance Variant
Chr2:105632939 Elp4 Intron
Rr562291 1382 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222857105
MGI SNP Detail
Alliance Variant
Chr2:105632940 Elp4 Intron
Rr562291 1383 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237011368
MGI SNP Detail
Alliance Variant
Chr2:105632953 Elp4 Intron
Rr562291 1396 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256465035
MGI SNP Detail
Alliance Variant
Chr2:105632961 Elp4 Intron
Rr562291 1404 bp distal
SNP C/T C C C C C C C C C C T T C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C T
rs222347319
MGI SNP Detail
Alliance Variant
Chr2:105633018 Elp4 Intron
Rr562291 1461 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242696959
MGI SNP Detail
Alliance Variant
Chr2:105633019 Elp4 Intron
Rr562291 1462 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265501497
MGI SNP Detail
Alliance Variant
Chr2:105633059 Elp4 Intron
Rr562291 1502 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232234996
MGI SNP Detail
Alliance Variant
Chr2:105633179 Elp4 Intron
Rr562291 1622 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs255061573
MGI SNP Detail
Alliance Variant
Chr2:105633252 Elp4 Intron
Rr562291 1695 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578879319
MGI SNP Detail
Alliance Variant
Chr2:105633315 Elp4 Intron
Rr562291 1758 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582898293
MGI SNP Detail
Alliance Variant
Chr2:105633325 Elp4 Intron
Rr562291 1768 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585852734
MGI SNP Detail
Alliance Variant
Chr2:105633341 Elp4 Intron
Rr562291 1784 bp distal
SNP A/G A A A A A A A A A A G A A A A A A A A A G G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580423494
MGI SNP Detail
Alliance Variant
Chr2:105633345 Elp4 Intron
Rr562291 1788 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581899028
MGI SNP Detail
Alliance Variant
Chr2:105633367 Elp4 Intron
Rr562291 1810 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585401043
MGI SNP Detail
Alliance Variant
Chr2:105633371 Elp4 Intron
Rr562291 1814 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579953190
MGI SNP Detail
Alliance Variant
Chr2:105633383 Elp4 Intron
Rr562291 1826 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262736148
MGI SNP Detail
Alliance Variant
Chr2:105633401 Elp4 Intron
Rr562291 1844 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223638991
MGI SNP Detail
Alliance Variant
Chr2:105633410 Elp4 Intron
Rr562291 1853 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243237886
MGI SNP Detail
Alliance Variant
Chr2:105633433 Elp4 Intron
Rr562291 1876 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216700445
MGI SNP Detail
Alliance Variant
Chr2:105633467 Elp4 Intron
Rr562291 1910 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235276854
MGI SNP Detail
Alliance Variant
Chr2:105633517 Elp4 Intron
Rr562291 1960 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252662100
MGI SNP Detail
Alliance Variant
Chr2:105633521 Elp4 Intron
Rr562291 1964 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217573963
MGI SNP Detail
Alliance Variant
Chr2:105633525 Elp4 Intron
Rr562291 1968 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236594150
MGI SNP Detail
Alliance Variant
Chr2:105633529 Elp4 Intron
Rr562291 1972 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 62 of 62

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory